Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL02956:Lmod2'

365116

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Lmod2

Ensembl Gene

ENSMUSG00000029683

Gene Name

leiomodin 2 (cardiac)

Synonyms

C-Lmod

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.114) question?

Stock #

IGL02956

Quality Score

Status

Chromosome

Chromosomal Location

24597770-24605413 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to C at 24603631 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Asparagine to Threonine at position 202 (N202T)

Ref Sequence

ENSEMBL: ENSMUSP00000031694 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000031694]

AlphaFold

Q3UHZ5

Predicted Effect

probably damaging
Transcript: ENSMUST00000031694
AA Change: N202T

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)

SMART Domains

Protein: ENSMUSP00000031694
Gene: ENSMUSG00000029683
AA Change: N202T

Domain	Start	End	E-Value	Type
Pfam:Tropomodulin	6	153	9.7e-19	PFAM
PDB:1IO0\|A	202	360	5e-45	PDB
low complexity region	361	374	N/A	INTRINSIC
low complexity region	403	414	N/A	INTRINSIC
low complexity region	421	453	N/A	INTRINSIC
low complexity region	482	490	N/A	INTRINSIC

Coding Region Coverage

Validation Efficiency

MGI Phenotype

PHENOTYPE: Homozygous disruption of this gene results in thin filaments in the heart, cardiac contractile dysfunction, abnormal myocardial fiber ultrastucture, dilated cardiomyopathy, and premature death. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 46 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Adamts13	C	T	2: 26,873,049 (GRCm39)	A339V	probably benign	Het
Adck2	T	C	6: 39,553,436 (GRCm39)	V349A	probably benign	Het
Akna	G	T	4: 63,304,516 (GRCm39)	T546K	probably benign	Het
Albfm1	A	G	5: 90,727,497 (GRCm39)	I372V	possibly damaging	Het
Ankrd29	T	C	18: 12,393,993 (GRCm39)	K274E	probably damaging	Het
Apc2	A	T	10: 80,142,209 (GRCm39)	N376I	probably damaging	Het
Cadps	A	G	14: 12,418,047 (GRCm38)		probably benign	Het
Cbl	T	C	9: 44,080,331 (GRCm39)	T243A	probably damaging	Het
Cep15	A	G	14: 12,287,326 (GRCm38)	N29S	probably benign	Het
Cfap52	T	C	11: 67,844,901 (GRCm39)	E56G	probably benign	Het
Chd5	C	A	4: 152,464,413 (GRCm39)	P1561Q	probably benign	Het
Dscam	A	G	16: 96,602,472 (GRCm39)	S657P	probably damaging	Het
Ece1	T	C	4: 137,690,149 (GRCm39)	F732L	probably damaging	Het
Eno2	T	C	6: 124,740,082 (GRCm39)	D199G	probably damaging	Het
Enpp3	A	G	10: 24,650,841 (GRCm39)		probably benign	Het
Fbxl15	G	T	19: 46,317,690 (GRCm39)	C124F	probably damaging	Het
Fermt3	T	C	19: 6,979,712 (GRCm39)	S474G	probably benign	Het
Fkbp6	T	C	5: 135,368,350 (GRCm39)	E252G	probably damaging	Het
Gm6625	A	T	8: 89,873,667 (GRCm39)		noncoding transcript	Het
Gnl1	T	C	17: 36,298,504 (GRCm39)	I416T	probably benign	Het
Gp1bb	C	A	16: 18,439,675 (GRCm39)	A140S	probably benign	Het
Grin2c	A	G	11: 115,148,785 (GRCm39)	V271A	possibly damaging	Het
Heatr1	T	A	13: 12,430,940 (GRCm39)	S1012T	possibly damaging	Het
Ighv5-6	T	A	12: 113,589,523 (GRCm39)		probably benign	Het
Itga10	A	G	3: 96,562,429 (GRCm39)	E737G	possibly damaging	Het
Lrp1	C	T	10: 127,380,428 (GRCm39)	V3908I	probably benign	Het
Lrrtm4	T	C	6: 79,998,633 (GRCm39)	V15A	probably benign	Het
Mup4	A	T	4: 59,959,263 (GRCm39)	D77E	probably benign	Het
Myh7b	A	T	2: 155,474,823 (GRCm39)	E1787V	probably damaging	Het
Myh7b	T	A	2: 155,467,874 (GRCm39)	M804K	possibly damaging	Het
Nup133	T	C	8: 124,675,822 (GRCm39)	S32G	probably benign	Het
Or13c7d	T	A	4: 43,770,399 (GRCm39)	N204I	probably benign	Het
Or52h1	T	C	7: 103,829,334 (GRCm39)	I94V	probably damaging	Het
Or7d10	T	C	9: 19,832,348 (GRCm39)	V281A	possibly damaging	Het
Or8b8	A	G	9: 37,809,404 (GRCm39)	K235E	probably damaging	Het
Polr2m	T	C	9: 71,390,911 (GRCm39)	D97G	possibly damaging	Het
Pou2f3	A	G	9: 43,054,100 (GRCm39)		probably benign	Het
Rex1bd	C	A	8: 70,958,552 (GRCm39)	V72F	possibly damaging	Het
Rgp1	A	G	4: 43,581,505 (GRCm39)	T261A	possibly damaging	Het
Satb2	A	G	1: 56,987,334 (GRCm39)	F84L	probably damaging	Het
Sec14l1	G	A	11: 117,043,973 (GRCm39)	D494N	probably benign	Het
Spn	G	A	7: 126,736,432 (GRCm39)	T25M	probably damaging	Het
Trp73	G	A	4: 154,148,920 (GRCm39)		probably benign	Het
Tsc22d2	A	G	3: 58,324,967 (GRCm39)	T620A	unknown	Het
Zfp276	T	C	8: 123,981,483 (GRCm39)	L10P	probably damaging	Het
Zfp93	T	A	7: 23,974,400 (GRCm39)	N128K	probably benign	Het

Other mutations in Lmod2

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00340:Lmod2	APN	6	24,598,051 (GRCm39)	missense	probably damaging	1.00
IGL01013:Lmod2	APN	6	24,604,134 (GRCm39)	missense	probably damaging	0.98
IGL02164:Lmod2	APN	6	24,603,909 (GRCm39)	missense	possibly damaging	0.89
IGL02328:Lmod2	APN	6	24,603,832 (GRCm39)	missense	probably benign	0.00
IGL03213:Lmod2	APN	6	24,603,615 (GRCm39)	missense	possibly damaging	0.88
IGL03351:Lmod2	APN	6	24,598,015 (GRCm39)	missense	probably benign	0.00
P0035:Lmod2	UTSW	6	24,597,885 (GRCm39)	missense	probably damaging	1.00
R1764:Lmod2	UTSW	6	24,603,376 (GRCm39)	missense	probably damaging	0.99
R3104:Lmod2	UTSW	6	24,604,471 (GRCm39)	missense	probably damaging	1.00
R3955:Lmod2	UTSW	6	24,603,870 (GRCm39)	missense	probably benign	0.02
R4410:Lmod2	UTSW	6	24,604,629 (GRCm39)	missense	probably damaging	1.00
R4876:Lmod2	UTSW	6	24,604,278 (GRCm39)	missense	probably benign	0.06
R4957:Lmod2	UTSW	6	24,603,871 (GRCm39)	missense	possibly damaging	0.63
R5509:Lmod2	UTSW	6	24,603,888 (GRCm39)	missense	probably damaging	1.00
R5655:Lmod2	UTSW	6	24,603,853 (GRCm39)	missense	possibly damaging	0.65
R6114:Lmod2	UTSW	6	24,603,691 (GRCm39)	missense	probably damaging	1.00
R6462:Lmod2	UTSW	6	24,604,300 (GRCm39)	missense	probably benign	0.06
R6834:Lmod2	UTSW	6	24,597,782 (GRCm39)	start gained	probably benign
R6869:Lmod2	UTSW	6	24,604,126 (GRCm39)	missense	probably benign	0.06
R6909:Lmod2	UTSW	6	24,604,157 (GRCm39)	missense	probably benign	0.00
R6918:Lmod2	UTSW	6	24,603,594 (GRCm39)	missense	probably benign	0.23
R7352:Lmod2	UTSW	6	24,598,110 (GRCm39)	missense	possibly damaging	0.84
R7425:Lmod2	UTSW	6	24,603,475 (GRCm39)	missense	probably benign
R7476:Lmod2	UTSW	6	24,597,920 (GRCm39)	nonsense	probably null
R7986:Lmod2	UTSW	6	24,603,448 (GRCm39)	missense	possibly damaging	0.65
R8417:Lmod2	UTSW	6	24,603,384 (GRCm39)	missense	possibly damaging	0.71
R9063:Lmod2	UTSW	6	24,603,364 (GRCm39)	missense	probably benign	0.01
R9286:Lmod2	UTSW	6	24,603,712 (GRCm39)	missense	probably damaging	1.00
R9326:Lmod2	UTSW	6	24,597,999 (GRCm39)	missense	probably damaging	1.00
R9461:Lmod2	UTSW	6	24,603,568 (GRCm39)	missense	probably benign	0.01
R9716:Lmod2	UTSW	6	24,604,182 (GRCm39)	missense	possibly damaging	0.83
R9780:Lmod2	UTSW	6	24,604,233 (GRCm39)	missense	probably damaging	1.00

Posted On

2015-12-18