Mutagenetix > Incidental Mutation

Incidental Mutation 'R4845:Zfp879'

372118

Institutional Source

Beutler Lab

Gene Symbol

Zfp879

Ensembl Gene

ENSMUSG00000044296

Gene Name

zinc finger protein 879

Synonyms

9630041N07Rik

MMRRC Submission

042458-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R4845 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

50722858-50732379 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 50724672 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Glutamic Acid to Glycine at position 128 (E128G)

Ref Sequence

ENSEMBL: ENSMUSP00000104762 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000049625] [ENSMUST00000109133] [ENSMUST00000109134]

AlphaFold

Q8BI99

Predicted Effect

probably damaging
Transcript: ENSMUST00000049625
AA Change: E128G

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)

SMART Domains

Protein: ENSMUSP00000061782
Gene: ENSMUSG00000044296
AA Change: E128G

Domain	Start	End	E-Value	Type
KRAB	14	74	1.54e-33	SMART
ZnF_C2H2	204	226	1.92e-2	SMART
ZnF_C2H2	232	254	1.38e-3	SMART
ZnF_C2H2	260	282	1.16e-1	SMART
ZnF_C2H2	288	310	4.54e-4	SMART
ZnF_C2H2	316	338	8.34e-3	SMART
ZnF_C2H2	344	366	4.87e-4	SMART
ZnF_C2H2	372	394	8.47e-4	SMART
ZnF_C2H2	400	422	1.84e-4	SMART
ZnF_C2H2	428	450	2.57e-3	SMART
ZnF_C2H2	456	478	1.47e-3	SMART
ZnF_C2H2	484	506	3.21e-4	SMART
ZnF_C2H2	512	534	1.5e-4	SMART
ZnF_C2H2	540	562	5.21e-4	SMART

Predicted Effect

probably damaging
Transcript: ENSMUST00000109133
AA Change: E55G

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)

SMART Domains

Protein: ENSMUSP00000104761
Gene: ENSMUSG00000044296
AA Change: E55G

Domain	Start	End	E-Value	Type
ZnF_C2H2	131	153	1.92e-2	SMART
ZnF_C2H2	159	181	1.38e-3	SMART
ZnF_C2H2	187	209	1.16e-1	SMART
ZnF_C2H2	215	237	4.54e-4	SMART
ZnF_C2H2	243	265	8.34e-3	SMART
ZnF_C2H2	271	293	4.87e-4	SMART
ZnF_C2H2	299	321	8.47e-4	SMART
ZnF_C2H2	327	349	1.84e-4	SMART
ZnF_C2H2	355	377	2.57e-3	SMART
ZnF_C2H2	383	405	1.47e-3	SMART
ZnF_C2H2	411	433	3.21e-4	SMART
ZnF_C2H2	439	461	1.5e-4	SMART
ZnF_C2H2	467	489	5.21e-4	SMART

Predicted Effect

probably damaging
Transcript: ENSMUST00000109134
AA Change: E128G

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)

SMART Domains

Protein: ENSMUSP00000104762
Gene: ENSMUSG00000044296
AA Change: E128G

Domain	Start	End	E-Value	Type
KRAB	14	74	1.54e-33	SMART
ZnF_C2H2	204	226	1.92e-2	SMART
ZnF_C2H2	232	254	1.38e-3	SMART
ZnF_C2H2	260	282	1.16e-1	SMART
ZnF_C2H2	288	310	4.54e-4	SMART
ZnF_C2H2	316	338	8.34e-3	SMART
ZnF_C2H2	344	366	4.87e-4	SMART
ZnF_C2H2	372	394	8.47e-4	SMART
ZnF_C2H2	400	422	1.84e-4	SMART
ZnF_C2H2	428	450	2.57e-3	SMART
ZnF_C2H2	456	478	1.47e-3	SMART
ZnF_C2H2	484	506	3.21e-4	SMART
ZnF_C2H2	512	534	1.5e-4	SMART
ZnF_C2H2	540	562	5.21e-4	SMART

Coding Region Coverage

1x: 99.1%
3x: 98.4%
10x: 96.7%
20x: 93.6%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 57 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abcg1	C	T	17: 31,333,057 (GRCm39)	S600F	possibly damaging	Het
Arhgap21	T	A	2: 20,885,998 (GRCm39)	N393I	probably damaging	Het
Atp5pf	T	A	16: 84,628,365 (GRCm39)	I6F	possibly damaging	Het
B4galt6	A	G	18: 20,821,517 (GRCm39)	L337S	probably benign	Het
C8b	G	T	4: 104,649,009 (GRCm39)	V308F	possibly damaging	Het
Cables1	A	G	18: 12,077,545 (GRCm39)	R558G	probably damaging	Het
Chmp2b	T	A	16: 65,347,862 (GRCm39)	Q38L	probably damaging	Het
Clca3b	A	T	3: 144,531,031 (GRCm39)	I773K	probably benign	Het
Cnmd	T	C	14: 79,899,448 (GRCm39)	T2A	probably benign	Het
Crb1	C	T	1: 139,170,772 (GRCm39)	D812N	probably benign	Het
Dnah7c	T	A	1: 46,832,692 (GRCm39)	D3901E	probably damaging	Het
Dst	T	C	1: 34,232,208 (GRCm39)	V3445A	probably benign	Het
Epn1	T	A	7: 5,096,908 (GRCm39)	I230N	possibly damaging	Het
Exoc6b	G	T	6: 84,812,119 (GRCm39)	D627E	probably benign	Het
Exosc1	T	C	19: 41,919,797 (GRCm39)	K74E	possibly damaging	Het
Extl3	T	C	14: 65,315,024 (GRCm39)	T53A	probably benign	Het
Fam227a	C	T	15: 79,533,912 (GRCm39)	R17H	probably damaging	Het
Faxc	G	T	4: 21,993,358 (GRCm39)	W334L	probably damaging	Het
Gabrr3	T	C	16: 59,246,833 (GRCm39)	I94T	probably damaging	Het
Ifi203	A	T	1: 173,754,595 (GRCm39)	M298K	probably benign	Het
Igkv4-78	A	T	6: 69,037,207 (GRCm39)	M1K	probably null	Het
Iqcm	G	T	8: 76,472,980 (GRCm39)	R273I	probably damaging	Het
Itga1	G	T	13: 115,110,708 (GRCm39)	S961*	probably null	Het
Jmy	T	A	13: 93,576,246 (GRCm39)	M886L	possibly damaging	Het
Lrp2	T	C	2: 69,339,585 (GRCm39)	T1109A	possibly damaging	Het
Mastl	A	G	2: 23,030,010 (GRCm39)	S239P	probably benign	Het
Mettl14	T	A	3: 123,165,004 (GRCm39)	E112V	probably damaging	Het
Mfng	C	T	15: 78,648,588 (GRCm39)	R163H	probably benign	Het
Musk	A	G	4: 58,296,679 (GRCm39)	D93G	probably damaging	Het
Myoc	C	T	1: 162,475,034 (GRCm39)	T195M	possibly damaging	Het
Ncapg2	A	G	12: 116,404,208 (GRCm39)	D893G	probably damaging	Het
Nrap	C	T	19: 56,339,902 (GRCm39)	V908M	probably benign	Het
Or4a79	T	C	2: 89,552,120 (GRCm39)	I112V	probably benign	Het
Or52n5	T	C	7: 104,588,570 (GRCm39)	V279A	possibly damaging	Het
Or5g9	T	A	2: 85,551,836 (GRCm39)	L29*	probably null	Het
Orc4	T	C	2: 48,799,478 (GRCm39)	N333S	probably benign	Het
Otx1	C	A	11: 21,947,037 (GRCm39)	A91S	probably damaging	Het
Pcdhb8	G	A	18: 37,489,771 (GRCm39)	G483D	probably benign	Het
Pclo	A	T	5: 14,729,132 (GRCm39)		probably benign	Het
Ppm1k	A	T	6: 57,499,753 (GRCm39)	Y174*	probably null	Het
Ptprq	A	T	10: 107,489,393 (GRCm39)	S911T	probably benign	Het
Rp1	C	A	1: 4,419,451 (GRCm39)	A554S	probably benign	Het
Sema3f	T	C	9: 107,562,700 (GRCm39)	Y427C	probably damaging	Het
Slc12a1	A	T	2: 125,030,146 (GRCm39)	I573F	probably damaging	Het
Slc17a1	A	T	13: 24,060,601 (GRCm39)	Y201F	probably damaging	Het
Slc4a7	A	T	14: 14,733,803 (GRCm38)	H71L	probably damaging	Het
Spata6l	G	T	19: 28,905,148 (GRCm39)	D305E	probably benign	Het
St13	G	C	15: 81,283,786 (GRCm39)	R4G	probably benign	Het
Tab1	C	T	15: 80,036,964 (GRCm39)	R217W	probably damaging	Het
Taf6	T	A	5: 138,180,909 (GRCm39)	Y224F	possibly damaging	Het
Tmc5	C	G	7: 118,241,604 (GRCm39)	F432L	probably damaging	Het
Trbc1	A	T	6: 41,516,169 (GRCm39)		probably benign	Het
Trbv21	A	G	6: 41,179,879 (GRCm39)	N65S	probably benign	Het
Trim15	G	A	17: 37,177,875 (GRCm39)	P40L	probably benign	Het
Txnip	T	C	3: 96,466,916 (GRCm39)	S197P	probably benign	Het
Vmn1r167	T	A	7: 23,204,158 (GRCm39)	Q286L	probably benign	Het
Wnt9a	A	G	11: 59,222,067 (GRCm39)	I322V	probably benign	Het

Other mutations in Zfp879

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01659:Zfp879	APN	11	50,729,281 (GRCm39)	missense	probably damaging	1.00
IGL02175:Zfp879	APN	11	50,728,743 (GRCm39)	missense	probably benign	0.13
IGL02259:Zfp879	APN	11	50,729,255 (GRCm39)	missense	probably benign	0.00
Bazooka	UTSW	11	50,729,302 (GRCm39)	missense	probably damaging	0.98
joe	UTSW	11	50,724,222 (GRCm39)	missense	probably damaging	0.99
R0131:Zfp879	UTSW	11	50,724,426 (GRCm39)	missense	probably damaging	1.00
R1430:Zfp879	UTSW	11	50,724,784 (GRCm39)	missense	probably benign	0.00
R1576:Zfp879	UTSW	11	50,724,376 (GRCm39)	missense	probably benign	0.41
R1616:Zfp879	UTSW	11	50,723,473 (GRCm39)	missense	probably benign	0.06
R1701:Zfp879	UTSW	11	50,724,060 (GRCm39)	missense	possibly damaging	0.77
R1965:Zfp879	UTSW	11	50,724,355 (GRCm39)	missense	probably damaging	1.00
R2057:Zfp879	UTSW	11	50,723,428 (GRCm39)	missense	probably benign
R2058:Zfp879	UTSW	11	50,723,428 (GRCm39)	missense	probably benign
R2219:Zfp879	UTSW	11	50,724,094 (GRCm39)	missense	probably damaging	1.00
R3110:Zfp879	UTSW	11	50,723,989 (GRCm39)	missense	possibly damaging	0.87
R3112:Zfp879	UTSW	11	50,723,989 (GRCm39)	missense	possibly damaging	0.87
R4658:Zfp879	UTSW	11	50,724,024 (GRCm39)	missense	probably damaging	1.00
R4998:Zfp879	UTSW	11	50,728,796 (GRCm39)	missense	probably damaging	1.00
R6362:Zfp879	UTSW	11	50,729,302 (GRCm39)	missense	probably damaging	0.98
R6930:Zfp879	UTSW	11	50,723,839 (GRCm39)	missense	probably damaging	1.00
R7091:Zfp879	UTSW	11	50,724,222 (GRCm39)	missense	probably damaging	0.99
R7186:Zfp879	UTSW	11	50,724,621 (GRCm39)	missense	probably benign	0.06
R7218:Zfp879	UTSW	11	50,723,508 (GRCm39)	missense	possibly damaging	0.61
R8138:Zfp879	UTSW	11	50,724,275 (GRCm39)	nonsense	probably null
R8445:Zfp879	UTSW	11	50,724,213 (GRCm39)	missense	probably damaging	0.98
R8523:Zfp879	UTSW	11	50,728,757 (GRCm39)	missense	probably benign
R8725:Zfp879	UTSW	11	50,729,321 (GRCm39)	missense	probably damaging	0.98
R8790:Zfp879	UTSW	11	50,723,429 (GRCm39)	nonsense	probably null
R8882:Zfp879	UTSW	11	50,724,763 (GRCm39)	nonsense	probably null
R9229:Zfp879	UTSW	11	50,723,886 (GRCm39)	missense	probably damaging	1.00
X0066:Zfp879	UTSW	11	50,723,914 (GRCm39)	missense	possibly damaging	0.89
Z1177:Zfp879	UTSW	11	50,724,258 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- CGGTTGAATCCCAGTTGTTTGAA -3'
(R):5'- GCTAACCGTGTTACATGATTTTACA -3'

Sequencing Primer
(F):5'- GTTTGAACAGAACTGAGTACTGCTG -3'
(R):5'- GCTTGTTTGAGCCCATAG -3'

Posted On

2016-03-01