Incidental Mutation 'IGL02971:Prmt9'
ID 365829
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Prmt9
Ensembl Gene ENSMUSG00000037134
Gene Name protein arginine methyltransferase 9
Synonyms Prmt10
Accession Numbers
Essential gene? Probably non essential (E-score: 0.231) question?
Stock # IGL02971
Quality Score
Status
Chromosome 8
Chromosomal Location 78276026-78307967 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to C at 78291698 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Methionine to Leucine at position 357 (M357L)
Ref Sequence ENSEMBL: ENSMUSP00000050181 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000056237] [ENSMUST00000118622] [ENSMUST00000210040]
AlphaFold Q3U3W5
Predicted Effect probably benign
Transcript: ENSMUST00000056237
AA Change: M357L

PolyPhen 2 Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)
SMART Domains Protein: ENSMUSP00000050181
Gene: ENSMUSG00000037134
AA Change: M357L

DomainStartEndE-ValueType
low complexity region 5 21 N/A INTRINSIC
Pfam:TPR_11 67 132 1.2e-7 PFAM
Pfam:TPR_2 102 134 7.9e-5 PFAM
Pfam:PrmA 168 257 2.5e-10 PFAM
internal_repeat_1 585 836 1.37e-10 PROSPERO
Predicted Effect probably benign
Transcript: ENSMUST00000118622
AA Change: M357L

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
SMART Domains Protein: ENSMUSP00000112692
Gene: ENSMUSG00000037134
AA Change: M357L

DomainStartEndE-ValueType
low complexity region 5 21 N/A INTRINSIC
Pfam:TPR_2 102 134 3e-5 PFAM
Pfam:PrmA 168 257 4.9e-10 PFAM
internal_repeat_1 585 836 1.05e-10 PROSPERO
Predicted Effect noncoding transcript
Transcript: ENSMUST00000142824
Predicted Effect noncoding transcript
Transcript: ENSMUST00000156753
Predicted Effect noncoding transcript
Transcript: ENSMUST00000157125
Predicted Effect probably benign
Transcript: ENSMUST00000210040
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 45 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
A930018P22Rik C T 2: 103,953,564 (GRCm39) T130I probably benign Het
Ahi1 T C 10: 20,876,450 (GRCm39) L787P possibly damaging Het
Atf3 A G 1: 190,909,640 (GRCm39) S10P probably benign Het
Cdr2l A G 11: 115,281,726 (GRCm39) N77S probably damaging Het
Cnp A G 11: 100,467,525 (GRCm39) D156G probably benign Het
Cntn3 A T 6: 102,145,894 (GRCm39) D982E probably damaging Het
Col22a1 A G 15: 71,878,587 (GRCm39) L190S probably damaging Het
Csmd3 C T 15: 47,777,325 (GRCm39) probably benign Het
Dnah5 A G 15: 28,384,607 (GRCm39) D3117G probably damaging Het
Dock5 T C 14: 67,994,558 (GRCm39) E1834G probably null Het
Eea1 A G 10: 95,877,389 (GRCm39) T1368A probably benign Het
Fam83f T C 15: 80,556,350 (GRCm39) V78A probably benign Het
Fcgbp G A 7: 27,800,898 (GRCm39) V1315I probably damaging Het
Fsd2 A T 7: 81,198,671 (GRCm39) Y364* probably null Het
Gm21976 G A 13: 98,439,057 (GRCm39) G16R probably null Het
Guca2b A G 4: 119,514,885 (GRCm39) S59P probably damaging Het
Hars2 A G 18: 36,919,231 (GRCm39) E123G probably damaging Het
Hdac2 A T 10: 36,876,370 (GRCm39) K462* probably null Het
Huwe1 T A X: 150,710,622 (GRCm39) probably benign Het
Iqgap3 T A 3: 87,997,611 (GRCm39) N262K probably benign Het
Kat6b A G 14: 21,719,826 (GRCm39) S1502G probably damaging Het
Mapkapk3 A T 9: 107,134,279 (GRCm39) D328E probably benign Het
Naca C T 10: 127,877,437 (GRCm39) probably benign Het
Npffr1 T C 10: 61,449,918 (GRCm39) V64A probably damaging Het
Oga A G 19: 45,750,682 (GRCm39) F671S probably damaging Het
Or2t49 A G 11: 58,393,211 (GRCm39) L57P probably damaging Het
Or8b3b T A 9: 38,584,564 (GRCm39) M72L probably damaging Het
Pcca A G 14: 123,126,945 (GRCm39) D718G probably damaging Het
Pde6a A C 18: 61,397,326 (GRCm39) D670A probably damaging Het
Pramel7 T A 2: 87,320,417 (GRCm39) E292V probably benign Het
Ptgfr A T 3: 151,540,963 (GRCm39) S182T probably benign Het
Rtraf A T 14: 19,866,260 (GRCm39) M152K possibly damaging Het
Satb1 T C 17: 52,049,717 (GRCm39) D579G possibly damaging Het
Serpinb6a A G 13: 34,115,453 (GRCm39) probably null Het
Slc5a9 T C 4: 111,747,497 (GRCm39) I297V possibly damaging Het
Slf1 T A 13: 77,195,223 (GRCm39) probably benign Het
St8sia2 C T 7: 73,616,559 (GRCm39) V139M probably damaging Het
Tas2r114 T C 6: 131,666,243 (GRCm39) M262V probably benign Het
Tmem147 A G 7: 30,428,847 (GRCm39) probably benign Het
Tmem220 A G 11: 66,924,933 (GRCm39) probably null Het
Uspl1 A G 5: 149,125,156 (GRCm39) N35S possibly damaging Het
Vmn1r170 A T 7: 23,305,759 (GRCm39) I54F possibly damaging Het
Vmn2r121 T G X: 123,037,591 (GRCm39) I810L probably damaging Het
Wbp2nl A T 15: 82,189,945 (GRCm39) T46S possibly damaging Het
Zfp955b T A 17: 33,519,940 (GRCm39) M57K probably benign Het
Other mutations in Prmt9
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01801:Prmt9 APN 8 78,289,069 (GRCm39) missense probably damaging 1.00
IGL02306:Prmt9 APN 8 78,287,447 (GRCm39) missense probably benign 0.06
1mM(1):Prmt9 UTSW 8 78,282,393 (GRCm39) missense probably benign 0.01
R0004:Prmt9 UTSW 8 78,282,411 (GRCm39) missense possibly damaging 0.81
R0928:Prmt9 UTSW 8 78,307,805 (GRCm39) missense probably damaging 1.00
R1328:Prmt9 UTSW 8 78,299,283 (GRCm39) missense possibly damaging 0.86
R1777:Prmt9 UTSW 8 78,291,737 (GRCm39) missense probably benign 0.05
R1826:Prmt9 UTSW 8 78,282,303 (GRCm39) nonsense probably null
R1925:Prmt9 UTSW 8 78,303,968 (GRCm39) missense possibly damaging 0.52
R3855:Prmt9 UTSW 8 78,294,894 (GRCm39) missense probably benign 0.22
R3856:Prmt9 UTSW 8 78,294,894 (GRCm39) missense probably benign 0.22
R4089:Prmt9 UTSW 8 78,299,174 (GRCm39) missense probably benign 0.00
R4963:Prmt9 UTSW 8 78,282,358 (GRCm39) missense probably damaging 1.00
R5196:Prmt9 UTSW 8 78,291,626 (GRCm39) missense probably benign 0.30
R5413:Prmt9 UTSW 8 78,298,638 (GRCm39) missense possibly damaging 0.95
R5975:Prmt9 UTSW 8 78,287,647 (GRCm39) intron probably benign
R6271:Prmt9 UTSW 8 78,304,092 (GRCm39) missense probably damaging 0.96
R7023:Prmt9 UTSW 8 78,276,086 (GRCm39) start gained probably benign
R7107:Prmt9 UTSW 8 78,294,880 (GRCm39) missense possibly damaging 0.62
R7159:Prmt9 UTSW 8 78,282,393 (GRCm39) missense probably benign 0.01
R7209:Prmt9 UTSW 8 78,291,627 (GRCm39) missense probably benign 0.32
R7770:Prmt9 UTSW 8 78,285,814 (GRCm39) splice site probably null
R7819:Prmt9 UTSW 8 78,294,973 (GRCm39) missense probably benign 0.11
R7959:Prmt9 UTSW 8 78,287,594 (GRCm39) missense probably damaging 1.00
R9106:Prmt9 UTSW 8 78,276,358 (GRCm39) missense probably benign 0.05
R9301:Prmt9 UTSW 8 78,282,374 (GRCm39) nonsense probably null
R9368:Prmt9 UTSW 8 78,285,663 (GRCm39) missense probably benign 0.00
R9665:Prmt9 UTSW 8 78,307,267 (GRCm39) missense probably benign 0.18
X0027:Prmt9 UTSW 8 78,287,512 (GRCm39) missense possibly damaging 0.68
Posted On 2015-12-18