Incidental Mutation 'IGL02958:Vmn1r43'
ID 365205
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Vmn1r43
Ensembl Gene ENSMUSG00000068231
Gene Name vomeronasal 1 receptor 43
Synonyms V1ra5
Accession Numbers
Essential gene? Probably non essential (E-score: 0.054) question?
Stock # IGL02958
Quality Score
Status
Chromosome 6
Chromosomal Location 89846443-89847511 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to C at 89847031 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Isoleucine to Valine at position 152 (I152V)
Ref Sequence ENSEMBL: ENSMUSP00000154510 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000089418] [ENSMUST00000226741] [ENSMUST00000226983] [ENSMUST00000227279] [ENSMUST00000228709]
AlphaFold Q8VIC9
Predicted Effect probably benign
Transcript: ENSMUST00000089418
AA Change: I152V

PolyPhen 2 Score 0.085 (Sensitivity: 0.93; Specificity: 0.85)
SMART Domains Protein: ENSMUSP00000086839
Gene: ENSMUSG00000068231
AA Change: I152V

DomainStartEndE-ValueType
Pfam:V1R 54 318 2.9e-126 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000226240
Predicted Effect probably benign
Transcript: ENSMUST00000226741
AA Change: I152V

PolyPhen 2 Score 0.085 (Sensitivity: 0.93; Specificity: 0.85)
Predicted Effect probably benign
Transcript: ENSMUST00000226983
AA Change: I152V

PolyPhen 2 Score 0.085 (Sensitivity: 0.93; Specificity: 0.85)
Predicted Effect probably benign
Transcript: ENSMUST00000227279
Predicted Effect probably benign
Transcript: ENSMUST00000228709
AA Change: I152V

PolyPhen 2 Score 0.085 (Sensitivity: 0.93; Specificity: 0.85)
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 42 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Aars2 G T 17: 45,829,098 (GRCm39) V755L probably benign Het
Abhd15 T C 11: 77,406,791 (GRCm39) V256A possibly damaging Het
Agtr1b A T 3: 20,370,258 (GRCm39) V116E possibly damaging Het
Ahi1 A T 10: 20,839,698 (GRCm39) D203V probably damaging Het
Aplp2 G T 9: 31,075,972 (GRCm39) probably benign Het
Arid4a T C 12: 71,144,337 (GRCm39) S1249P probably benign Het
Asz1 T A 6: 18,073,813 (GRCm39) K298M possibly damaging Het
C4bp A G 1: 130,564,532 (GRCm39) I384T probably damaging Het
Cacna1e C A 1: 154,341,487 (GRCm39) A1236S probably damaging Het
Cdh13 T C 8: 120,039,460 (GRCm39) I634T possibly damaging Het
Cemip A T 7: 83,624,263 (GRCm39) F524L probably damaging Het
Dnah7c G A 1: 46,696,271 (GRCm39) R2051H probably damaging Het
Dnajc17 T C 2: 119,016,243 (GRCm39) K77E probably benign Het
Efhc2 C T X: 17,027,485 (GRCm39) probably benign Het
Ergic2 A T 6: 148,083,441 (GRCm39) *50K probably null Het
Fam83g C T 11: 61,598,548 (GRCm39) P812S probably damaging Het
Flg2 C T 3: 93,110,920 (GRCm39) R983W unknown Het
Itih3 T C 14: 30,635,139 (GRCm39) T73A probably benign Het
Kcnj1 A G 9: 32,307,851 (GRCm39) S72G probably damaging Het
Kcnn4 T C 7: 24,074,170 (GRCm39) V78A probably benign Het
Lrp1b T A 2: 41,192,928 (GRCm39) D1353V probably damaging Het
Lrrc2 T A 9: 110,791,741 (GRCm39) probably null Het
Mplkipl1 G T 19: 61,164,118 (GRCm39) Q106K possibly damaging Het
Ndufs8 T C 19: 3,961,232 (GRCm39) E45G probably benign Het
Nell1 G A 7: 49,870,085 (GRCm39) probably null Het
Nxt1 A G 2: 148,517,692 (GRCm39) probably benign Het
Or2y17 A G 11: 49,232,127 (GRCm39) Y256C probably benign Het
Or5al5 T A 2: 85,961,351 (GRCm39) I219F probably benign Het
Pdzd8 A T 19: 59,288,804 (GRCm39) C865* probably null Het
Pop1 G T 15: 34,530,509 (GRCm39) C969F probably damaging Het
Rc3h2 A C 2: 37,304,712 (GRCm39) I16S probably damaging Het
Shank1 T C 7: 44,003,897 (GRCm39) V1863A possibly damaging Het
Slc15a4 A T 5: 127,681,729 (GRCm39) L296Q possibly damaging Het
Spmip1 G A 6: 29,471,625 (GRCm39) G34R probably damaging Het
Ssr4 T C X: 72,830,856 (GRCm39) probably benign Het
Supt20 T A 3: 54,621,144 (GRCm39) probably benign Het
Ttc8 A T 12: 98,930,803 (GRCm39) K282N probably benign Het
Usp40 A T 1: 87,906,207 (GRCm39) V676E probably damaging Het
Vmn2r61 A T 7: 41,949,361 (GRCm39) I594F probably benign Het
Vps53 A C 11: 76,008,537 (GRCm39) I261S probably damaging Het
Wdr19 T A 5: 65,370,150 (GRCm39) probably null Het
Zc3hav1 T A 6: 38,309,919 (GRCm39) D301V probably damaging Het
Other mutations in Vmn1r43
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01748:Vmn1r43 APN 6 89,847,294 (GRCm39) missense probably damaging 1.00
IGL02476:Vmn1r43 APN 6 89,847,043 (GRCm39) missense possibly damaging 0.95
R0413:Vmn1r43 UTSW 6 89,846,830 (GRCm39) missense probably damaging 1.00
R1662:Vmn1r43 UTSW 6 89,846,572 (GRCm39) missense possibly damaging 0.76
R1668:Vmn1r43 UTSW 6 89,846,683 (GRCm39) missense probably benign 0.01
R4419:Vmn1r43 UTSW 6 89,846,629 (GRCm39) missense probably benign 0.01
R4719:Vmn1r43 UTSW 6 89,846,837 (GRCm39) missense probably benign 0.02
R4798:Vmn1r43 UTSW 6 89,846,892 (GRCm39) missense probably benign 0.01
R5520:Vmn1r43 UTSW 6 89,846,728 (GRCm39) missense probably damaging 0.98
R5643:Vmn1r43 UTSW 6 89,847,354 (GRCm39) missense probably damaging 1.00
R5644:Vmn1r43 UTSW 6 89,847,354 (GRCm39) missense probably damaging 1.00
R5717:Vmn1r43 UTSW 6 89,846,905 (GRCm39) missense probably damaging 1.00
R6647:Vmn1r43 UTSW 6 89,846,841 (GRCm39) missense probably damaging 1.00
R6914:Vmn1r43 UTSW 6 89,847,319 (GRCm39) missense probably benign 0.02
R6942:Vmn1r43 UTSW 6 89,847,319 (GRCm39) missense probably benign 0.02
R7092:Vmn1r43 UTSW 6 89,846,885 (GRCm39) missense probably benign 0.02
R7402:Vmn1r43 UTSW 6 89,846,803 (GRCm39) missense probably benign 0.02
R7457:Vmn1r43 UTSW 6 89,847,172 (GRCm39) missense probably damaging 0.98
R7572:Vmn1r43 UTSW 6 89,846,547 (GRCm39) missense possibly damaging 0.93
R7807:Vmn1r43 UTSW 6 89,847,219 (GRCm39) missense probably benign 0.07
R8406:Vmn1r43 UTSW 6 89,847,414 (GRCm39) missense possibly damaging 0.55
R8696:Vmn1r43 UTSW 6 89,847,321 (GRCm39) missense probably damaging 0.99
R8859:Vmn1r43 UTSW 6 89,846,937 (GRCm39) missense probably damaging 1.00
R8894:Vmn1r43 UTSW 6 89,846,746 (GRCm39) missense probably benign 0.02
R9072:Vmn1r43 UTSW 6 89,846,877 (GRCm39) missense probably damaging 1.00
R9073:Vmn1r43 UTSW 6 89,846,877 (GRCm39) missense probably damaging 1.00
R9075:Vmn1r43 UTSW 6 89,846,877 (GRCm39) missense probably damaging 1.00
R9076:Vmn1r43 UTSW 6 89,846,877 (GRCm39) missense probably damaging 1.00
R9237:Vmn1r43 UTSW 6 89,846,877 (GRCm39) missense probably damaging 1.00
R9239:Vmn1r43 UTSW 6 89,846,877 (GRCm39) missense probably damaging 1.00
R9240:Vmn1r43 UTSW 6 89,846,877 (GRCm39) missense probably damaging 1.00
R9293:Vmn1r43 UTSW 6 89,846,877 (GRCm39) missense probably damaging 1.00
R9383:Vmn1r43 UTSW 6 89,846,552 (GRCm39) missense possibly damaging 0.94
R9398:Vmn1r43 UTSW 6 89,846,877 (GRCm39) missense probably damaging 1.00
R9399:Vmn1r43 UTSW 6 89,846,877 (GRCm39) missense probably damaging 1.00
R9401:Vmn1r43 UTSW 6 89,846,877 (GRCm39) missense probably damaging 1.00
R9402:Vmn1r43 UTSW 6 89,846,877 (GRCm39) missense probably damaging 1.00
R9594:Vmn1r43 UTSW 6 89,846,877 (GRCm39) missense probably damaging 1.00
R9595:Vmn1r43 UTSW 6 89,846,877 (GRCm39) missense probably damaging 1.00
R9596:Vmn1r43 UTSW 6 89,846,877 (GRCm39) missense probably damaging 1.00
R9624:Vmn1r43 UTSW 6 89,846,877 (GRCm39) missense probably damaging 1.00
R9628:Vmn1r43 UTSW 6 89,846,877 (GRCm39) missense probably damaging 1.00
R9656:Vmn1r43 UTSW 6 89,847,440 (GRCm39) missense possibly damaging 0.47
X0020:Vmn1r43 UTSW 6 89,847,316 (GRCm39) missense probably benign 0.00
Z1177:Vmn1r43 UTSW 6 89,847,467 (GRCm39) missense probably benign 0.00
Posted On 2015-12-18