Incidental Mutation 'R0239:Gemin6'
ID 37238
Institutional Source Beutler Lab
Gene Symbol Gemin6
Ensembl Gene ENSMUSG00000055760
Gene Name gem nuclear organelle associated protein 6
Synonyms
MMRRC Submission 038477-MU
Accession Numbers
Essential gene? Possibly essential (E-score: 0.745) question?
Stock # R0239 (G1)
Quality Score 225
Status Not validated
Chromosome 17
Chromosomal Location 80224441-80228497 bp(+) (GRCm38)
Type of Mutation missense
DNA Base Change (assembly) C to A at 80225710 bp (GRCm38)
Zygosity Heterozygous
Amino Acid Change Alanine to Aspartic acid at position 24 (A24D)
Ref Sequence ENSEMBL: ENSMUSP00000063554 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000069486]
AlphaFold Q9CX53
Predicted Effect probably damaging
Transcript: ENSMUST00000069486
AA Change: A24D

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000063554
Gene: ENSMUSG00000055760
AA Change: A24D

DomainStartEndE-ValueType
Pfam:Gemin6 1 166 9.7e-102 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000156869
Meta Mutation Damage Score 0.7247 question?
Coding Region Coverage
  • 1x: 99.0%
  • 3x: 98.1%
  • 10x: 95.6%
  • 20x: 89.9%
Validation Efficiency 100% (3/3)
Allele List at MGI
Other mutations in this stock
Total: 69 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
1110002E22Rik TTCCTCCTCCTCCTCCTCCTCC TTCCTCCTCCTCCTCCTCC 3: 138,065,834 (GRCm38) probably benign Het
Adra1d C A 2: 131,546,214 (GRCm38) V474F probably benign Het
Alg8 A T 7: 97,383,684 (GRCm38) probably null Het
Ash1l A G 3: 89,067,222 (GRCm38) D2618G possibly damaging Het
Atp6v1c2 C A 12: 17,294,675 (GRCm38) probably null Het
Cacna1d A G 14: 30,123,496 (GRCm38) V572A probably benign Het
Camta1 A G 4: 151,143,730 (GRCm38) W882R probably damaging Het
Cd72 A G 4: 43,453,163 (GRCm38) V91A probably benign Het
Cdh12 T C 15: 21,586,407 (GRCm38) W771R probably damaging Het
Cdx2 G T 5: 147,303,287 (GRCm38) T193K probably damaging Het
Cfap70 A C 14: 20,448,605 (GRCm38) S5A probably benign Het
Chmp7 A G 14: 69,720,997 (GRCm38) V241A probably damaging Het
D3Ertd751e A G 3: 41,753,878 (GRCm38) Y150C probably damaging Het
Depdc5 T C 5: 32,943,240 (GRCm38) S832P probably damaging Het
Dnhd1 A G 7: 105,721,531 (GRCm38) S4673G probably benign Het
Dock4 G T 12: 40,737,540 (GRCm38) S818I probably damaging Het
Dysf C T 6: 84,064,479 (GRCm38) Q156* probably null Het
Elp1 C A 4: 56,784,596 (GRCm38) V466L probably benign Het
Espnl T C 1: 91,322,287 (GRCm38) V52A probably damaging Het
Flcn T C 11: 59,801,076 (GRCm38) N249S probably benign Het
Gm5773 A G 3: 93,774,032 (GRCm38) H337R probably benign Het
Hal T C 10: 93,503,482 (GRCm38) S478P possibly damaging Het
Hectd1 T A 12: 51,769,318 (GRCm38) M1324L possibly damaging Het
Hyal5 T A 6: 24,876,344 (GRCm38) L72Q probably damaging Het
Ift140 C A 17: 25,045,523 (GRCm38) C557* probably null Het
Kbtbd3 G T 9: 4,330,144 (GRCm38) V173L possibly damaging Het
Kif14 A G 1: 136,527,393 (GRCm38) E1551G probably damaging Het
Krt17 G A 11: 100,260,878 (GRCm38) R30* probably null Het
Lamb3 A T 1: 193,321,053 (GRCm38) D100V probably damaging Het
Map2 A G 1: 66,416,106 (GRCm38) D1385G probably damaging Het
Mettl25 C T 10: 105,826,525 (GRCm38) V195I probably damaging Het
Myh8 A G 11: 67,301,692 (GRCm38) T1466A probably benign Het
Myo3b T A 2: 70,105,425 (GRCm38) C61S probably benign Het
Nacc2 T G 2: 26,062,261 (GRCm38) N361T probably damaging Het
Nf1 A T 11: 79,418,574 (GRCm38) K438M possibly damaging Het
Nipal4 A G 11: 46,150,441 (GRCm38) V309A possibly damaging Het
Nomo1 T C 7: 46,079,594 (GRCm38) probably null Het
Nubp2 T C 17: 24,884,471 (GRCm38) E144G probably damaging Het
Nwd2 A T 5: 63,800,124 (GRCm38) I266F probably benign Het
Or12e7 T C 2: 87,458,037 (GRCm38) F291L probably benign Het
Or2ag1b A G 7: 106,689,255 (GRCm38) Y159H probably benign Het
Or52s1 G A 7: 103,212,726 (GRCm38) V289M possibly damaging Het
Orc1 T C 4: 108,595,646 (GRCm38) probably null Het
Otogl T A 10: 107,806,696 (GRCm38) N1291I probably damaging Het
Pah C T 10: 87,567,281 (GRCm38) P173S possibly damaging Het
Pga5 A G 19: 10,669,453 (GRCm38) Y305H probably damaging Het
Plekha4 A G 7: 45,532,358 (GRCm38) H62R probably damaging Het
Plxnd1 G T 6: 115,968,793 (GRCm38) D906E probably benign Het
Ppfia4 T C 1: 134,329,189 (GRCm38) E98G possibly damaging Het
Ptk2 A T 15: 73,343,283 (GRCm38) probably null Het
Raet1e C A 10: 22,180,862 (GRCm38) H112Q possibly damaging Het
Scai T A 2: 39,075,042 (GRCm38) I597F probably benign Het
Sirpd A G 3: 15,296,601 (GRCm38) L163P probably damaging Het
Slc35c2 C T 2: 165,280,837 (GRCm38) G176S probably damaging Het
Slc35f4 A T 14: 49,304,256 (GRCm38) I347N possibly damaging Het
Slc52a3 T C 2: 152,008,156 (GRCm38) *461Q probably null Het
Slc6a1 G A 6: 114,302,800 (GRCm38) V142I probably benign Het
Tbc1d31 C A 15: 57,940,753 (GRCm38) T388N probably benign Het
Tmem63c T C 12: 87,075,639 (GRCm38) W404R probably damaging Het
Tmem79 A G 3: 88,333,321 (GRCm38) S107P probably benign Het
Trip11 C T 12: 101,884,728 (GRCm38) E741K probably damaging Het
Trpm5 G T 7: 143,082,958 (GRCm38) T414N probably damaging Het
Tsnaxip1 T A 8: 105,844,488 (GRCm38) I660N possibly damaging Het
Ube2q2 T C 9: 55,163,007 (GRCm38) S78P probably damaging Het
Vac14 A T 8: 110,635,375 (GRCm38) probably null Het
Vps51 G T 19: 6,071,437 (GRCm38) S185* probably null Het
Zfp11 C T 5: 129,658,238 (GRCm38) G53E possibly damaging Het
Zfp532 A T 18: 65,682,985 (GRCm38) I810F possibly damaging Het
Zfp599 C T 9: 22,249,759 (GRCm38) C370Y probably damaging Het
Other mutations in Gemin6
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00953:Gemin6 APN 17 80,227,865 (GRCm38) missense possibly damaging 0.56
IGL02129:Gemin6 APN 17 80,227,926 (GRCm38) missense probably damaging 1.00
R0197:Gemin6 UTSW 17 80,228,095 (GRCm38) missense probably damaging 1.00
R0239:Gemin6 UTSW 17 80,225,710 (GRCm38) missense probably damaging 1.00
R0883:Gemin6 UTSW 17 80,228,095 (GRCm38) missense probably damaging 1.00
R1995:Gemin6 UTSW 17 80,227,985 (GRCm38) missense probably damaging 1.00
R4570:Gemin6 UTSW 17 80,228,069 (GRCm38) nonsense probably null
R4885:Gemin6 UTSW 17 80,227,898 (GRCm38) missense probably damaging 0.99
R5335:Gemin6 UTSW 17 80,225,755 (GRCm38) missense probably damaging 1.00
R5445:Gemin6 UTSW 17 80,227,749 (GRCm38) missense probably damaging 0.98
R5447:Gemin6 UTSW 17 80,227,749 (GRCm38) missense probably damaging 0.98
R5451:Gemin6 UTSW 17 80,227,749 (GRCm38) missense probably damaging 0.98
R5452:Gemin6 UTSW 17 80,227,749 (GRCm38) missense probably damaging 0.98
R5522:Gemin6 UTSW 17 80,227,749 (GRCm38) missense probably damaging 0.98
R5525:Gemin6 UTSW 17 80,227,749 (GRCm38) missense probably damaging 0.98
R5526:Gemin6 UTSW 17 80,227,749 (GRCm38) missense probably damaging 0.98
R7291:Gemin6 UTSW 17 80,227,775 (GRCm38) missense possibly damaging 0.61
R7576:Gemin6 UTSW 17 80,225,726 (GRCm38) nonsense probably null
R7845:Gemin6 UTSW 17 80,225,661 (GRCm38) missense probably benign 0.00
R8842:Gemin6 UTSW 17 80,225,686 (GRCm38) missense possibly damaging 0.88
R8862:Gemin6 UTSW 17 80,228,003 (GRCm38) missense probably damaging 1.00
R9203:Gemin6 UTSW 17 80,227,808 (GRCm38) missense probably benign 0.00
Predicted Primers PCR Primer
(F):5'- AGACGGCACACTATGTTACCAGGC -3'
(R):5'- ACAGCAGCAGTTAGGCTCAAAAGC -3'

Sequencing Primer
(F):5'- agagcactgactgctattcc -3'
(R):5'- GCAATTATTATGTGTGAATGACCAG -3'
Posted On 2013-05-09