Mutagenetix > Incidental Mutation

Incidental Mutation 'R4776:4930522L14Rik'

367917

Institutional Source

Beutler Lab

Gene Symbol

4930522L14Rik

Ensembl Gene

ENSMUSG00000072762

Gene Name

RIKEN cDNA 4930522L14 gene

Synonyms

MMRRC Submission

042413-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.124) question?

Stock #

R4776 (G1)

Quality Score

197

Status

Validated

Chromosome

Chromosomal Location

109735990-109751886 bp(-) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 109736873 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Isoleucine to Threonine at position 373 (I373T)

Ref Sequence

ENSEMBL: ENSMUSP00000108166 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000100937] [ENSMUST00000112547]

AlphaFold

E9QAG4

Predicted Effect

probably benign
Transcript: ENSMUST00000100937

SMART Domains

Protein: ENSMUSP00000098497
Gene: ENSMUSG00000072762

Domain	Start	End	E-Value	Type
KRAB	4	64	5.37e-15	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000112547
AA Change: I373T

PolyPhen 2 Score 0.221 (Sensitivity: 0.91; Specificity: 0.88)

SMART Domains

Protein: ENSMUSP00000108166
Gene: ENSMUSG00000072762
AA Change: I373T

Domain	Start	End	E-Value	Type
KRAB	4	66	7.19e-16	SMART
ZnF_C2H2	103	125	2.75e-3	SMART
ZnF_C2H2	131	153	1.72e-4	SMART
ZnF_C2H2	159	181	7.9e-4	SMART
ZnF_C2H2	187	209	1.04e-3	SMART
ZnF_C2H2	215	237	1.1e-2	SMART
ZnF_C2H2	243	265	3.89e-3	SMART
ZnF_C2H2	271	294	3.69e-4	SMART
ZnF_C2H2	300	322	5.9e-3	SMART
ZnF_C2H2	328	350	1.56e-2	SMART
ZnF_C2H2	356	378	1.18e-2	SMART
ZnF_C2H2	384	406	9.08e-4	SMART
ZnF_C2H2	412	434	1.98e-4	SMART
ZnF_C2H2	440	462	2.61e-4	SMART
ZnF_C2H2	468	491	1.38e-3	SMART
ZnF_C2H2	497	519	3.39e-3	SMART
ZnF_C2H2	525	547	1.4e-4	SMART
ZnF_C2H2	553	576	1.95e-3	SMART
ZnF_C2H2	582	604	5.14e-3	SMART
ZnF_C2H2	610	632	1.67e-2	SMART
ZnF_C2H2	638	660	1.72e-4	SMART

Meta Mutation Damage Score

0.0898

Coding Region Coverage

1x: 99.1%
3x: 98.5%
10x: 96.8%
20x: 93.9%

Validation Efficiency

98% (94/96)

Allele List at MGI

Other mutations in this stock

Total: 90 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
2310035C23Rik	T	A	1: 105,719,535	Y683*	probably null	Het
2610028H24Rik	A	T	10: 76,457,512	M156L	probably benign	Het
4930470P17Rik	C	T	2: 170,579,724	A79T	unknown	Het
A830010M20Rik	C	A	5: 107,510,451	A1117E	probably damaging	Het
Amotl1	G	A	9: 14,593,373	Q217*	probably null	Het
Ankrd28	A	T	14: 31,732,054	C254S	probably damaging	Het
Ap2a1	A	G	7: 44,901,546		probably benign	Het
Arfgef3	A	T	10: 18,654,247	S245T	probably benign	Het
Arntl	A	T	7: 113,285,037	K94I	probably damaging	Het
Atp1b2	A	T	11: 69,601,561	D224E	probably damaging	Het
Boc	G	A	16: 44,487,721	R924W	probably damaging	Het
Car14	C	T	3: 95,898,873	G292D	probably benign	Het
Cenpb	T	C	2: 131,178,183		probably benign	Het
Ces1b	A	T	8: 93,063,030	D423E	possibly damaging	Het
Cfap54	T	A	10: 92,972,694	N1373I	possibly damaging	Het
Chrdl2	T	C	7: 100,006,541		probably benign	Het
Cic	T	G	7: 25,282,883	S12A	possibly damaging	Het
Csmd2	A	T	4: 128,442,892	Q1421L	probably benign	Het
D630039A03Rik	T	C	4: 57,910,452	H120R	possibly damaging	Het
Dicer1	T	A	12: 104,692,446	D1779V	probably damaging	Het
Dock9	G	T	14: 121,610,097	H1016N	possibly damaging	Het
Dxo	T	C	17: 34,838,998	L352P	probably damaging	Het
Eif2b5	T	A	16: 20,500,233	F78I	probably damaging	Het
Eri2	A	G	7: 119,784,946		probably benign	Het
Fam208b	A	G	13: 3,570,391	F2170S	probably damaging	Het
Fbxw7	T	G	3: 84,925,689	L13V	possibly damaging	Het
Fgf7	T	A	2: 126,035,783	C23*	probably null	Het
Fubp1	T	A	3: 152,222,068		probably null	Het
Gm2663	A	T	6: 40,995,953	I240N	probably damaging	Het
Gnb1l	C	T	16: 18,548,096	Q140*	probably null	Het
Gnptab	G	A	10: 88,436,528	R1010Q	probably damaging	Het
Gtf2h1	G	A	7: 46,822,878	W544*	probably null	Het
Gucy2c	C	T	6: 136,722,514	E586K	probably damaging	Het
Hc	T	A	2: 35,039,734	E232V	probably benign	Het
Ifi207	T	A	1: 173,730,056	D372V	unknown	Het
Igkv8-28	A	T	6: 70,144,118	V15E	probably benign	Het
Il1rap	A	G	16: 26,692,799	S198G	possibly damaging	Het
Lct	A	G	1: 128,300,387	I1123T	probably damaging	Het
Lhcgr	T	C	17: 88,742,697	E467G	probably damaging	Het
Macf1	C	T	4: 123,476,015	R86K	probably benign	Het
Maml3	T	A	3: 51,856,532	Q337L	probably benign	Het
March10	T	A	11: 105,390,037	D474V	probably benign	Het
March2	G	T	17: 33,709,916	T2K	probably damaging	Het
Mast1	A	G	8: 84,937,193		probably null	Het
Med12l	T	C	3: 59,233,212	I868T	probably damaging	Het
Msrb1	T	C	17: 24,740,173	S100P	probably damaging	Het
Nlrp4c	T	C	7: 6,066,126	L342P	probably benign	Het
Nrxn3	T	A	12: 90,331,956	V417E	possibly damaging	Het
Ntng1	T	A	3: 109,934,713	D248V	probably damaging	Het
Oaz3	T	C	3: 94,434,998	Q117R	probably benign	Het
Olfr1311	A	G	2: 112,020,931	Y308H	probably benign	Het
Olfr444	A	G	6: 42,955,521	I8V	probably benign	Het
Olfr589	A	G	7: 103,155,414	L111P	probably benign	Het
Osbpl3	A	C	6: 50,300,973	S767A	probably benign	Het
Pafah1b1	A	T	11: 74,685,871		probably benign	Het
Pard6b	A	G	2: 168,098,788	T232A	probably damaging	Het
Paxip1	A	T	5: 27,765,206	C596S	probably damaging	Het
Pnpla6	T	C	8: 3,523,818	V422A	probably benign	Het
Psmd6	A	T	14: 14,120,932		probably benign	Het
Rock2	T	A	12: 16,977,740	C1353S	probably damaging	Het
Rpl31-ps17	C	T	12: 54,701,612		noncoding transcript	Het
Sel1l	T	A	12: 91,813,893	H658L	probably damaging	Het
Sh3yl1	T	A	12: 30,940,314	L105Q	probably damaging	Het
Shroom3	G	T	5: 92,943,086	V1151F	probably damaging	Het
Sirt1	T	C	10: 63,335,722	K227E	probably benign	Het
Slc25a34	A	T	4: 141,623,588	F37I	possibly damaging	Het
Slc39a5	T	A	10: 128,397,049	I378F	probably damaging	Het
Smarcad1	A	T	6: 65,098,824	D731V	probably null	Het
Sox6	T	G	7: 115,541,670	K483N	probably damaging	Het
Sp140	T	A	1: 85,610,828	D95E	possibly damaging	Het
Srgap1	G	T	10: 121,792,351	D882E	probably benign	Het
Syne4	T	C	7: 30,316,833		probably benign	Het
Tec	T	C	5: 72,768,776	Y289C	probably benign	Het
Tmem102	A	T	11: 69,804,802	Y115N	probably damaging	Het
Tns2	C	T	15: 102,108,934	R281C	probably damaging	Het
Trav17	T	A	14: 53,806,640	M1K	probably null	Het
Trdn	T	A	10: 33,399,082		probably null	Het
Trp53	A	T	11: 69,586,921	I8F	probably benign	Het
Ttn	T	A	2: 76,754,662	D22064V	probably damaging	Het
Ube3c	G	A	5: 29,632,838		probably null	Het
Ulk1	C	T	5: 110,788,947		probably null	Het
Upp1	T	C	11: 9,135,976	V271A	probably damaging	Het
Vmn2r4	T	C	3: 64,388,661	E901G	probably damaging	Het
Vmn2r96	G	A	17: 18,597,508	G449D	probably damaging	Het
Vps37b	T	C	5: 124,006,612	K165E	probably damaging	Het
Vwf	A	T	6: 125,566,305	I185F	possibly damaging	Het
Wasf2	A	G	4: 133,185,004	T56A	probably benign	Het
Zdhhc23	C	G	16: 43,973,589	D241H	possibly damaging	Het
Zfp276	T	C	8: 123,254,884	S57P	probably benign	Het
Zxdc	A	G	6: 90,370,518	H287R	probably damaging	Het

Other mutations in 4930522L14Rik

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL02622:4930522L14Rik	APN	5	109739235	missense	possibly damaging	0.86
R0164:4930522L14Rik	UTSW	5	109736847	missense	probably damaging	0.96
R0164:4930522L14Rik	UTSW	5	109736847	missense	probably damaging	0.96
R0432:4930522L14Rik	UTSW	5	109736919	missense	probably damaging	1.00
R0463:4930522L14Rik	UTSW	5	109737060	unclassified	probably benign
R0891:4930522L14Rik	UTSW	5	109736290	missense	possibly damaging	0.47
R1289:4930522L14Rik	UTSW	5	109736890	nonsense	probably null
R1637:4930522L14Rik	UTSW	5	109738992	missense	probably benign	0.01
R1764:4930522L14Rik	UTSW	5	109736789	missense	probably benign	0.22
R1793:4930522L14Rik	UTSW	5	109736278	missense	probably damaging	1.00
R1860:4930522L14Rik	UTSW	5	109736232	missense	probably damaging	1.00
R1899:4930522L14Rik	UTSW	5	109736798	missense	probably benign	0.04
R2135:4930522L14Rik	UTSW	5	109737643	missense	probably benign	0.00
R2143:4930522L14Rik	UTSW	5	109736750	missense	probably damaging	1.00
R2877:4930522L14Rik	UTSW	5	109738945	splice site	probably benign
R3847:4930522L14Rik	UTSW	5	109736324	splice site	probably null
R4431:4930522L14Rik	UTSW	5	109736574	missense	possibly damaging	0.47
R4578:4930522L14Rik	UTSW	5	109736671	nonsense	probably null
R4611:4930522L14Rik	UTSW	5	109737393	missense	probably benign	0.00
R4921:4930522L14Rik	UTSW	5	109737796	missense	probably benign	0.25
R4937:4930522L14Rik	UTSW	5	109736201	missense	probably benign	0.12
R4952:4930522L14Rik	UTSW	5	109739197	critical splice donor site	probably null
R4980:4930522L14Rik	UTSW	5	109737426	missense	probably damaging	1.00
R5079:4930522L14Rik	UTSW	5	109737330	missense	probably benign
R5088:4930522L14Rik	UTSW	5	109736073	missense	probably damaging	1.00
R5143:4930522L14Rik	UTSW	5	109739198	critical splice donor site	probably null
R5183:4930522L14Rik	UTSW	5	109739305	missense	probably damaging	1.00
R5461:4930522L14Rik	UTSW	5	109736777	missense	possibly damaging	0.74
R5498:4930522L14Rik	UTSW	5	109737547	missense	probably benign	0.05
R5576:4930522L14Rik	UTSW	5	109737704	missense	probably benign	0.00
R6081:4930522L14Rik	UTSW	5	109739231	missense	probably damaging	1.00
R6387:4930522L14Rik	UTSW	5	109737015	missense	possibly damaging	0.88
R6509:4930522L14Rik	UTSW	5	109737384	nonsense	probably null
R6585:4930522L14Rik	UTSW	5	109737668	missense	probably damaging	1.00
R7309:4930522L14Rik	UTSW	5	109736953	missense	probably damaging	1.00
R7740:4930522L14Rik	UTSW	5	109737504	nonsense	probably null
R7877:4930522L14Rik	UTSW	5	109736364	missense	probably damaging	1.00
R8526:4930522L14Rik	UTSW	5	109737789	missense	possibly damaging	0.92
R8884:4930522L14Rik	UTSW	5	109737488	missense	probably damaging	0.98
R9047:4930522L14Rik	UTSW	5	109737554	missense
R9432:4930522L14Rik	UTSW	5	109737051	missense	unknown

Predicted Primers

PCR Primer
(F):5'- CTTTGCCACACTGATCACACTTGT -3'
(R):5'- GTGGTAAAGGCTTTGCATATCATG -3'

Sequencing Primer
(F):5'- CACACTGATCACACTTGTAAGGTGTC -3'
(R):5'- CTTTGCATATCATGGAAGGTTCGAAG -3'

Posted On

2015-12-29