Incidental Mutation 'R4840:Chd1'
ID |
371779 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Chd1
|
Ensembl Gene |
ENSMUSG00000023852 |
Gene Name |
chromodomain helicase DNA binding protein 1 |
Synonyms |
4930525N21Rik |
MMRRC Submission |
042453-MU
|
Accession Numbers |
|
Essential gene? |
Non essential
(E-score: 0.000)
|
Stock # |
R4840 (G1)
|
Quality Score |
225 |
Status
|
Validated
|
Chromosome |
17 |
Chromosomal Location |
15925229-15992872 bp(+) (GRCm39) |
Type of Mutation |
nonsense |
DNA Base Change (assembly) |
G to A
at 15989015 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Tryptophan to Stop codon
at position 1589
(W1589*)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000024627
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000024627]
|
AlphaFold |
P40201 |
Predicted Effect |
probably null
Transcript: ENSMUST00000024627
AA Change: W1589*
|
SMART Domains |
Protein: ENSMUSP00000024627 Gene: ENSMUSG00000023852 AA Change: W1589*
Domain | Start | End | E-Value | Type |
low complexity region
|
17 |
67 |
N/A |
INTRINSIC |
low complexity region
|
105 |
115 |
N/A |
INTRINSIC |
low complexity region
|
116 |
136 |
N/A |
INTRINSIC |
low complexity region
|
151 |
175 |
N/A |
INTRINSIC |
low complexity region
|
213 |
230 |
N/A |
INTRINSIC |
CHROMO
|
268 |
355 |
6.43e-20 |
SMART |
CHROMO
|
385 |
443 |
1.19e-14 |
SMART |
DEXDc
|
475 |
672 |
3.44e-34 |
SMART |
Blast:DEXDc
|
692 |
786 |
2e-54 |
BLAST |
low complexity region
|
787 |
799 |
N/A |
INTRINSIC |
HELICc
|
816 |
900 |
8.48e-25 |
SMART |
Blast:DEXDc
|
955 |
1234 |
1e-112 |
BLAST |
PDB:4B4C|A
|
1119 |
1320 |
1e-132 |
PDB |
low complexity region
|
1325 |
1348 |
N/A |
INTRINSIC |
low complexity region
|
1377 |
1388 |
N/A |
INTRINSIC |
DUF4208
|
1396 |
1500 |
5.54e-51 |
SMART |
low complexity region
|
1507 |
1516 |
N/A |
INTRINSIC |
low complexity region
|
1538 |
1549 |
N/A |
INTRINSIC |
low complexity region
|
1626 |
1650 |
N/A |
INTRINSIC |
|
Meta Mutation Damage Score |
0.9755 |
Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.5%
- 10x: 96.9%
- 20x: 94.1%
|
Validation Efficiency |
97% (114/117) |
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The CHD family of proteins is characterized by the presence of chromo (chromatin organization modifier) domains and SNF2-related helicase/ATPase domains. CHD genes alter gene expression possibly by modification of chromatin structure thus altering access of the transcriptional apparatus to its chromosomal DNA template. [provided by RefSeq, Jul 2008] PHENOTYPE: Mice homozygous for a knock-out allele exhibit complete embryonic lethality associated with arrest of epiblast development due to increased apoptosis and cell cycle defects, abnormal rostral-caudal axis patterning, and failure to gastrulate. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 102 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
2810459M11Rik |
C |
A |
1: 85,974,166 (GRCm39) |
T161K |
probably benign |
Het |
Actn3 |
G |
A |
19: 4,914,539 (GRCm39) |
R530W |
probably damaging |
Het |
Alg11 |
C |
T |
8: 22,558,026 (GRCm39) |
A404V |
possibly damaging |
Het |
Alkbh8 |
T |
A |
9: 3,369,751 (GRCm39) |
V340D |
probably damaging |
Het |
Arhgef12 |
T |
C |
9: 42,886,364 (GRCm39) |
H1166R |
probably benign |
Het |
Aspm |
T |
A |
1: 139,398,269 (GRCm39) |
D978E |
possibly damaging |
Het |
Bod1l |
C |
T |
5: 41,975,815 (GRCm39) |
G1833D |
probably damaging |
Het |
Brd3 |
A |
G |
2: 27,339,251 (GRCm39) |
V676A |
possibly damaging |
Het |
Brip1 |
G |
A |
11: 86,037,009 (GRCm39) |
T454I |
possibly damaging |
Het |
C3ar1 |
T |
C |
6: 122,827,723 (GRCm39) |
I165V |
probably benign |
Het |
Camta1 |
T |
A |
4: 151,228,864 (GRCm39) |
Q656L |
probably benign |
Het |
Casp14 |
A |
T |
10: 78,549,178 (GRCm39) |
L256* |
probably null |
Het |
Cdh23 |
G |
T |
10: 60,255,556 (GRCm39) |
H773Q |
possibly damaging |
Het |
Cldn19 |
A |
G |
4: 119,112,951 (GRCm39) |
Q61R |
probably damaging |
Het |
Cyp2a22 |
A |
G |
7: 26,631,949 (GRCm39) |
S436P |
probably benign |
Het |
Emc10 |
A |
C |
7: 44,142,051 (GRCm39) |
V124G |
probably damaging |
Het |
Enam |
A |
T |
5: 88,650,885 (GRCm39) |
D723V |
probably benign |
Het |
Eps8 |
C |
A |
6: 137,504,128 (GRCm39) |
Q158H |
probably damaging |
Het |
Ercc6 |
G |
A |
14: 32,263,253 (GRCm39) |
D486N |
probably damaging |
Het |
Fasn |
T |
C |
11: 120,703,885 (GRCm39) |
E1485G |
possibly damaging |
Het |
Fat2 |
T |
C |
11: 55,169,844 (GRCm39) |
K2972E |
probably benign |
Het |
Fbxw28 |
T |
C |
9: 109,168,602 (GRCm39) |
K30R |
probably null |
Het |
Flot2 |
T |
A |
11: 77,948,339 (GRCm39) |
L164Q |
probably damaging |
Het |
Fsip2 |
A |
T |
2: 82,779,739 (GRCm39) |
I162L |
probably benign |
Het |
Fsip2 |
A |
T |
2: 82,815,815 (GRCm39) |
L3849F |
probably benign |
Het |
Gabrb1 |
C |
G |
5: 71,858,154 (GRCm39) |
P60R |
probably damaging |
Het |
Galnt14 |
T |
C |
17: 73,811,893 (GRCm39) |
R443G |
probably benign |
Het |
Gas8 |
C |
T |
8: 124,257,753 (GRCm39) |
T400M |
probably benign |
Het |
Gfap |
T |
C |
11: 102,785,214 (GRCm39) |
Y254C |
probably damaging |
Het |
Git2 |
A |
G |
5: 114,883,543 (GRCm39) |
S396P |
probably damaging |
Het |
Glb1l3 |
A |
T |
9: 26,740,349 (GRCm39) |
M327K |
probably benign |
Het |
Gm10715 |
A |
C |
9: 3,038,062 (GRCm39) |
|
probably benign |
Het |
Gm10787 |
G |
A |
10: 76,857,841 (GRCm39) |
|
noncoding transcript |
Het |
Gm1123 |
T |
A |
9: 98,900,622 (GRCm39) |
D78V |
probably damaging |
Het |
Gm27013 |
T |
C |
6: 130,655,079 (GRCm39) |
T128A |
probably benign |
Het |
Gpbp1 |
A |
G |
13: 111,577,164 (GRCm39) |
|
probably null |
Het |
Gphn |
G |
A |
12: 78,569,729 (GRCm39) |
|
probably null |
Het |
Gpr157 |
A |
G |
4: 150,186,823 (GRCm39) |
E317G |
probably benign |
Het |
Gsdmc4 |
T |
A |
15: 63,765,596 (GRCm39) |
M318L |
probably benign |
Het |
Gtf2f2 |
A |
T |
14: 76,248,131 (GRCm39) |
W19R |
probably damaging |
Het |
Gvin-ps3 |
T |
C |
7: 105,680,627 (GRCm39) |
|
noncoding transcript |
Het |
Helb |
A |
G |
10: 119,920,763 (GRCm39) |
V1060A |
probably benign |
Het |
Igfn1 |
C |
T |
1: 135,895,778 (GRCm39) |
G1596D |
probably benign |
Het |
Il1rl2 |
T |
C |
1: 40,366,547 (GRCm39) |
I27T |
possibly damaging |
Het |
Inpp5j |
A |
G |
11: 3,449,676 (GRCm39) |
V702A |
probably damaging |
Het |
Kmt2d |
A |
C |
15: 98,759,775 (GRCm39) |
V1161G |
unknown |
Het |
Krtap1-3 |
T |
G |
11: 99,481,715 (GRCm39) |
Y144S |
possibly damaging |
Het |
Layn |
C |
T |
9: 50,968,682 (GRCm39) |
V354M |
probably damaging |
Het |
Lrba |
G |
A |
3: 86,526,816 (GRCm39) |
|
probably null |
Het |
Lrp8 |
T |
A |
4: 107,727,234 (GRCm39) |
L893Q |
possibly damaging |
Het |
Mrps9 |
T |
A |
1: 42,937,575 (GRCm39) |
|
probably benign |
Het |
Mug1 |
T |
A |
6: 121,862,813 (GRCm39) |
M1387K |
probably damaging |
Het |
Myo18b |
A |
C |
5: 113,021,895 (GRCm39) |
V499G |
probably benign |
Het |
Nbea |
T |
C |
3: 55,618,091 (GRCm39) |
E2321G |
probably benign |
Het |
Nrsn2 |
C |
T |
2: 152,211,552 (GRCm39) |
V160I |
probably benign |
Het |
Nup210 |
G |
A |
6: 91,008,650 (GRCm39) |
Q510* |
probably null |
Het |
Ofcc1 |
G |
A |
13: 40,168,864 (GRCm39) |
T841I |
probably damaging |
Het |
Or2ag12 |
T |
G |
7: 106,277,330 (GRCm39) |
D121A |
probably damaging |
Het |
P3h3 |
G |
T |
6: 124,827,600 (GRCm39) |
Q479K |
possibly damaging |
Het |
Paqr9 |
T |
A |
9: 95,442,723 (GRCm39) |
F238I |
probably damaging |
Het |
Parp3 |
A |
T |
9: 106,350,308 (GRCm39) |
L343H |
probably damaging |
Het |
Pcdh18 |
A |
C |
3: 49,699,117 (GRCm39) |
M1115R |
probably damaging |
Het |
Pcdh8 |
A |
G |
14: 80,008,308 (GRCm39) |
V85A |
possibly damaging |
Het |
Pcdhb4 |
A |
G |
18: 37,441,452 (GRCm39) |
N254S |
possibly damaging |
Het |
Pld1 |
T |
C |
3: 28,130,700 (GRCm39) |
V500A |
probably benign |
Het |
Pramel29 |
T |
C |
4: 143,935,144 (GRCm39) |
K199R |
probably damaging |
Het |
Prkg2 |
A |
T |
5: 99,129,002 (GRCm39) |
D311E |
probably benign |
Het |
Prss42 |
T |
C |
9: 110,628,369 (GRCm39) |
L171P |
probably damaging |
Het |
Pth2 |
T |
A |
7: 44,830,767 (GRCm39) |
L17H |
probably damaging |
Het |
Reln |
A |
T |
5: 22,223,844 (GRCm39) |
|
probably null |
Het |
Rmi2 |
G |
T |
16: 10,657,701 (GRCm39) |
V104L |
probably damaging |
Het |
Rpusd4 |
T |
A |
9: 35,179,831 (GRCm39) |
V108D |
probably damaging |
Het |
Rufy4 |
C |
A |
1: 74,168,198 (GRCm39) |
T82K |
possibly damaging |
Het |
Scimp |
G |
A |
11: 70,682,294 (GRCm39) |
Q141* |
probably null |
Het |
Sel1l2 |
T |
C |
2: 140,105,390 (GRCm39) |
T267A |
probably benign |
Het |
Sema5a |
T |
A |
15: 32,550,400 (GRCm39) |
S146R |
possibly damaging |
Het |
Sh2d3c |
T |
C |
2: 32,611,172 (GRCm39) |
M1T |
probably null |
Het |
Slc30a6 |
T |
C |
17: 74,712,716 (GRCm39) |
L71P |
probably damaging |
Het |
Srrm3 |
A |
G |
5: 135,883,449 (GRCm39) |
Y224C |
possibly damaging |
Het |
Tacr3 |
A |
T |
3: 134,560,615 (GRCm39) |
T185S |
possibly damaging |
Het |
Tas2r140 |
T |
A |
6: 133,032,528 (GRCm39) |
T77S |
probably benign |
Het |
Thsd7b |
T |
C |
1: 129,523,581 (GRCm39) |
V128A |
probably benign |
Het |
Tnfrsf10b |
T |
G |
14: 70,013,608 (GRCm39) |
H179Q |
probably damaging |
Het |
Tonsl |
A |
G |
15: 76,517,409 (GRCm39) |
V770A |
probably benign |
Het |
Trim42 |
G |
A |
9: 97,244,982 (GRCm39) |
P606L |
probably benign |
Het |
Trim45 |
A |
T |
3: 100,832,804 (GRCm39) |
T346S |
possibly damaging |
Het |
Ttc28 |
C |
A |
5: 111,433,947 (GRCm39) |
S2296Y |
probably damaging |
Het |
Ttc41 |
C |
T |
10: 86,566,989 (GRCm39) |
R552C |
probably benign |
Het |
Tube1 |
A |
G |
10: 39,020,842 (GRCm39) |
N243D |
probably benign |
Het |
Tvp23b |
G |
T |
11: 62,770,424 (GRCm39) |
|
probably null |
Het |
Ubxn11 |
T |
A |
4: 133,836,919 (GRCm39) |
I49N |
probably damaging |
Het |
Usp17le |
T |
A |
7: 104,418,977 (GRCm39) |
E55V |
probably benign |
Het |
Vmn2r114 |
A |
T |
17: 23,510,353 (GRCm39) |
V709D |
probably damaging |
Het |
Vmn2r129 |
G |
C |
4: 156,685,733 (GRCm39) |
|
noncoding transcript |
Het |
Vmn2r23 |
C |
T |
6: 123,690,033 (GRCm39) |
T303M |
probably damaging |
Het |
Vmn2r60 |
C |
T |
7: 41,785,285 (GRCm39) |
P166S |
probably damaging |
Het |
Vmn2r83 |
A |
G |
10: 79,313,682 (GRCm39) |
I97V |
possibly damaging |
Het |
Wbp2nl |
A |
T |
15: 82,198,537 (GRCm39) |
K358M |
possibly damaging |
Het |
Xpo1 |
T |
A |
11: 23,228,183 (GRCm39) |
I150N |
probably damaging |
Het |
Zfp113 |
G |
A |
5: 138,143,687 (GRCm39) |
L188F |
probably damaging |
Het |
Zfp189 |
T |
G |
4: 49,529,984 (GRCm39) |
S362R |
probably damaging |
Het |
Zfp593os |
A |
G |
4: 133,972,587 (GRCm39) |
|
probably benign |
Het |
|
Other mutations in Chd1 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00704:Chd1
|
APN |
17 |
15,952,827 (GRCm39) |
missense |
probably benign |
0.37 |
IGL01356:Chd1
|
APN |
17 |
15,970,127 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01369:Chd1
|
APN |
17 |
15,975,259 (GRCm39) |
missense |
probably damaging |
0.97 |
IGL01519:Chd1
|
APN |
17 |
17,598,831 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01604:Chd1
|
APN |
17 |
15,990,359 (GRCm39) |
missense |
possibly damaging |
0.95 |
IGL01635:Chd1
|
APN |
17 |
17,598,858 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01721:Chd1
|
APN |
17 |
15,990,430 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01959:Chd1
|
APN |
17 |
15,962,435 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02367:Chd1
|
APN |
17 |
17,610,315 (GRCm39) |
missense |
probably damaging |
0.98 |
IGL02476:Chd1
|
APN |
17 |
15,954,535 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02756:Chd1
|
APN |
17 |
15,951,069 (GRCm39) |
missense |
probably damaging |
0.97 |
IGL02817:Chd1
|
APN |
17 |
15,969,762 (GRCm39) |
missense |
possibly damaging |
0.92 |
IGL03084:Chd1
|
APN |
17 |
15,990,560 (GRCm39) |
missense |
probably benign |
0.22 |
IGL03108:Chd1
|
APN |
17 |
15,945,543 (GRCm39) |
missense |
possibly damaging |
0.70 |
Holly
|
UTSW |
17 |
15,946,545 (GRCm39) |
missense |
possibly damaging |
0.72 |
R0053:Chd1
|
UTSW |
17 |
15,967,451 (GRCm39) |
missense |
probably damaging |
1.00 |
R0053:Chd1
|
UTSW |
17 |
15,967,451 (GRCm39) |
missense |
probably damaging |
1.00 |
R0128:Chd1
|
UTSW |
17 |
17,613,829 (GRCm39) |
missense |
probably damaging |
1.00 |
R0197:Chd1
|
UTSW |
17 |
15,945,693 (GRCm39) |
missense |
probably benign |
|
R0285:Chd1
|
UTSW |
17 |
17,594,942 (GRCm39) |
splice site |
probably benign |
|
R0326:Chd1
|
UTSW |
17 |
15,988,830 (GRCm39) |
missense |
probably benign |
|
R0326:Chd1
|
UTSW |
17 |
15,988,828 (GRCm39) |
missense |
probably damaging |
1.00 |
R0372:Chd1
|
UTSW |
17 |
17,607,552 (GRCm39) |
missense |
probably benign |
0.14 |
R0391:Chd1
|
UTSW |
17 |
15,970,156 (GRCm39) |
missense |
probably damaging |
1.00 |
R0486:Chd1
|
UTSW |
17 |
15,954,604 (GRCm39) |
missense |
probably damaging |
0.99 |
R0637:Chd1
|
UTSW |
17 |
15,962,550 (GRCm39) |
missense |
possibly damaging |
0.50 |
R0675:Chd1
|
UTSW |
17 |
15,978,523 (GRCm39) |
unclassified |
probably benign |
|
R0701:Chd1
|
UTSW |
17 |
15,945,693 (GRCm39) |
missense |
probably benign |
|
R0788:Chd1
|
UTSW |
17 |
15,927,376 (GRCm39) |
missense |
possibly damaging |
0.86 |
R0848:Chd1
|
UTSW |
17 |
15,990,503 (GRCm39) |
missense |
probably damaging |
1.00 |
R0883:Chd1
|
UTSW |
17 |
15,945,693 (GRCm39) |
missense |
probably benign |
|
R1169:Chd1
|
UTSW |
17 |
15,955,994 (GRCm39) |
missense |
probably damaging |
1.00 |
R1218:Chd1
|
UTSW |
17 |
15,945,574 (GRCm39) |
missense |
probably damaging |
1.00 |
R1370:Chd1
|
UTSW |
17 |
17,607,742 (GRCm39) |
missense |
probably benign |
0.00 |
R1470:Chd1
|
UTSW |
17 |
15,946,545 (GRCm39) |
missense |
possibly damaging |
0.72 |
R1470:Chd1
|
UTSW |
17 |
15,946,545 (GRCm39) |
missense |
possibly damaging |
0.72 |
R1478:Chd1
|
UTSW |
17 |
15,959,769 (GRCm39) |
missense |
probably damaging |
0.99 |
R1752:Chd1
|
UTSW |
17 |
15,963,494 (GRCm39) |
critical splice donor site |
probably null |
|
R1759:Chd1
|
UTSW |
17 |
17,607,533 (GRCm39) |
missense |
probably benign |
0.00 |
R1767:Chd1
|
UTSW |
17 |
15,990,565 (GRCm39) |
missense |
probably damaging |
1.00 |
R1938:Chd1
|
UTSW |
17 |
15,982,748 (GRCm39) |
missense |
probably benign |
0.39 |
R2007:Chd1
|
UTSW |
17 |
15,951,268 (GRCm39) |
missense |
probably damaging |
1.00 |
R2069:Chd1
|
UTSW |
17 |
15,962,556 (GRCm39) |
missense |
probably damaging |
1.00 |
R3771:Chd1
|
UTSW |
17 |
17,594,913 (GRCm39) |
missense |
probably damaging |
1.00 |
R3773:Chd1
|
UTSW |
17 |
17,594,913 (GRCm39) |
missense |
probably damaging |
1.00 |
R3849:Chd1
|
UTSW |
17 |
15,952,133 (GRCm39) |
missense |
probably damaging |
1.00 |
R4241:Chd1
|
UTSW |
17 |
15,990,289 (GRCm39) |
nonsense |
probably null |
|
R4242:Chd1
|
UTSW |
17 |
15,990,289 (GRCm39) |
nonsense |
probably null |
|
R4354:Chd1
|
UTSW |
17 |
17,610,263 (GRCm39) |
missense |
probably benign |
0.23 |
R4468:Chd1
|
UTSW |
17 |
15,980,657 (GRCm39) |
missense |
probably damaging |
0.99 |
R4469:Chd1
|
UTSW |
17 |
15,980,657 (GRCm39) |
missense |
probably damaging |
0.99 |
R4731:Chd1
|
UTSW |
17 |
17,598,079 (GRCm39) |
missense |
probably benign |
0.36 |
R4824:Chd1
|
UTSW |
17 |
15,953,386 (GRCm39) |
missense |
probably damaging |
1.00 |
R4840:Chd1
|
UTSW |
17 |
15,989,016 (GRCm39) |
missense |
probably damaging |
1.00 |
R4880:Chd1
|
UTSW |
17 |
17,594,916 (GRCm39) |
missense |
probably damaging |
1.00 |
R4960:Chd1
|
UTSW |
17 |
15,962,493 (GRCm39) |
missense |
probably damaging |
0.96 |
R5071:Chd1
|
UTSW |
17 |
15,982,667 (GRCm39) |
missense |
probably benign |
|
R5078:Chd1
|
UTSW |
17 |
15,946,616 (GRCm39) |
missense |
possibly damaging |
0.93 |
R5114:Chd1
|
UTSW |
17 |
15,948,460 (GRCm39) |
missense |
probably benign |
0.25 |
R5268:Chd1
|
UTSW |
17 |
15,956,005 (GRCm39) |
missense |
probably damaging |
1.00 |
R5304:Chd1
|
UTSW |
17 |
15,990,530 (GRCm39) |
missense |
possibly damaging |
0.55 |
R5304:Chd1
|
UTSW |
17 |
15,975,213 (GRCm39) |
missense |
probably benign |
0.01 |
R5307:Chd1
|
UTSW |
17 |
15,952,832 (GRCm39) |
missense |
probably damaging |
1.00 |
R5458:Chd1
|
UTSW |
17 |
15,958,811 (GRCm39) |
missense |
probably damaging |
1.00 |
R5553:Chd1
|
UTSW |
17 |
17,605,875 (GRCm39) |
missense |
probably benign |
0.17 |
R5623:Chd1
|
UTSW |
17 |
15,975,194 (GRCm39) |
missense |
probably damaging |
1.00 |
R6022:Chd1
|
UTSW |
17 |
17,598,035 (GRCm39) |
missense |
probably benign |
0.39 |
R6137:Chd1
|
UTSW |
17 |
15,978,950 (GRCm39) |
missense |
probably damaging |
1.00 |
R6257:Chd1
|
UTSW |
17 |
15,950,465 (GRCm39) |
splice site |
probably null |
|
R6373:Chd1
|
UTSW |
17 |
15,958,898 (GRCm39) |
missense |
probably damaging |
1.00 |
R6458:Chd1
|
UTSW |
17 |
15,950,864 (GRCm39) |
missense |
probably benign |
0.01 |
R6476:Chd1
|
UTSW |
17 |
17,601,250 (GRCm39) |
critical splice donor site |
probably null |
|
R6508:Chd1
|
UTSW |
17 |
15,958,895 (GRCm39) |
missense |
probably benign |
0.31 |
R6553:Chd1
|
UTSW |
17 |
15,945,692 (GRCm39) |
missense |
probably benign |
0.00 |
R6745:Chd1
|
UTSW |
17 |
17,607,429 (GRCm39) |
missense |
probably benign |
0.08 |
R7107:Chd1
|
UTSW |
17 |
15,981,628 (GRCm39) |
missense |
probably damaging |
0.98 |
R7230:Chd1
|
UTSW |
17 |
15,927,199 (GRCm39) |
splice site |
probably null |
|
R7317:Chd1
|
UTSW |
17 |
15,962,536 (GRCm39) |
missense |
possibly damaging |
0.71 |
R7341:Chd1
|
UTSW |
17 |
15,990,499 (GRCm39) |
missense |
probably damaging |
0.99 |
R7421:Chd1
|
UTSW |
17 |
15,969,660 (GRCm39) |
missense |
probably benign |
0.03 |
R7704:Chd1
|
UTSW |
17 |
15,987,737 (GRCm39) |
missense |
probably benign |
|
R7763:Chd1
|
UTSW |
17 |
15,953,303 (GRCm39) |
missense |
probably damaging |
1.00 |
R8156:Chd1
|
UTSW |
17 |
15,981,666 (GRCm39) |
missense |
probably benign |
|
R8194:Chd1
|
UTSW |
17 |
17,594,737 (GRCm39) |
start gained |
probably benign |
|
R8261:Chd1
|
UTSW |
17 |
17,607,804 (GRCm39) |
missense |
probably benign |
0.02 |
R8338:Chd1
|
UTSW |
17 |
15,990,242 (GRCm39) |
missense |
probably damaging |
1.00 |
R8401:Chd1
|
UTSW |
17 |
15,963,473 (GRCm39) |
missense |
probably damaging |
1.00 |
R8411:Chd1
|
UTSW |
17 |
15,982,711 (GRCm39) |
missense |
probably damaging |
0.98 |
R9067:Chd1
|
UTSW |
17 |
15,951,107 (GRCm39) |
missense |
possibly damaging |
0.49 |
R9184:Chd1
|
UTSW |
17 |
15,962,551 (GRCm39) |
missense |
possibly damaging |
0.71 |
R9210:Chd1
|
UTSW |
17 |
15,950,767 (GRCm39) |
missense |
possibly damaging |
0.70 |
R9212:Chd1
|
UTSW |
17 |
15,950,767 (GRCm39) |
missense |
possibly damaging |
0.70 |
R9666:Chd1
|
UTSW |
17 |
15,955,976 (GRCm39) |
missense |
probably damaging |
1.00 |
R9673:Chd1
|
UTSW |
17 |
15,989,023 (GRCm39) |
missense |
probably benign |
0.24 |
Z1176:Chd1
|
UTSW |
17 |
15,988,995 (GRCm39) |
missense |
probably damaging |
1.00 |
Z1176:Chd1
|
UTSW |
17 |
15,986,609 (GRCm39) |
missense |
probably damaging |
0.98 |
Z1177:Chd1
|
UTSW |
17 |
15,968,063 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Predicted Primers |
PCR Primer
(F):5'- TTGGGCAGGAGTTACTGTTATTA -3'
(R):5'- TTCCACCAACAAGCTGCACT -3'
Sequencing Primer
(F):5'- AGTAGCAGGGACAGCTAT -3'
(R):5'- CCAACAAGCTGCACTATTTAAAATG -3'
|
Posted On |
2016-03-01 |