Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL02958:Pdzd8'

365223

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Pdzd8

Ensembl Gene

ENSMUSG00000074746

Gene Name

PDZ domain containing 8

Synonyms

Pdzk8, A630041P07Rik

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

IGL02958

Quality Score

Status

Chromosome

Chromosomal Location

59285610-59334212 bp(-) (GRCm39)

Type of Mutation

nonsense

DNA Base Change (assembly)

A to T at 59288804 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Cysteine to Stop codon at position 865 (C865*)

Ref Sequence

ENSEMBL: ENSMUSP00000096880 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000026084] [ENSMUST00000099274]

AlphaFold

B9EJ80

Predicted Effect

probably benign
Transcript: ENSMUST00000026084

SMART Domains

Protein: ENSMUSP00000026084
Gene: ENSMUSG00000025094

Domain	Start	End	E-Value	Type
Pfam:MFS_1	22	428	6.8e-40	PFAM
Pfam:Sugar_tr	26	284	5.9e-10	PFAM
Pfam:MFS_2	127	457	4.3e-10	PFAM

Predicted Effect

probably null
Transcript: ENSMUST00000099274
AA Change: C865*

SMART Domains

Protein: ENSMUSP00000096880
Gene: ENSMUSG00000074746
AA Change: C865*

Domain	Start	End	E-Value	Type
transmembrane domain	2	24	N/A	INTRINSIC
low complexity region	75	90	N/A	INTRINSIC
PDZ	374	448	2.02e-10	SMART
low complexity region	582	596	N/A	INTRINSIC
low complexity region	802	814	N/A	INTRINSIC
C1	834	884	8.31e-8	SMART
coiled coil region	1021	1057	N/A	INTRINSIC

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 42 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Aars2	G	T	17: 45,829,098 (GRCm39)	V755L	probably benign	Het
Abhd15	T	C	11: 77,406,791 (GRCm39)	V256A	possibly damaging	Het
Agtr1b	A	T	3: 20,370,258 (GRCm39)	V116E	possibly damaging	Het
Ahi1	A	T	10: 20,839,698 (GRCm39)	D203V	probably damaging	Het
Aplp2	G	T	9: 31,075,972 (GRCm39)		probably benign	Het
Arid4a	T	C	12: 71,144,337 (GRCm39)	S1249P	probably benign	Het
Asz1	T	A	6: 18,073,813 (GRCm39)	K298M	possibly damaging	Het
C4bp	A	G	1: 130,564,532 (GRCm39)	I384T	probably damaging	Het
Cacna1e	C	A	1: 154,341,487 (GRCm39)	A1236S	probably damaging	Het
Cdh13	T	C	8: 120,039,460 (GRCm39)	I634T	possibly damaging	Het
Cemip	A	T	7: 83,624,263 (GRCm39)	F524L	probably damaging	Het
Dnah7c	G	A	1: 46,696,271 (GRCm39)	R2051H	probably damaging	Het
Dnajc17	T	C	2: 119,016,243 (GRCm39)	K77E	probably benign	Het
Efhc2	C	T	X: 17,027,485 (GRCm39)		probably benign	Het
Ergic2	A	T	6: 148,083,441 (GRCm39)	*50K	probably null	Het
Fam83g	C	T	11: 61,598,548 (GRCm39)	P812S	probably damaging	Het
Flg2	C	T	3: 93,110,920 (GRCm39)	R983W	unknown	Het
Itih3	T	C	14: 30,635,139 (GRCm39)	T73A	probably benign	Het
Kcnj1	A	G	9: 32,307,851 (GRCm39)	S72G	probably damaging	Het
Kcnn4	T	C	7: 24,074,170 (GRCm39)	V78A	probably benign	Het
Lrp1b	T	A	2: 41,192,928 (GRCm39)	D1353V	probably damaging	Het
Lrrc2	T	A	9: 110,791,741 (GRCm39)		probably null	Het
Mplkipl1	G	T	19: 61,164,118 (GRCm39)	Q106K	possibly damaging	Het
Ndufs8	T	C	19: 3,961,232 (GRCm39)	E45G	probably benign	Het
Nell1	G	A	7: 49,870,085 (GRCm39)		probably null	Het
Nxt1	A	G	2: 148,517,692 (GRCm39)		probably benign	Het
Or2y17	A	G	11: 49,232,127 (GRCm39)	Y256C	probably benign	Het
Or5al5	T	A	2: 85,961,351 (GRCm39)	I219F	probably benign	Het
Pop1	G	T	15: 34,530,509 (GRCm39)	C969F	probably damaging	Het
Rc3h2	A	C	2: 37,304,712 (GRCm39)	I16S	probably damaging	Het
Shank1	T	C	7: 44,003,897 (GRCm39)	V1863A	possibly damaging	Het
Slc15a4	A	T	5: 127,681,729 (GRCm39)	L296Q	possibly damaging	Het
Spmip1	G	A	6: 29,471,625 (GRCm39)	G34R	probably damaging	Het
Ssr4	T	C	X: 72,830,856 (GRCm39)		probably benign	Het
Supt20	T	A	3: 54,621,144 (GRCm39)		probably benign	Het
Ttc8	A	T	12: 98,930,803 (GRCm39)	K282N	probably benign	Het
Usp40	A	T	1: 87,906,207 (GRCm39)	V676E	probably damaging	Het
Vmn1r43	T	C	6: 89,847,031 (GRCm39)	I152V	probably benign	Het
Vmn2r61	A	T	7: 41,949,361 (GRCm39)	I594F	probably benign	Het
Vps53	A	C	11: 76,008,537 (GRCm39)	I261S	probably damaging	Het
Wdr19	T	A	5: 65,370,150 (GRCm39)		probably null	Het
Zc3hav1	T	A	6: 38,309,919 (GRCm39)	D301V	probably damaging	Het

Other mutations in Pdzd8

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01293:Pdzd8	APN	19	59,288,218 (GRCm39)	missense	probably damaging	1.00
IGL01321:Pdzd8	APN	19	59,289,961 (GRCm39)	missense	probably benign
IGL01865:Pdzd8	APN	19	59,288,077 (GRCm39)	missense	possibly damaging	0.92
IGL02044:Pdzd8	APN	19	59,303,724 (GRCm39)	missense	possibly damaging	0.85
IGL02119:Pdzd8	APN	19	59,288,922 (GRCm39)	missense	possibly damaging	0.95
IGL02186:Pdzd8	APN	19	59,289,060 (GRCm39)	missense	probably damaging	1.00
IGL02389:Pdzd8	APN	19	59,289,825 (GRCm39)	missense	probably benign	0.00
IGL02479:Pdzd8	APN	19	59,288,215 (GRCm39)	nonsense	probably null
IGL02713:Pdzd8	APN	19	59,333,890 (GRCm39)	missense	probably damaging	0.98
IGL02966:Pdzd8	APN	19	59,289,291 (GRCm39)	missense	probably damaging	1.00
IGL03166:Pdzd8	APN	19	59,288,940 (GRCm39)	missense	probably damaging	1.00
citadel	UTSW	19	59,287,957 (GRCm39)	makesense	probably null
Eleventh_hour	UTSW	19	59,293,662 (GRCm39)	missense	probably damaging	1.00
keep	UTSW	19	59,289,783 (GRCm39)	nonsense	probably null
Stronghold	UTSW	19	59,333,784 (GRCm39)	nonsense	probably null
R0018:Pdzd8	UTSW	19	59,289,105 (GRCm39)	missense	probably damaging	1.00
R0038:Pdzd8	UTSW	19	59,288,028 (GRCm39)	missense	possibly damaging	0.54
R0196:Pdzd8	UTSW	19	59,289,563 (GRCm39)	missense	probably benign	0.00
R0233:Pdzd8	UTSW	19	59,288,811 (GRCm39)	missense	probably damaging	0.99
R0233:Pdzd8	UTSW	19	59,288,811 (GRCm39)	missense	probably damaging	0.99
R0418:Pdzd8	UTSW	19	59,289,361 (GRCm39)	missense	probably damaging	1.00
R0736:Pdzd8	UTSW	19	59,333,365 (GRCm39)	missense	probably damaging	0.99
R1456:Pdzd8	UTSW	19	59,288,904 (GRCm39)	missense	probably benign	0.01
R1709:Pdzd8	UTSW	19	59,289,771 (GRCm39)	missense	probably benign
R1965:Pdzd8	UTSW	19	59,288,554 (GRCm39)	missense	probably benign	0.37
R2155:Pdzd8	UTSW	19	59,288,853 (GRCm39)	missense	probably damaging	1.00
R3077:Pdzd8	UTSW	19	59,293,588 (GRCm39)	critical splice donor site	probably null
R3411:Pdzd8	UTSW	19	59,333,845 (GRCm39)	missense	probably damaging	1.00
R4345:Pdzd8	UTSW	19	59,288,560 (GRCm39)	missense	probably benign	0.00
R4354:Pdzd8	UTSW	19	59,333,913 (GRCm39)	missense	probably benign
R4504:Pdzd8	UTSW	19	59,333,880 (GRCm39)	missense	probably damaging	1.00
R4642:Pdzd8	UTSW	19	59,293,662 (GRCm39)	missense	probably damaging	1.00
R4705:Pdzd8	UTSW	19	59,333,743 (GRCm39)	missense	possibly damaging	0.80
R4773:Pdzd8	UTSW	19	59,289,292 (GRCm39)	missense	probably damaging	1.00
R4876:Pdzd8	UTSW	19	59,289,236 (GRCm39)	nonsense	probably null
R5176:Pdzd8	UTSW	19	59,333,389 (GRCm39)	missense	probably damaging	1.00
R5267:Pdzd8	UTSW	19	59,289,458 (GRCm39)	missense	probably damaging	1.00
R5707:Pdzd8	UTSW	19	59,288,057 (GRCm39)	missense	probably benign	0.00
R5766:Pdzd8	UTSW	19	59,288,972 (GRCm39)	missense	possibly damaging	0.65
R5903:Pdzd8	UTSW	19	59,333,718 (GRCm39)	missense	possibly damaging	0.58
R6036:Pdzd8	UTSW	19	59,293,641 (GRCm39)	missense	probably damaging	1.00
R6036:Pdzd8	UTSW	19	59,293,641 (GRCm39)	missense	probably damaging	1.00
R6238:Pdzd8	UTSW	19	59,288,994 (GRCm39)	missense	probably benign	0.05
R6360:Pdzd8	UTSW	19	59,289,415 (GRCm39)	missense	probably benign	0.10
R6509:Pdzd8	UTSW	19	59,333,298 (GRCm39)	missense	probably benign	0.01
R6674:Pdzd8	UTSW	19	59,289,801 (GRCm39)	missense	probably damaging	1.00
R6808:Pdzd8	UTSW	19	59,287,957 (GRCm39)	makesense	probably null
R6902:Pdzd8	UTSW	19	59,289,829 (GRCm39)	missense	possibly damaging	0.91
R7017:Pdzd8	UTSW	19	59,333,784 (GRCm39)	nonsense	probably null
R7088:Pdzd8	UTSW	19	59,333,389 (GRCm39)	missense	probably damaging	1.00
R7116:Pdzd8	UTSW	19	59,288,125 (GRCm39)	missense	probably damaging	1.00
R7158:Pdzd8	UTSW	19	59,288,589 (GRCm39)	missense	probably damaging	1.00
R7237:Pdzd8	UTSW	19	59,333,571 (GRCm39)	missense	probably damaging	1.00
R7251:Pdzd8	UTSW	19	59,289,077 (GRCm39)	missense	possibly damaging	0.96
R7314:Pdzd8	UTSW	19	59,289,783 (GRCm39)	nonsense	probably null
R7699:Pdzd8	UTSW	19	59,333,373 (GRCm39)	missense	probably damaging	1.00
R7751:Pdzd8	UTSW	19	59,333,208 (GRCm39)	missense	probably damaging	0.98
R7759:Pdzd8	UTSW	19	59,288,358 (GRCm39)	missense	probably damaging	1.00
R7784:Pdzd8	UTSW	19	59,316,295 (GRCm39)	missense	probably damaging	1.00
R7917:Pdzd8	UTSW	19	59,333,518 (GRCm39)	missense	probably damaging	0.96
R9364:Pdzd8	UTSW	19	59,333,574 (GRCm39)	missense	probably damaging	1.00
R9368:Pdzd8	UTSW	19	59,289,219 (GRCm39)	nonsense	probably null
R9406:Pdzd8	UTSW	19	59,333,245 (GRCm39)	missense
R9548:Pdzd8	UTSW	19	59,289,826 (GRCm39)	missense	probably benign	0.13
R9554:Pdzd8	UTSW	19	59,333,574 (GRCm39)	missense	probably damaging	1.00
R9688:Pdzd8	UTSW	19	59,333,683 (GRCm39)	missense	probably benign	0.05
R9750:Pdzd8	UTSW	19	59,289,684 (GRCm39)	missense	probably benign	0.00

Posted On

2015-12-18