Incidental Mutation 'R0366:Slit1'
ID |
36452 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Slit1
|
Ensembl Gene |
ENSMUSG00000025020 |
Gene Name |
slit guidance ligand 1 |
Synonyms |
Slil1 |
MMRRC Submission |
038572-MU
|
Accession Numbers |
|
Essential gene? |
Non essential
(E-score: 0.000)
|
Stock # |
R0366 (G1)
|
Quality Score |
225 |
Status
|
Validated
|
Chromosome |
19 |
Chromosomal Location |
41588696-41732104 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
T to A
at 41599470 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Tyrosine to Phenylalanine
at position 1027
(Y1027F)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000025993
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000025993]
[ENSMUST00000166496]
[ENSMUST00000169141]
|
AlphaFold |
Q80TR4 |
Predicted Effect |
probably damaging
Transcript: ENSMUST00000025993
AA Change: Y1027F
PolyPhen 2
Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
|
SMART Domains |
Protein: ENSMUSP00000025993 Gene: ENSMUSG00000025020 AA Change: Y1027F
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
32 |
N/A |
INTRINSIC |
LRRNT
|
33 |
65 |
5.68e-9 |
SMART |
LRR
|
59 |
83 |
4.58e1 |
SMART |
LRR
|
84 |
107 |
4.7e0 |
SMART |
LRR_TYP
|
108 |
131 |
1.95e-3 |
SMART |
LRR
|
133 |
155 |
6.05e0 |
SMART |
LRR
|
157 |
179 |
3.98e1 |
SMART |
LRR_TYP
|
180 |
203 |
3.44e-4 |
SMART |
LRRCT
|
215 |
264 |
3.51e-6 |
SMART |
LRRNT
|
281 |
313 |
3e-8 |
SMART |
LRR
|
307 |
331 |
6.41e1 |
SMART |
LRR_TYP
|
332 |
355 |
8.22e-2 |
SMART |
LRR_TYP
|
356 |
379 |
9.08e-4 |
SMART |
LRR
|
380 |
403 |
2.82e0 |
SMART |
LRR_TYP
|
404 |
427 |
5.42e-2 |
SMART |
LRRCT
|
439 |
488 |
5.78e-7 |
SMART |
LRRNT
|
512 |
544 |
1.04e-7 |
SMART |
LRR_TYP
|
564 |
587 |
3.39e-3 |
SMART |
LRR
|
589 |
611 |
2.08e1 |
SMART |
LRR_TYP
|
612 |
635 |
1.56e-2 |
SMART |
LRR_TYP
|
636 |
659 |
4.11e-2 |
SMART |
LRRCT
|
671 |
720 |
2.89e-7 |
SMART |
LRRNT
|
733 |
765 |
4.87e-8 |
SMART |
LRR
|
783 |
806 |
1.22e1 |
SMART |
LRR_TYP
|
807 |
830 |
9.73e-4 |
SMART |
LRR_TYP
|
831 |
854 |
9.58e-3 |
SMART |
LRRCT
|
866 |
915 |
5.6e-14 |
SMART |
EGF
|
928 |
962 |
5.08e-7 |
SMART |
EGF
|
967 |
1003 |
1.74e-5 |
SMART |
EGF_CA
|
1005 |
1041 |
1.05e-8 |
SMART |
EGF
|
1046 |
1081 |
1.21e-4 |
SMART |
EGF_CA
|
1083 |
1119 |
3.64e-8 |
SMART |
FOLN
|
1086 |
1108 |
8.44e0 |
SMART |
FOLN
|
1127 |
1149 |
1.4e0 |
SMART |
EGF
|
1127 |
1160 |
1.78e-2 |
SMART |
LamG
|
1183 |
1319 |
4.43e-38 |
SMART |
EGF
|
1338 |
1371 |
6.76e-3 |
SMART |
EGF
|
1377 |
1410 |
3.38e-3 |
SMART |
FOLN
|
1418 |
1440 |
2.25e1 |
SMART |
EGF
|
1418 |
1451 |
1.28e-3 |
SMART |
CT
|
1462 |
1531 |
3.15e-4 |
SMART |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000166496
AA Change: Y1027F
PolyPhen 2
Score 0.997 (Sensitivity: 0.41; Specificity: 0.98)
|
SMART Domains |
Protein: ENSMUSP00000128381 Gene: ENSMUSG00000025020 AA Change: Y1027F
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
32 |
N/A |
INTRINSIC |
LRRNT
|
33 |
65 |
5.68e-9 |
SMART |
LRR
|
59 |
83 |
4.58e1 |
SMART |
LRR
|
84 |
107 |
4.7e0 |
SMART |
LRR_TYP
|
108 |
131 |
1.95e-3 |
SMART |
LRR
|
133 |
155 |
6.05e0 |
SMART |
LRR
|
157 |
179 |
3.98e1 |
SMART |
LRR_TYP
|
180 |
203 |
3.44e-4 |
SMART |
LRRCT
|
215 |
264 |
3.51e-6 |
SMART |
LRRNT
|
281 |
313 |
3e-8 |
SMART |
LRR
|
307 |
331 |
6.41e1 |
SMART |
LRR_TYP
|
332 |
355 |
8.22e-2 |
SMART |
LRR_TYP
|
356 |
379 |
9.08e-4 |
SMART |
LRR
|
380 |
403 |
2.82e0 |
SMART |
LRR_TYP
|
404 |
427 |
5.42e-2 |
SMART |
LRRCT
|
439 |
488 |
5.78e-7 |
SMART |
LRRNT
|
512 |
544 |
1.04e-7 |
SMART |
LRR_TYP
|
564 |
587 |
3.39e-3 |
SMART |
LRR
|
589 |
611 |
2.08e1 |
SMART |
LRR_TYP
|
612 |
635 |
1.56e-2 |
SMART |
LRR_TYP
|
636 |
659 |
4.11e-2 |
SMART |
LRRCT
|
671 |
720 |
2.89e-7 |
SMART |
LRRNT
|
733 |
765 |
4.87e-8 |
SMART |
LRR
|
783 |
806 |
1.22e1 |
SMART |
LRR_TYP
|
807 |
830 |
9.73e-4 |
SMART |
LRR_TYP
|
831 |
854 |
9.58e-3 |
SMART |
LRRCT
|
866 |
915 |
5.6e-14 |
SMART |
EGF
|
928 |
962 |
5.08e-7 |
SMART |
EGF
|
967 |
1003 |
1.74e-5 |
SMART |
EGF_CA
|
1005 |
1041 |
1.05e-8 |
SMART |
EGF
|
1046 |
1081 |
1.21e-4 |
SMART |
EGF_CA
|
1083 |
1119 |
3.64e-8 |
SMART |
FOLN
|
1086 |
1108 |
8.44e0 |
SMART |
FOLN
|
1127 |
1149 |
1.4e0 |
SMART |
EGF
|
1127 |
1160 |
1.78e-2 |
SMART |
LamG
|
1183 |
1319 |
4.43e-38 |
SMART |
EGF
|
1338 |
1371 |
6.76e-3 |
SMART |
EGF
|
1377 |
1410 |
3.38e-3 |
SMART |
low complexity region
|
1437 |
1458 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000169141
AA Change: Y1027F
PolyPhen 2
Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
|
SMART Domains |
Protein: ENSMUSP00000129034 Gene: ENSMUSG00000025020 AA Change: Y1027F
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
32 |
N/A |
INTRINSIC |
LRRNT
|
33 |
65 |
5.68e-9 |
SMART |
LRR
|
59 |
83 |
4.58e1 |
SMART |
LRR
|
84 |
107 |
4.7e0 |
SMART |
LRR_TYP
|
108 |
131 |
1.95e-3 |
SMART |
LRR
|
133 |
155 |
6.05e0 |
SMART |
LRR
|
157 |
179 |
3.98e1 |
SMART |
LRR_TYP
|
180 |
203 |
3.44e-4 |
SMART |
LRRCT
|
215 |
264 |
3.51e-6 |
SMART |
LRRNT
|
281 |
313 |
3e-8 |
SMART |
LRR
|
307 |
331 |
6.41e1 |
SMART |
LRR_TYP
|
332 |
355 |
8.22e-2 |
SMART |
LRR_TYP
|
356 |
379 |
9.08e-4 |
SMART |
LRR
|
380 |
403 |
2.82e0 |
SMART |
LRR_TYP
|
404 |
427 |
5.42e-2 |
SMART |
LRRCT
|
439 |
488 |
5.78e-7 |
SMART |
LRRNT
|
512 |
544 |
1.04e-7 |
SMART |
LRR_TYP
|
564 |
587 |
3.39e-3 |
SMART |
LRR
|
589 |
611 |
2.08e1 |
SMART |
LRR_TYP
|
612 |
635 |
1.56e-2 |
SMART |
LRR_TYP
|
636 |
659 |
4.11e-2 |
SMART |
LRRCT
|
671 |
720 |
2.89e-7 |
SMART |
LRRNT
|
733 |
765 |
4.87e-8 |
SMART |
LRR
|
783 |
806 |
1.22e1 |
SMART |
LRR_TYP
|
807 |
830 |
9.73e-4 |
SMART |
LRR_TYP
|
831 |
854 |
9.58e-3 |
SMART |
LRRCT
|
866 |
915 |
5.6e-14 |
SMART |
EGF
|
928 |
962 |
5.08e-7 |
SMART |
EGF
|
967 |
1003 |
1.74e-5 |
SMART |
EGF_CA
|
1005 |
1041 |
1.05e-8 |
SMART |
EGF
|
1046 |
1081 |
1.21e-4 |
SMART |
EGF_CA
|
1083 |
1119 |
3.64e-8 |
SMART |
FOLN
|
1086 |
1108 |
8.44e0 |
SMART |
FOLN
|
1127 |
1149 |
1.4e0 |
SMART |
EGF
|
1127 |
1160 |
1.78e-2 |
SMART |
LamG
|
1183 |
1319 |
4.43e-38 |
SMART |
EGF
|
1338 |
1371 |
6.76e-3 |
SMART |
EGF
|
1377 |
1410 |
3.38e-3 |
SMART |
FOLN
|
1418 |
1440 |
2.25e1 |
SMART |
EGF
|
1418 |
1451 |
1.28e-3 |
SMART |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000169416
|
Meta Mutation Damage Score |
0.5620 |
Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.3%
- 10x: 96.1%
- 20x: 91.9%
|
Validation Efficiency |
99% (68/69) |
MGI Phenotype |
PHENOTYPE: Mice homozygous for a reporter allele exhibit normal interneuron numbers and morphology. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 67 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Abcc10 |
G |
T |
17: 46,635,724 (GRCm39) |
S93* |
probably null |
Het |
Ackr2 |
T |
C |
9: 121,738,426 (GRCm39) |
L267P |
probably damaging |
Het |
Adgre4 |
T |
A |
17: 56,099,001 (GRCm39) |
L169* |
probably null |
Het |
Ankrd12 |
T |
A |
17: 66,291,501 (GRCm39) |
S1311C |
possibly damaging |
Het |
Arid2 |
T |
A |
15: 96,259,601 (GRCm39) |
|
probably benign |
Het |
Atp9b |
A |
T |
18: 80,805,317 (GRCm39) |
V747E |
probably damaging |
Het |
Best1 |
T |
C |
19: 9,969,417 (GRCm39) |
|
probably null |
Het |
Brwd1 |
C |
A |
16: 95,839,164 (GRCm39) |
E836* |
probably null |
Het |
Cachd1 |
A |
G |
4: 100,851,934 (GRCm39) |
S1177G |
possibly damaging |
Het |
Cacna1e |
C |
T |
1: 154,291,884 (GRCm39) |
E1766K |
probably benign |
Het |
Cckar |
A |
G |
5: 53,857,507 (GRCm39) |
I301T |
probably benign |
Het |
Cdc27 |
T |
G |
11: 104,396,474 (GRCm39) |
T816P |
probably damaging |
Het |
Cep162 |
T |
G |
9: 87,102,537 (GRCm39) |
Q708H |
probably damaging |
Het |
Cep250 |
C |
A |
2: 155,830,321 (GRCm39) |
D1301E |
probably benign |
Het |
D430041D05Rik |
G |
A |
2: 104,085,685 (GRCm39) |
H955Y |
probably damaging |
Het |
Dcdc2a |
T |
A |
13: 25,240,417 (GRCm39) |
V55E |
probably damaging |
Het |
Efcab12 |
A |
G |
6: 115,800,209 (GRCm39) |
|
probably benign |
Het |
Ep400 |
A |
G |
5: 110,849,537 (GRCm39) |
V1428A |
unknown |
Het |
Erbb3 |
T |
C |
10: 128,408,439 (GRCm39) |
E825G |
possibly damaging |
Het |
Evl |
A |
T |
12: 108,652,307 (GRCm39) |
|
probably null |
Het |
Fuca2 |
G |
A |
10: 13,381,507 (GRCm39) |
R140H |
probably benign |
Het |
Gm5581 |
T |
C |
6: 131,143,410 (GRCm39) |
|
noncoding transcript |
Het |
Gm7052 |
T |
C |
17: 22,259,498 (GRCm39) |
|
probably benign |
Het |
Gpd1 |
T |
G |
15: 99,617,151 (GRCm39) |
I119S |
probably damaging |
Het |
Gzmc |
A |
T |
14: 56,470,193 (GRCm39) |
Y101* |
probably null |
Het |
Hmcn2 |
G |
T |
2: 31,314,218 (GRCm39) |
A3588S |
possibly damaging |
Het |
Ikbkb |
A |
G |
8: 23,185,276 (GRCm39) |
|
probably benign |
Het |
Itgax |
G |
T |
7: 127,748,261 (GRCm39) |
|
probably benign |
Het |
Kif24 |
C |
A |
4: 41,428,717 (GRCm39) |
S81I |
possibly damaging |
Het |
Lct |
G |
A |
1: 128,214,199 (GRCm39) |
P1858S |
probably benign |
Het |
Map2k1 |
C |
A |
9: 64,100,984 (GRCm39) |
|
probably null |
Het |
Mdga1 |
A |
G |
17: 30,076,682 (GRCm39) |
V30A |
possibly damaging |
Het |
Meiosin |
T |
A |
7: 18,840,964 (GRCm39) |
I57F |
probably damaging |
Het |
Mtcl1 |
G |
A |
17: 66,645,124 (GRCm39) |
P1441L |
probably damaging |
Het |
N4bp2 |
T |
A |
5: 65,963,739 (GRCm39) |
F596Y |
possibly damaging |
Het |
Notch4 |
A |
T |
17: 34,800,473 (GRCm39) |
|
probably benign |
Het |
Or2l5 |
A |
G |
16: 19,333,598 (GRCm39) |
S263P |
probably benign |
Het |
Or4c12 |
A |
C |
2: 89,774,162 (GRCm39) |
V99G |
possibly damaging |
Het |
Or6c1 |
A |
G |
10: 129,517,840 (GRCm39) |
M256T |
possibly damaging |
Het |
Or8b44 |
T |
A |
9: 38,410,450 (GRCm39) |
C162S |
possibly damaging |
Het |
Or8k25 |
A |
G |
2: 86,244,369 (GRCm39) |
V9A |
possibly damaging |
Het |
Pbld2 |
A |
G |
10: 62,889,736 (GRCm39) |
|
probably benign |
Het |
Phip |
T |
C |
9: 82,808,460 (GRCm39) |
Y505C |
probably damaging |
Het |
Plcb2 |
A |
G |
2: 118,554,928 (GRCm39) |
F58L |
probably benign |
Het |
Plcd1 |
T |
A |
9: 118,910,204 (GRCm39) |
I72F |
probably damaging |
Het |
Ppp5c |
A |
T |
7: 16,756,508 (GRCm39) |
Y63* |
probably null |
Het |
Prdm4 |
T |
C |
10: 85,743,868 (GRCm39) |
D129G |
probably damaging |
Het |
Prkcq |
C |
A |
2: 11,251,649 (GRCm39) |
|
probably benign |
Het |
Rab5b |
C |
T |
10: 128,518,772 (GRCm39) |
R120Q |
probably benign |
Het |
Rab7b |
T |
A |
1: 131,626,242 (GRCm39) |
V90D |
probably damaging |
Het |
Ripk3 |
T |
C |
14: 56,024,292 (GRCm39) |
T193A |
probably damaging |
Het |
Rnf167 |
C |
T |
11: 70,540,143 (GRCm39) |
R88* |
probably null |
Het |
Robo1 |
A |
G |
16: 72,539,133 (GRCm39) |
T59A |
possibly damaging |
Het |
Scd2 |
G |
A |
19: 44,289,685 (GRCm39) |
V227I |
probably benign |
Het |
Scg3 |
T |
A |
9: 75,582,620 (GRCm39) |
|
probably benign |
Het |
Sec31a |
A |
T |
5: 100,530,625 (GRCm39) |
L677H |
probably damaging |
Het |
Sema6a |
G |
A |
18: 47,423,112 (GRCm39) |
|
probably null |
Het |
Setd7 |
T |
C |
3: 51,457,741 (GRCm39) |
T29A |
probably benign |
Het |
Shoc1 |
A |
C |
4: 59,099,410 (GRCm39) |
M94R |
probably benign |
Het |
Slc4a5 |
A |
G |
6: 83,272,854 (GRCm39) |
Y942C |
probably benign |
Het |
Sptan1 |
G |
A |
2: 29,882,764 (GRCm39) |
|
probably null |
Het |
Tdrd12 |
T |
C |
7: 35,208,227 (GRCm39) |
Q249R |
probably benign |
Het |
Tmem171 |
T |
A |
13: 98,828,736 (GRCm39) |
D138V |
possibly damaging |
Het |
Ttll10 |
G |
A |
4: 156,119,612 (GRCm39) |
R596W |
probably damaging |
Het |
Usp53 |
G |
T |
3: 122,742,850 (GRCm39) |
N695K |
probably damaging |
Het |
Vmn2r25 |
A |
T |
6: 123,800,581 (GRCm39) |
L587* |
probably null |
Het |
Zglp1 |
C |
T |
9: 20,974,675 (GRCm39) |
C171Y |
probably benign |
Het |
|
Other mutations in Slit1 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00162:Slit1
|
APN |
19 |
41,639,274 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL00515:Slit1
|
APN |
19 |
41,612,940 (GRCm39) |
missense |
probably damaging |
0.97 |
IGL00909:Slit1
|
APN |
19 |
41,590,694 (GRCm39) |
missense |
possibly damaging |
0.89 |
IGL00953:Slit1
|
APN |
19 |
41,590,739 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01116:Slit1
|
APN |
19 |
41,594,824 (GRCm39) |
missense |
possibly damaging |
0.93 |
IGL01457:Slit1
|
APN |
19 |
41,599,483 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01688:Slit1
|
APN |
19 |
41,717,545 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01720:Slit1
|
APN |
19 |
41,622,653 (GRCm39) |
missense |
probably benign |
0.01 |
IGL01925:Slit1
|
APN |
19 |
41,596,817 (GRCm39) |
missense |
probably damaging |
0.98 |
IGL02008:Slit1
|
APN |
19 |
41,634,579 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL02312:Slit1
|
APN |
19 |
41,590,119 (GRCm39) |
missense |
possibly damaging |
0.66 |
IGL02398:Slit1
|
APN |
19 |
41,590,676 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02542:Slit1
|
APN |
19 |
41,615,687 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02559:Slit1
|
APN |
19 |
41,709,524 (GRCm39) |
missense |
probably benign |
0.01 |
IGL02609:Slit1
|
APN |
19 |
41,590,743 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL02623:Slit1
|
APN |
19 |
41,640,122 (GRCm39) |
missense |
probably damaging |
0.98 |
IGL02729:Slit1
|
APN |
19 |
41,591,773 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03230:Slit1
|
APN |
19 |
41,717,524 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03387:Slit1
|
APN |
19 |
41,591,881 (GRCm39) |
missense |
possibly damaging |
0.57 |
PIT4576001:Slit1
|
UTSW |
19 |
41,612,988 (GRCm39) |
missense |
possibly damaging |
0.52 |
R0432:Slit1
|
UTSW |
19 |
41,731,732 (GRCm39) |
missense |
probably damaging |
0.98 |
R0496:Slit1
|
UTSW |
19 |
41,596,750 (GRCm39) |
splice site |
probably benign |
|
R0722:Slit1
|
UTSW |
19 |
41,596,874 (GRCm39) |
missense |
probably damaging |
1.00 |
R1468:Slit1
|
UTSW |
19 |
41,596,823 (GRCm39) |
missense |
probably damaging |
1.00 |
R1468:Slit1
|
UTSW |
19 |
41,596,823 (GRCm39) |
missense |
probably damaging |
1.00 |
R1488:Slit1
|
UTSW |
19 |
41,596,824 (GRCm39) |
missense |
probably damaging |
1.00 |
R1615:Slit1
|
UTSW |
19 |
41,639,110 (GRCm39) |
splice site |
probably benign |
|
R1694:Slit1
|
UTSW |
19 |
41,626,031 (GRCm39) |
missense |
possibly damaging |
0.69 |
R1762:Slit1
|
UTSW |
19 |
41,591,774 (GRCm39) |
missense |
probably damaging |
1.00 |
R1842:Slit1
|
UTSW |
19 |
41,709,477 (GRCm39) |
critical splice donor site |
probably null |
|
R1844:Slit1
|
UTSW |
19 |
41,614,012 (GRCm39) |
missense |
probably damaging |
1.00 |
R1940:Slit1
|
UTSW |
19 |
41,619,215 (GRCm39) |
missense |
probably damaging |
1.00 |
R2087:Slit1
|
UTSW |
19 |
41,625,922 (GRCm39) |
missense |
probably benign |
0.00 |
R2094:Slit1
|
UTSW |
19 |
41,594,819 (GRCm39) |
missense |
probably damaging |
0.99 |
R2095:Slit1
|
UTSW |
19 |
41,594,819 (GRCm39) |
missense |
probably damaging |
0.99 |
R2104:Slit1
|
UTSW |
19 |
41,590,686 (GRCm39) |
missense |
possibly damaging |
0.69 |
R2305:Slit1
|
UTSW |
19 |
41,599,455 (GRCm39) |
missense |
probably benign |
0.03 |
R2972:Slit1
|
UTSW |
19 |
41,599,455 (GRCm39) |
missense |
probably benign |
0.03 |
R2973:Slit1
|
UTSW |
19 |
41,599,455 (GRCm39) |
missense |
probably benign |
0.03 |
R2974:Slit1
|
UTSW |
19 |
41,599,455 (GRCm39) |
missense |
probably benign |
0.03 |
R3159:Slit1
|
UTSW |
19 |
41,592,812 (GRCm39) |
missense |
probably benign |
|
R3752:Slit1
|
UTSW |
19 |
41,635,406 (GRCm39) |
critical splice donor site |
probably null |
|
R4095:Slit1
|
UTSW |
19 |
41,596,925 (GRCm39) |
intron |
probably benign |
|
R4282:Slit1
|
UTSW |
19 |
41,602,856 (GRCm39) |
missense |
probably benign |
|
R4417:Slit1
|
UTSW |
19 |
41,602,908 (GRCm39) |
missense |
probably damaging |
1.00 |
R4607:Slit1
|
UTSW |
19 |
41,605,232 (GRCm39) |
missense |
probably benign |
0.10 |
R4729:Slit1
|
UTSW |
19 |
41,635,459 (GRCm39) |
missense |
probably damaging |
1.00 |
R4756:Slit1
|
UTSW |
19 |
41,637,452 (GRCm39) |
missense |
probably damaging |
1.00 |
R4764:Slit1
|
UTSW |
19 |
41,709,483 (GRCm39) |
nonsense |
probably null |
|
R4849:Slit1
|
UTSW |
19 |
41,637,983 (GRCm39) |
missense |
probably benign |
0.17 |
R4874:Slit1
|
UTSW |
19 |
41,717,493 (GRCm39) |
critical splice donor site |
probably null |
|
R5581:Slit1
|
UTSW |
19 |
41,605,102 (GRCm39) |
critical splice donor site |
probably null |
|
R5699:Slit1
|
UTSW |
19 |
41,613,959 (GRCm39) |
critical splice donor site |
probably null |
|
R5888:Slit1
|
UTSW |
19 |
41,731,735 (GRCm39) |
missense |
probably damaging |
1.00 |
R5906:Slit1
|
UTSW |
19 |
41,594,813 (GRCm39) |
missense |
probably damaging |
1.00 |
R6176:Slit1
|
UTSW |
19 |
41,626,034 (GRCm39) |
missense |
probably damaging |
1.00 |
R6277:Slit1
|
UTSW |
19 |
41,588,948 (GRCm39) |
missense |
possibly damaging |
0.81 |
R6702:Slit1
|
UTSW |
19 |
41,603,309 (GRCm39) |
missense |
possibly damaging |
0.95 |
R6860:Slit1
|
UTSW |
19 |
41,605,154 (GRCm39) |
missense |
probably benign |
0.10 |
R7015:Slit1
|
UTSW |
19 |
41,618,325 (GRCm39) |
nonsense |
probably null |
|
R7172:Slit1
|
UTSW |
19 |
41,623,105 (GRCm39) |
missense |
probably damaging |
1.00 |
R7512:Slit1
|
UTSW |
19 |
41,589,074 (GRCm39) |
missense |
probably damaging |
1.00 |
R7568:Slit1
|
UTSW |
19 |
41,590,074 (GRCm39) |
missense |
probably damaging |
1.00 |
R7614:Slit1
|
UTSW |
19 |
41,622,639 (GRCm39) |
missense |
probably damaging |
1.00 |
R7650:Slit1
|
UTSW |
19 |
41,618,363 (GRCm39) |
missense |
probably damaging |
1.00 |
R7687:Slit1
|
UTSW |
19 |
41,639,128 (GRCm39) |
missense |
probably benign |
0.03 |
R7732:Slit1
|
UTSW |
19 |
41,592,847 (GRCm39) |
missense |
probably benign |
0.01 |
R7947:Slit1
|
UTSW |
19 |
41,599,248 (GRCm39) |
missense |
probably benign |
|
R7947:Slit1
|
UTSW |
19 |
41,599,247 (GRCm39) |
missense |
probably damaging |
1.00 |
R8171:Slit1
|
UTSW |
19 |
41,715,512 (GRCm39) |
missense |
probably damaging |
0.97 |
R8217:Slit1
|
UTSW |
19 |
41,612,959 (GRCm39) |
missense |
possibly damaging |
0.60 |
R8355:Slit1
|
UTSW |
19 |
41,634,473 (GRCm39) |
missense |
probably damaging |
1.00 |
R9025:Slit1
|
UTSW |
19 |
41,612,968 (GRCm39) |
missense |
probably benign |
0.01 |
R9124:Slit1
|
UTSW |
19 |
41,594,951 (GRCm39) |
missense |
probably benign |
0.02 |
R9288:Slit1
|
UTSW |
19 |
41,613,144 (GRCm39) |
intron |
probably benign |
|
R9343:Slit1
|
UTSW |
19 |
41,615,737 (GRCm39) |
missense |
probably damaging |
1.00 |
R9435:Slit1
|
UTSW |
19 |
41,591,764 (GRCm39) |
critical splice donor site |
probably null |
|
R9563:Slit1
|
UTSW |
19 |
41,596,874 (GRCm39) |
missense |
probably damaging |
1.00 |
R9564:Slit1
|
UTSW |
19 |
41,591,861 (GRCm39) |
missense |
probably benign |
0.16 |
R9595:Slit1
|
UTSW |
19 |
41,637,851 (GRCm39) |
missense |
probably damaging |
1.00 |
R9667:Slit1
|
UTSW |
19 |
41,731,832 (GRCm39) |
nonsense |
probably null |
|
X0023:Slit1
|
UTSW |
19 |
41,590,079 (GRCm39) |
missense |
probably benign |
|
|
Predicted Primers |
PCR Primer
(F):5'- ACATTGGGCCTCATGCTGACAC -3'
(R):5'- TGGTCTCCAACACCAGACTGCAAG -3'
Sequencing Primer
(F):5'- ATGCTGACACGGGTTCATATC -3'
(R):5'- gtcaccctttaatctgtttgcc -3'
|
Posted On |
2013-05-09 |