Incidental Mutation 'R0378:Vmn1r5'
ID36463
Institutional Source Beutler Lab
Gene Symbol Vmn1r5
Ensembl Gene ENSMUSG00000090346
Gene Namevomeronasal 1 receptor 5
SynonymsV1rc19
MMRRC Submission 038584-MU
Accession Numbers
Is this an essential gene? Probably non essential (E-score: 0.052) question?
Stock #R0378 (G1)
Quality Score225
Status Validated
Chromosome6
Chromosomal Location56970273-56988390 bp(+) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) A to T at 56985585 bp
ZygosityHeterozygous
Amino Acid Change Isoleucine to Leucine at position 82 (I82L)
Ref Sequence ENSEMBL: ENSMUSP00000154081 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000164307] [ENSMUST00000226130] [ENSMUST00000228276]
Predicted Effect probably benign
Transcript: ENSMUST00000164307
AA Change: I82L

PolyPhen 2 Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)
SMART Domains Protein: ENSMUSP00000131092
Gene: ENSMUSG00000090346
AA Change: I82L

DomainStartEndE-ValueType
Pfam:V1R 28 293 9.7e-53 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000226130
AA Change: I82L

PolyPhen 2 Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)
Predicted Effect probably benign
Transcript: ENSMUST00000228276
AA Change: I82L

PolyPhen 2 Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)
Meta Mutation Damage Score 0.0898 question?
Coding Region Coverage
  • 1x: 99.4%
  • 3x: 98.7%
  • 10x: 97.0%
  • 20x: 94.8%
Validation Efficiency 95% (40/42)
Allele List at MGI
Other mutations in this stock
Total: 41 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Adamts18 C A 8: 113,743,117 R651L probably damaging Het
Amd1 T C 10: 40,289,384 D317G possibly damaging Het
Artn A G 4: 117,927,618 probably benign Het
Asna1 A T 8: 85,025,264 M1K probably null Het
Bub1b T A 2: 118,641,123 V988E probably benign Het
Cyp2c65 G T 19: 39,073,218 C216F probably benign Het
Cyp3a11 T C 5: 145,868,607 E200G probably benign Het
Cyp3a25 T A 5: 145,986,842 K330N probably damaging Het
Duox2 C A 2: 122,284,583 V1138L probably benign Het
Erc2 A G 14: 28,011,694 D567G probably damaging Het
Eri2 A G 7: 119,793,916 probably null Het
Foxa3 A G 7: 19,023,369 Y17H probably damaging Het
Fto T C 8: 91,474,312 S324P probably damaging Het
Gls2 T G 10: 128,207,311 L457R probably benign Het
Gstcd A T 3: 132,986,408 L582H probably damaging Het
Gtf3c1 G A 7: 125,647,614 R1508* probably null Het
Kif21a T C 15: 90,969,774 probably null Het
Klra5 A T 6: 129,906,614 D93E possibly damaging Het
Lgr5 T C 10: 115,454,499 D456G probably damaging Het
Mau2 A G 8: 70,030,655 S186P probably damaging Het
Msr1 T C 8: 39,589,382 D384G possibly damaging Het
Mum1 C A 10: 80,238,879 probably null Het
Ncf4 T C 15: 78,253,303 V93A probably damaging Het
Oas1f T G 5: 120,856,426 C337G probably damaging Het
Olfr119 A G 17: 37,701,041 M124V probably damaging Het
Olfr482 A T 7: 108,095,222 F116Y probably benign Het
Olfr820 T A 10: 130,018,003 L214H probably damaging Het
Rasl10b T C 11: 83,418,693 S159P probably damaging Het
Sephs1 A G 2: 4,899,560 T250A probably benign Het
Smg8 C A 11: 87,080,423 D841Y probably damaging Het
Sox7 T C 14: 63,943,949 V65A probably damaging Het
Sp140 C T 1: 85,620,051 probably benign Het
Srsf10 A G 4: 135,863,190 Y142C possibly damaging Het
Tcam1 G A 11: 106,284,078 E120K probably benign Het
Tcerg1l A G 7: 138,276,655 V326A probably benign Het
Tcl1b5 T A 12: 105,179,067 W97R probably damaging Het
Tmem108 T C 9: 103,499,657 R198G possibly damaging Het
Ube2ql1 T A 13: 69,738,898 Q148L possibly damaging Het
Wdr6 A T 9: 108,575,864 S273R probably damaging Het
Ylpm1 C T 12: 84,997,076 probably benign Het
Zfp90 G A 8: 106,425,506 R617Q possibly damaging Het
Other mutations in Vmn1r5
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01674:Vmn1r5 APN 6 56985926 missense probably damaging 0.98
IGL02027:Vmn1r5 APN 6 56985655 missense probably damaging 0.97
IGL03133:Vmn1r5 APN 6 56985615 missense probably benign 0.10
IGL03412:Vmn1r5 APN 6 56985933 missense possibly damaging 0.90
R0316:Vmn1r5 UTSW 6 56985799 missense probably benign 0.27
R0946:Vmn1r5 UTSW 6 56986165 missense possibly damaging 0.64
R1511:Vmn1r5 UTSW 6 56985786 missense probably benign 0.02
R1553:Vmn1r5 UTSW 6 56985498 missense probably benign 0.00
R1823:Vmn1r5 UTSW 6 56985595 missense probably damaging 0.98
R3980:Vmn1r5 UTSW 6 56985651 missense probably damaging 1.00
R4473:Vmn1r5 UTSW 6 56985648 missense probably benign 0.01
R4742:Vmn1r5 UTSW 6 56986251 nonsense probably null
R5321:Vmn1r5 UTSW 6 56985607 missense probably damaging 1.00
R5364:Vmn1r5 UTSW 6 56985598 missense probably damaging 0.98
R6102:Vmn1r5 UTSW 6 56986114 missense probably damaging 0.96
R6581:Vmn1r5 UTSW 6 56985381 missense probably benign
R6885:Vmn1r5 UTSW 6 56986057 missense possibly damaging 0.89
R7297:Vmn1r5 UTSW 6 56986219 missense possibly damaging 0.94
R8063:Vmn1r5 UTSW 6 56985598 missense probably damaging 0.98
Z1176:Vmn1r5 UTSW 6 56985948 missense possibly damaging 0.75
Predicted Primers PCR Primer
(F):5'- TAGGTCACAGACGTAAGCCCACAG -3'
(R):5'- GCTATGAAGATGCTTGCATTGCCTC -3'

Sequencing Primer
(F):5'- AGACCTGATCTCCTGTCAACTG -3'
(R):5'- GGTCTCACTCACATTGGTATAAGC -3'
Posted On2013-05-09