Incidental Mutation 'R4781:Or1x6'
ID 366525
Institutional Source Beutler Lab
Gene Symbol Or1x6
Ensembl Gene ENSMUSG00000057890
Gene Name olfactory receptor family 1 subfamily X member 6
Synonyms MOR126-2, Olfr1375, Olfr1375-ps1, GA_x6K02T2QP88-4389999-4389056
MMRRC Submission 042415-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.062) question?
Stock # R4781 (G1)
Quality Score 225
Status Validated
Chromosome 11
Chromosomal Location 50938936-50939877 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to T at 50939307 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Arginine to Serine at position 124 (R124S)
Ref Sequence ENSEMBL: ENSMUSP00000144756 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000073543]
AlphaFold A0A0N4SUP0
Predicted Effect probably damaging
Transcript: ENSMUST00000073543
AA Change: R124S

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000073233
Gene: ENSMUSG00000057890
AA Change: R124S

DomainStartEndE-ValueType
Pfam:7tm_4 33 309 6.4e-60 PFAM
Pfam:7TM_GPCR_Srsx 37 306 3.9e-6 PFAM
Pfam:7tm_1 43 291 9.5e-26 PFAM
Predicted Effect probably damaging
Transcript: ENSMUST00000073543
AA Change: R124S

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000144756
Gene: ENSMUSG00000057890
AA Change: R124S

DomainStartEndE-ValueType
Pfam:7tm_4 33 309 6.4e-60 PFAM
Pfam:7TM_GPCR_Srsx 37 306 3.9e-6 PFAM
Pfam:7tm_1 43 291 9.5e-26 PFAM
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.6%
  • 10x: 97.2%
  • 20x: 95.0%
Validation Efficiency 100% (74/74)
MGI Phenotype FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
Allele List at MGI
Other mutations in this stock
Total: 66 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
2310022A10Rik T A 7: 27,271,076 (GRCm39) I157N probably damaging Het
Adgrl3 T C 5: 81,908,571 (GRCm39) Y1165H probably damaging Het
Adra2a A G 19: 54,034,926 (GRCm39) D94G probably damaging Het
Akr1c20 T A 13: 4,558,174 (GRCm39) K197* probably null Het
Ankrd65 C T 4: 155,877,493 (GRCm39) H335Y possibly damaging Het
Axin2 T A 11: 108,834,682 (GRCm39) L636Q probably damaging Het
Camk1g G T 1: 193,038,652 (GRCm39) T90N probably benign Het
Cd177 C A 7: 24,450,051 (GRCm39) C528F probably damaging Het
Cntnap5a A T 1: 116,339,931 (GRCm39) D730V possibly damaging Het
Crtap T C 9: 114,215,304 (GRCm39) D195G probably benign Het
Csn1s2b A G 5: 87,966,952 (GRCm39) S74G possibly damaging Het
Cyp3a16 T C 5: 145,392,922 (GRCm39) R128G possibly damaging Het
Dnah7a A G 1: 53,464,367 (GRCm39) F3675L probably benign Het
Dram2 T A 3: 106,478,992 (GRCm39) W195R probably damaging Het
E130308A19Rik C T 4: 59,691,057 (GRCm39) P297L probably benign Het
Eif3i T C 4: 129,489,066 (GRCm39) S83G probably benign Het
Gabra1 G A 11: 42,024,488 (GRCm39) P396S probably damaging Het
Gipr T A 7: 18,891,300 (GRCm39) Y459F possibly damaging Het
Gm11677 C T 11: 111,615,537 (GRCm39) noncoding transcript Het
Gm6981 T C 9: 51,914,056 (GRCm39) noncoding transcript Het
Grin2d T C 7: 45,511,905 (GRCm39) D180G probably damaging Het
Hectd4 T G 5: 121,444,170 (GRCm39) probably null Het
Hhat T C 1: 192,369,287 (GRCm39) probably benign Het
Hoxa6 A G 6: 52,183,400 (GRCm39) L215P possibly damaging Het
Hsf4 G A 8: 106,001,384 (GRCm39) probably null Het
Igf1r G A 7: 67,814,947 (GRCm39) A283T possibly damaging Het
Ighv15-2 A G 12: 114,528,476 (GRCm39) S25P probably damaging Het
Inpp5a C T 7: 139,057,921 (GRCm39) T43I probably benign Het
Kmt2c T A 5: 25,648,823 (GRCm39) E82V probably damaging Het
Lrrc31 A G 3: 30,741,526 (GRCm39) probably benign Het
Mdga2 A G 12: 66,844,396 (GRCm39) probably null Het
Mefv G A 16: 3,533,198 (GRCm39) P358S probably benign Het
Mrgpra9 A G 7: 46,884,795 (GRCm39) F291L possibly damaging Het
Mtmr3 A G 11: 4,438,435 (GRCm39) L673P probably benign Het
Muc19 T C 15: 91,787,360 (GRCm39) noncoding transcript Het
Myo5b A T 18: 74,877,752 (GRCm39) T1584S possibly damaging Het
Or4z4 T C 19: 12,076,731 (GRCm39) T91A probably benign Het
Palld G T 8: 62,330,062 (GRCm39) R272S probably benign Het
Pcnx3 T A 19: 5,737,158 (GRCm39) N144Y probably damaging Het
Prf1 A G 10: 61,136,203 (GRCm39) K160E probably damaging Het
Rasgrp1 G A 2: 117,122,190 (GRCm39) A400V probably benign Het
Rnf150 A G 8: 83,590,781 (GRCm39) Y48C probably damaging Het
Rpl11 G T 4: 135,777,599 (GRCm39) Q170K probably benign Het
Scin G A 12: 40,131,763 (GRCm39) A257V possibly damaging Het
Scn7a C A 2: 66,534,104 (GRCm39) A524S possibly damaging Het
Sim1 T C 10: 50,859,881 (GRCm39) L581S probably benign Het
Skor1 T C 9: 63,051,741 (GRCm39) T715A probably benign Het
Slc22a26 A G 19: 7,767,500 (GRCm39) V301A probably benign Het
Sorcs1 T C 19: 50,171,119 (GRCm39) Y923C probably damaging Het
Src T A 2: 157,309,405 (GRCm39) M304K possibly damaging Het
Srgap3 A T 6: 112,734,386 (GRCm39) probably benign Het
Stard3 G A 11: 98,263,160 (GRCm39) E72K possibly damaging Het
Svep1 T A 4: 58,070,340 (GRCm39) N2482I probably damaging Het
Tbc1d23 T C 16: 57,038,778 (GRCm39) K20R possibly damaging Het
Tcstv4 A C 13: 120,769,698 (GRCm39) K6T possibly damaging Het
Tfip11 G A 5: 112,481,265 (GRCm39) E414K probably damaging Het
Tinag G T 9: 76,904,232 (GRCm39) T397K possibly damaging Het
Traf7 C G 17: 24,729,412 (GRCm39) probably benign Het
Trmt10b T A 4: 45,305,817 (GRCm39) I164N probably damaging Het
Trpm1 A G 7: 63,884,800 (GRCm39) D827G probably benign Het
Ube2u A T 4: 100,343,855 (GRCm39) T85S probably benign Het
Ulk4 T C 9: 120,932,642 (GRCm39) D1066G probably benign Het
Vmn2r72 T A 7: 85,387,069 (GRCm39) I832F probably benign Het
Yipf1 A C 4: 107,193,355 (GRCm39) E80D probably benign Het
Zfp40 T A 17: 23,394,629 (GRCm39) R653W probably damaging Het
Zxdc A G 6: 90,349,535 (GRCm39) T308A probably damaging Het
Other mutations in Or1x6
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00092:Or1x6 APN 11 50,939,227 (GRCm39) missense probably benign 0.00
R0268:Or1x6 UTSW 11 50,939,768 (GRCm39) missense probably damaging 1.00
R0462:Or1x6 UTSW 11 50,939,336 (GRCm39) missense probably damaging 1.00
R0478:Or1x6 UTSW 11 50,939,539 (GRCm39) missense probably benign 0.03
R0839:Or1x6 UTSW 11 50,939,254 (GRCm39) missense probably benign 0.06
R2517:Or1x6 UTSW 11 50,939,300 (GRCm39) missense probably damaging 1.00
R4688:Or1x6 UTSW 11 50,939,815 (GRCm39) missense probably damaging 1.00
R5396:Or1x6 UTSW 11 50,939,297 (GRCm39) missense probably damaging 1.00
R6163:Or1x6 UTSW 11 50,939,595 (GRCm39) nonsense probably null
R6739:Or1x6 UTSW 11 50,939,564 (GRCm39) missense probably damaging 0.97
R7344:Or1x6 UTSW 11 50,939,122 (GRCm39) missense probably damaging 1.00
R7994:Or1x6 UTSW 11 50,938,967 (GRCm39) missense probably benign 0.31
R8054:Or1x6 UTSW 11 50,939,090 (GRCm39) missense probably benign 0.22
R8129:Or1x6 UTSW 11 50,939,210 (GRCm39) missense probably benign 0.00
R8940:Or1x6 UTSW 11 50,939,455 (GRCm39) missense probably benign 0.01
R9005:Or1x6 UTSW 11 50,938,938 (GRCm39) start codon destroyed probably null 0.18
R9008:Or1x6 UTSW 11 50,938,938 (GRCm39) start codon destroyed probably null 0.18
R9016:Or1x6 UTSW 11 50,938,938 (GRCm39) start codon destroyed probably null 0.18
R9018:Or1x6 UTSW 11 50,938,938 (GRCm39) start codon destroyed probably null 0.18
R9028:Or1x6 UTSW 11 50,939,660 (GRCm39) missense probably damaging 1.00
R9051:Or1x6 UTSW 11 50,938,938 (GRCm39) start codon destroyed probably null 0.18
R9052:Or1x6 UTSW 11 50,938,938 (GRCm39) start codon destroyed probably null 0.18
R9203:Or1x6 UTSW 11 50,939,161 (GRCm39) missense possibly damaging 0.82
R9364:Or1x6 UTSW 11 50,939,223 (GRCm39) nonsense probably null
R9376:Or1x6 UTSW 11 50,939,662 (GRCm39) missense probably damaging 1.00
R9554:Or1x6 UTSW 11 50,939,223 (GRCm39) nonsense probably null
R9641:Or1x6 UTSW 11 50,939,207 (GRCm39) missense probably benign 0.34
Z1176:Or1x6 UTSW 11 50,939,662 (GRCm39) missense probably damaging 1.00
Z1177:Or1x6 UTSW 11 50,939,353 (GRCm39) missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- TGGGAACACACTCATCTTCCTG -3'
(R):5'- AGGCCAACTTCATGAGCAGG -3'

Sequencing Primer
(F):5'- GGCCATCATCTCCGACCC -3'
(R):5'- TTCATGAGCAGGTAAGCATCAC -3'
Posted On 2015-12-29