Incidental Mutation 'R4856:Ttc3'
ID |
374001 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Ttc3
|
Ensembl Gene |
ENSMUSG00000040785 |
Gene Name |
tetratricopeptide repeat domain 3 |
Synonyms |
D16Ium21e, TPRD, 2610202A04Rik, D16Ium21 |
MMRRC Submission |
042467-MU
|
Accession Numbers |
|
Essential gene? |
Possibly essential
(E-score: 0.574)
|
Stock # |
R4856 (G1)
|
Quality Score |
225 |
Status
|
Not validated
|
Chromosome |
16 |
Chromosomal Location |
94171479-94270081 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
T to C
at 94191142 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Valine to Alanine
at position 228
(V228A)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000113311
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000117648]
[ENSMUST00000119131]
[ENSMUST00000122895]
[ENSMUST00000147352]
[ENSMUST00000145432]
[ENSMUST00000149885]
[ENSMUST00000141856]
[ENSMUST00000145883]
[ENSMUST00000150097]
[ENSMUST00000139513]
[ENSMUST00000143145]
[ENSMUST00000147046]
[ENSMUST00000150346]
[ENSMUST00000151770]
[ENSMUST00000155692]
[ENSMUST00000232660]
[ENSMUST00000232395]
[ENSMUST00000231915]
[ENSMUST00000153062]
[ENSMUST00000154243]
[ENSMUST00000153988]
[ENSMUST00000231569]
[ENSMUST00000152117]
|
AlphaFold |
no structure available at present |
Predicted Effect |
probably benign
Transcript: ENSMUST00000117648
AA Change: V228A
PolyPhen 2
Score 0.009 (Sensitivity: 0.96; Specificity: 0.77)
|
SMART Domains |
Protein: ENSMUSP00000112801 Gene: ENSMUSG00000040785 AA Change: V228A
Domain | Start | End | E-Value | Type |
TPR
|
231 |
264 |
3.61e-2 |
SMART |
TPR
|
265 |
298 |
3.32e-1 |
SMART |
Blast:TPR
|
300 |
332 |
2e-12 |
BLAST |
low complexity region
|
444 |
459 |
N/A |
INTRINSIC |
TPR
|
576 |
609 |
2.55e-2 |
SMART |
low complexity region
|
720 |
732 |
N/A |
INTRINSIC |
coiled coil region
|
765 |
796 |
N/A |
INTRINSIC |
low complexity region
|
1018 |
1032 |
N/A |
INTRINSIC |
low complexity region
|
1036 |
1050 |
N/A |
INTRINSIC |
low complexity region
|
1170 |
1190 |
N/A |
INTRINSIC |
low complexity region
|
1248 |
1260 |
N/A |
INTRINSIC |
low complexity region
|
1278 |
1291 |
N/A |
INTRINSIC |
coiled coil region
|
1472 |
1570 |
N/A |
INTRINSIC |
low complexity region
|
1876 |
1887 |
N/A |
INTRINSIC |
RING
|
1931 |
1970 |
7e-9 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000119131
AA Change: V228A
PolyPhen 2
Score 0.323 (Sensitivity: 0.90; Specificity: 0.89)
|
SMART Domains |
Protein: ENSMUSP00000113311 Gene: ENSMUSG00000040785 AA Change: V228A
Domain | Start | End | E-Value | Type |
Pfam:TPR_11
|
229 |
285 |
1.1e-12 |
PFAM |
Pfam:TPR_1
|
232 |
264 |
2.1e-4 |
PFAM |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000122895
AA Change: V210A
PolyPhen 2
Score 0.034 (Sensitivity: 0.95; Specificity: 0.82)
|
SMART Domains |
Protein: ENSMUSP00000123037 Gene: ENSMUSG00000040785 AA Change: V210A
Domain | Start | End | E-Value | Type |
TPR
|
213 |
246 |
3.61e-2 |
SMART |
TPR
|
247 |
280 |
3.32e-1 |
SMART |
Blast:TPR
|
282 |
314 |
3e-12 |
BLAST |
low complexity region
|
426 |
441 |
N/A |
INTRINSIC |
TPR
|
558 |
591 |
2.55e-2 |
SMART |
low complexity region
|
702 |
714 |
N/A |
INTRINSIC |
coiled coil region
|
747 |
778 |
N/A |
INTRINSIC |
low complexity region
|
1000 |
1014 |
N/A |
INTRINSIC |
low complexity region
|
1018 |
1032 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000127667
|
SMART Domains |
Protein: ENSMUSP00000122425 Gene: ENSMUSG00000040785
Domain | Start | End | E-Value | Type |
Pfam:TPR_11
|
22 |
89 |
4.7e-16 |
PFAM |
Pfam:TPR_2
|
24 |
57 |
5.7e-4 |
PFAM |
Pfam:TPR_1
|
25 |
57 |
3.5e-5 |
PFAM |
Pfam:TPR_9
|
35 |
103 |
3.2e-6 |
PFAM |
Pfam:TPR_1
|
58 |
89 |
2.1e-4 |
PFAM |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000127911
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000130960
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000147352
AA Change: V210A
PolyPhen 2
Score 0.034 (Sensitivity: 0.95; Specificity: 0.82)
|
SMART Domains |
Protein: ENSMUSP00000116097 Gene: ENSMUSG00000040785 AA Change: V210A
Domain | Start | End | E-Value | Type |
TPR
|
213 |
246 |
3.61e-2 |
SMART |
TPR
|
247 |
280 |
3.32e-1 |
SMART |
Blast:TPR
|
282 |
314 |
3e-12 |
BLAST |
low complexity region
|
426 |
441 |
N/A |
INTRINSIC |
TPR
|
558 |
591 |
2.55e-2 |
SMART |
low complexity region
|
702 |
714 |
N/A |
INTRINSIC |
coiled coil region
|
747 |
778 |
N/A |
INTRINSIC |
low complexity region
|
1000 |
1014 |
N/A |
INTRINSIC |
low complexity region
|
1018 |
1032 |
N/A |
INTRINSIC |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000149753
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000151192
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000145432
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000149885
|
SMART Domains |
Protein: ENSMUSP00000122006 Gene: ENSMUSG00000040785
Domain | Start | End | E-Value | Type |
Pfam:TPR_2
|
1 |
31 |
3.5e-4 |
PFAM |
Pfam:TPR_11
|
1 |
58 |
7.8e-16 |
PFAM |
Pfam:TPR_1
|
2 |
31 |
1.8e-5 |
PFAM |
Pfam:TPR_9
|
9 |
58 |
2.5e-6 |
PFAM |
Pfam:TPR_17
|
20 |
53 |
4.2e-7 |
PFAM |
Pfam:TPR_1
|
32 |
58 |
2.5e-4 |
PFAM |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000141856
|
SMART Domains |
Protein: ENSMUSP00000117369 Gene: ENSMUSG00000040785
Domain | Start | End | E-Value | Type |
Pfam:TPR_1
|
90 |
121 |
1e-6 |
PFAM |
Pfam:TPR_2
|
90 |
121 |
7.9e-6 |
PFAM |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000145883
|
SMART Domains |
Protein: ENSMUSP00000123442 Gene: ENSMUSG00000040785
Domain | Start | End | E-Value | Type |
transmembrane domain
|
42 |
64 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000150097
|
SMART Domains |
Protein: ENSMUSP00000119035 Gene: ENSMUSG00000040785
Domain | Start | End | E-Value | Type |
Blast:TPR
|
1 |
22 |
1e-6 |
BLAST |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000139513
|
SMART Domains |
Protein: ENSMUSP00000117881 Gene: ENSMUSG00000040785
Domain | Start | End | E-Value | Type |
low complexity region
|
8 |
22 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000143145
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000147046
|
SMART Domains |
Protein: ENSMUSP00000119265 Gene: ENSMUSG00000040785
Domain | Start | End | E-Value | Type |
low complexity region
|
43 |
58 |
N/A |
INTRINSIC |
Pfam:TPR_1
|
175 |
206 |
5.3e-6 |
PFAM |
low complexity region
|
319 |
331 |
N/A |
INTRINSIC |
low complexity region
|
359 |
382 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000150346
|
SMART Domains |
Protein: ENSMUSP00000122726 Gene: ENSMUSG00000040785
Domain | Start | End | E-Value | Type |
low complexity region
|
43 |
58 |
N/A |
INTRINSIC |
Pfam:TPR_1
|
175 |
206 |
9.6e-6 |
PFAM |
low complexity region
|
319 |
331 |
N/A |
INTRINSIC |
coiled coil region
|
364 |
395 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000151770
AA Change: V228A
PolyPhen 2
Score 0.034 (Sensitivity: 0.95; Specificity: 0.82)
|
SMART Domains |
Protein: ENSMUSP00000121349 Gene: ENSMUSG00000040785 AA Change: V228A
Domain | Start | End | E-Value | Type |
TPR
|
231 |
264 |
3.61e-2 |
SMART |
TPR
|
265 |
298 |
3.32e-1 |
SMART |
Blast:TPR
|
300 |
332 |
3e-12 |
BLAST |
low complexity region
|
444 |
459 |
N/A |
INTRINSIC |
TPR
|
576 |
609 |
2.55e-2 |
SMART |
low complexity region
|
720 |
732 |
N/A |
INTRINSIC |
coiled coil region
|
765 |
796 |
N/A |
INTRINSIC |
low complexity region
|
1018 |
1032 |
N/A |
INTRINSIC |
low complexity region
|
1036 |
1050 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000155692
AA Change: V247A
PolyPhen 2
Score 0.126 (Sensitivity: 0.93; Specificity: 0.86)
|
SMART Domains |
Protein: ENSMUSP00000122724 Gene: ENSMUSG00000040785 AA Change: V247A
Domain | Start | End | E-Value | Type |
TPR
|
250 |
283 |
3.61e-2 |
SMART |
TPR
|
284 |
317 |
3.32e-1 |
SMART |
Blast:TPR
|
319 |
351 |
3e-12 |
BLAST |
low complexity region
|
463 |
478 |
N/A |
INTRINSIC |
TPR
|
595 |
628 |
2.55e-2 |
SMART |
low complexity region
|
739 |
751 |
N/A |
INTRINSIC |
coiled coil region
|
784 |
815 |
N/A |
INTRINSIC |
low complexity region
|
1037 |
1051 |
N/A |
INTRINSIC |
low complexity region
|
1055 |
1069 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000232660
AA Change: V228A
PolyPhen 2
Score 0.009 (Sensitivity: 0.96; Specificity: 0.77)
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000232395
AA Change: V228A
PolyPhen 2
Score 0.009 (Sensitivity: 0.96; Specificity: 0.77)
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000231915
AA Change: V228A
PolyPhen 2
Score 0.009 (Sensitivity: 0.96; Specificity: 0.77)
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000153062
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000154243
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000153988
|
SMART Domains |
Protein: ENSMUSP00000118763 Gene: ENSMUSG00000040785
Domain | Start | End | E-Value | Type |
Blast:TPR
|
1 |
22 |
3e-6 |
BLAST |
low complexity region
|
134 |
149 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000231569
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000152117
|
SMART Domains |
Protein: ENSMUSP00000116896 Gene: ENSMUSG00000040785
Domain | Start | End | E-Value | Type |
low complexity region
|
43 |
58 |
N/A |
INTRINSIC |
SCOP:d1ihga1
|
69 |
201 |
6e-8 |
SMART |
Blast:TPR
|
175 |
208 |
1e-14 |
BLAST |
low complexity region
|
319 |
331 |
N/A |
INTRINSIC |
coiled coil region
|
364 |
395 |
N/A |
INTRINSIC |
low complexity region
|
617 |
631 |
N/A |
INTRINSIC |
low complexity region
|
635 |
649 |
N/A |
INTRINSIC |
|
Coding Region Coverage |
- 1x: 99.1%
- 3x: 98.4%
- 10x: 96.4%
- 20x: 92.8%
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 85 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Aebp2 |
G |
A |
6: 140,589,799 (GRCm39) |
|
probably null |
Het |
Arsi |
G |
A |
18: 61,049,723 (GRCm39) |
G202E |
probably benign |
Het |
Atp2b4 |
T |
A |
1: 133,634,518 (GRCm39) |
I1177L |
probably benign |
Het |
Bub3 |
A |
T |
7: 131,163,297 (GRCm39) |
D76V |
probably damaging |
Het |
Cacna2d4 |
G |
A |
6: 119,255,217 (GRCm39) |
R578Q |
possibly damaging |
Het |
Caprin2 |
A |
C |
6: 148,774,509 (GRCm39) |
S268A |
probably benign |
Het |
Card6 |
T |
C |
15: 5,134,623 (GRCm39) |
|
probably null |
Het |
Cdk13 |
A |
G |
13: 17,894,319 (GRCm39) |
S1103P |
probably benign |
Het |
Cfap221 |
T |
C |
1: 119,861,934 (GRCm39) |
T614A |
probably damaging |
Het |
Cfap221 |
T |
A |
1: 119,912,488 (GRCm39) |
Y133F |
probably damaging |
Het |
Clcc1 |
A |
G |
3: 108,584,154 (GRCm39) |
T513A |
probably benign |
Het |
Clec4g |
T |
A |
8: 3,766,419 (GRCm39) |
|
probably benign |
Het |
Cntln |
A |
C |
4: 84,889,466 (GRCm39) |
E316D |
probably benign |
Het |
Cpne2 |
T |
A |
8: 95,290,592 (GRCm39) |
D392E |
probably benign |
Het |
Cry1 |
G |
T |
10: 84,984,634 (GRCm39) |
P147T |
probably damaging |
Het |
Cyp4a29 |
T |
C |
4: 115,110,078 (GRCm39) |
V440A |
probably benign |
Het |
Ddx46 |
A |
G |
13: 55,786,012 (GRCm39) |
D64G |
unknown |
Het |
Dhx34 |
A |
G |
7: 15,949,367 (GRCm39) |
S354P |
possibly damaging |
Het |
Ecm2 |
A |
T |
13: 49,676,263 (GRCm39) |
I327F |
possibly damaging |
Het |
Elavl3 |
T |
C |
9: 21,937,614 (GRCm39) |
K189E |
possibly damaging |
Het |
Enam |
A |
T |
5: 88,636,593 (GRCm39) |
R82* |
probably null |
Het |
Erf |
A |
G |
7: 24,945,636 (GRCm39) |
V45A |
probably damaging |
Het |
Fat3 |
T |
A |
9: 15,932,626 (GRCm39) |
I1436F |
probably benign |
Het |
Flnc |
T |
C |
6: 29,447,889 (GRCm39) |
Y1231H |
probably damaging |
Het |
Ggta1 |
T |
A |
2: 35,292,803 (GRCm39) |
H180L |
possibly damaging |
Het |
Grin2c |
T |
C |
11: 115,151,616 (GRCm39) |
T115A |
probably damaging |
Het |
H6pd |
C |
T |
4: 150,067,235 (GRCm39) |
V384M |
possibly damaging |
Het |
Hba-x |
A |
G |
11: 32,227,008 (GRCm39) |
E39G |
probably benign |
Het |
Hnrnpul2 |
C |
T |
19: 8,807,191 (GRCm39) |
P618S |
probably benign |
Het |
Hpse2 |
C |
T |
19: 42,777,396 (GRCm39) |
R590H |
probably damaging |
Het |
Ighv1-54 |
C |
A |
12: 115,157,423 (GRCm39) |
G75C |
probably damaging |
Het |
Ighv8-11 |
C |
A |
12: 115,530,774 (GRCm39) |
R118L |
possibly damaging |
Het |
Iqcm |
A |
T |
8: 76,615,228 (GRCm39) |
R436S |
possibly damaging |
Het |
Islr |
T |
C |
9: 58,064,889 (GRCm39) |
D206G |
probably damaging |
Het |
Itih1 |
A |
G |
14: 30,658,658 (GRCm39) |
|
probably null |
Het |
Jam2 |
G |
A |
16: 84,598,490 (GRCm39) |
D34N |
probably benign |
Het |
Klhl14 |
A |
T |
18: 21,691,029 (GRCm39) |
|
probably null |
Het |
Lama2 |
TTTGCGCATT |
TTT |
10: 26,919,639 (GRCm39) |
|
probably null |
Het |
Lrrc66 |
A |
G |
5: 73,765,910 (GRCm39) |
F378L |
probably benign |
Het |
Map10 |
T |
A |
8: 126,397,431 (GRCm39) |
Y275N |
probably damaging |
Het |
Mpi |
T |
C |
9: 57,452,590 (GRCm39) |
Y314C |
probably damaging |
Het |
Mpp3 |
A |
G |
11: 101,915,962 (GRCm39) |
Y55H |
probably benign |
Het |
Nectin4 |
T |
C |
1: 171,212,383 (GRCm39) |
V327A |
possibly damaging |
Het |
Nlrp12 |
T |
A |
7: 3,289,072 (GRCm39) |
D480V |
probably damaging |
Het |
Nolc1 |
GAGCAGCAGCAGCAGCAGCAGCAGCAGC |
GAGCAGCAGCAGCAGCAGCAGCAGC |
19: 46,071,594 (GRCm39) |
|
probably benign |
Het |
Notch2 |
A |
T |
3: 98,009,735 (GRCm39) |
Y554F |
probably damaging |
Het |
Nrsn2 |
T |
C |
2: 152,211,531 (GRCm39) |
K167E |
probably benign |
Het |
Olr1 |
T |
A |
6: 129,470,559 (GRCm39) |
K203* |
probably null |
Het |
Or14j8 |
A |
T |
17: 38,262,962 (GRCm39) |
S318T |
probably benign |
Het |
Or2ag13 |
T |
A |
7: 106,473,177 (GRCm39) |
I92F |
probably damaging |
Het |
Or5b117 |
T |
C |
19: 13,431,885 (GRCm39) |
|
probably null |
Het |
Or8b3 |
A |
T |
9: 38,314,764 (GRCm39) |
N195I |
probably damaging |
Het |
Or9i2 |
T |
A |
19: 13,815,643 (GRCm39) |
E298V |
probably damaging |
Het |
Osbpl9 |
T |
C |
4: 108,925,564 (GRCm39) |
N485S |
probably benign |
Het |
Pbk |
T |
A |
14: 66,052,650 (GRCm39) |
H164Q |
probably damaging |
Het |
Pfn2 |
G |
T |
3: 57,754,874 (GRCm39) |
N10K |
probably damaging |
Het |
Pik3ca |
A |
G |
3: 32,491,312 (GRCm39) |
D133G |
probably damaging |
Het |
Pramel27 |
G |
T |
4: 143,579,873 (GRCm39) |
R486L |
probably benign |
Het |
Prl6a1 |
A |
T |
13: 27,502,983 (GRCm39) |
D193V |
probably damaging |
Het |
Rad21 |
G |
T |
15: 51,831,896 (GRCm39) |
P395Q |
probably damaging |
Het |
Reps1 |
T |
A |
10: 17,999,373 (GRCm39) |
I720N |
probably damaging |
Het |
Rpn2 |
T |
C |
2: 157,159,964 (GRCm39) |
|
probably null |
Het |
Rreb1 |
G |
A |
13: 38,115,034 (GRCm39) |
V798M |
possibly damaging |
Het |
Sardh |
C |
T |
2: 27,134,489 (GRCm39) |
R9H |
probably benign |
Het |
Scgb3a2 |
C |
T |
18: 43,899,819 (GRCm39) |
P36S |
probably damaging |
Het |
Scn10a |
C |
A |
9: 119,523,375 (GRCm39) |
G6V |
possibly damaging |
Het |
Scn10a |
C |
T |
9: 119,523,376 (GRCm39) |
G6R |
possibly damaging |
Het |
Scn3a |
T |
C |
2: 65,291,376 (GRCm39) |
D1790G |
probably damaging |
Het |
Sec24b |
A |
T |
3: 129,777,619 (GRCm39) |
H1226Q |
probably benign |
Het |
Shroom3 |
G |
T |
5: 93,090,945 (GRCm39) |
V1151F |
probably damaging |
Het |
Slc12a3 |
G |
A |
8: 95,078,438 (GRCm39) |
|
probably null |
Het |
Slitrk6 |
T |
C |
14: 110,989,315 (GRCm39) |
T131A |
probably damaging |
Het |
Spata1 |
C |
G |
3: 146,175,529 (GRCm39) |
D326H |
probably damaging |
Het |
Tex52 |
A |
T |
6: 128,361,951 (GRCm39) |
|
probably null |
Het |
Tma16 |
A |
C |
8: 66,934,129 (GRCm39) |
C75W |
probably damaging |
Het |
Tmem67 |
G |
A |
4: 12,089,416 (GRCm39) |
|
probably benign |
Het |
Trgv4 |
T |
C |
13: 19,369,236 (GRCm39) |
V29A |
probably benign |
Het |
Trmt10a |
A |
T |
3: 137,854,146 (GRCm39) |
K75* |
probably null |
Het |
Ttn |
T |
C |
2: 76,561,644 (GRCm39) |
D28954G |
probably damaging |
Het |
Uggt2 |
A |
G |
14: 119,273,376 (GRCm39) |
|
probably null |
Het |
Vars1 |
T |
A |
17: 35,234,702 (GRCm39) |
V1177E |
probably benign |
Het |
Vmn1r59 |
T |
C |
7: 5,457,532 (GRCm39) |
D76G |
possibly damaging |
Het |
Vmn2r114 |
G |
T |
17: 23,527,008 (GRCm39) |
A508E |
probably benign |
Het |
Vps41 |
G |
A |
13: 19,013,425 (GRCm39) |
V348M |
probably damaging |
Het |
Zbtb43 |
T |
C |
2: 33,343,944 (GRCm39) |
H427R |
probably damaging |
Het |
|
Other mutations in Ttc3 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00944:Ttc3
|
APN |
16 |
94,227,620 (GRCm39) |
splice site |
probably null |
|
IGL00979:Ttc3
|
APN |
16 |
94,257,577 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01520:Ttc3
|
APN |
16 |
94,191,066 (GRCm39) |
missense |
probably benign |
0.04 |
IGL01663:Ttc3
|
APN |
16 |
94,210,590 (GRCm39) |
critical splice donor site |
probably null |
|
IGL01720:Ttc3
|
APN |
16 |
94,186,228 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL01736:Ttc3
|
APN |
16 |
94,243,386 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL02045:Ttc3
|
APN |
16 |
94,210,540 (GRCm39) |
splice site |
probably benign |
|
IGL02203:Ttc3
|
APN |
16 |
94,219,457 (GRCm39) |
splice site |
probably benign |
|
IGL02327:Ttc3
|
APN |
16 |
94,248,967 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02794:Ttc3
|
APN |
16 |
94,268,785 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02898:Ttc3
|
APN |
16 |
94,220,285 (GRCm39) |
missense |
probably damaging |
1.00 |
PIT4378001:Ttc3
|
UTSW |
16 |
94,211,765 (GRCm39) |
missense |
probably benign |
0.01 |
R0064:Ttc3
|
UTSW |
16 |
94,223,106 (GRCm39) |
missense |
possibly damaging |
0.79 |
R0098:Ttc3
|
UTSW |
16 |
94,191,124 (GRCm39) |
missense |
probably benign |
0.02 |
R0112:Ttc3
|
UTSW |
16 |
94,186,181 (GRCm39) |
splice site |
probably benign |
|
R0135:Ttc3
|
UTSW |
16 |
94,263,127 (GRCm39) |
missense |
possibly damaging |
0.92 |
R0480:Ttc3
|
UTSW |
16 |
94,232,863 (GRCm39) |
nonsense |
probably null |
|
R0513:Ttc3
|
UTSW |
16 |
94,227,071 (GRCm39) |
missense |
probably damaging |
1.00 |
R0532:Ttc3
|
UTSW |
16 |
94,188,189 (GRCm39) |
splice site |
probably benign |
|
R0607:Ttc3
|
UTSW |
16 |
94,257,644 (GRCm39) |
nonsense |
probably null |
|
R0742:Ttc3
|
UTSW |
16 |
94,260,739 (GRCm39) |
missense |
probably benign |
0.23 |
R0905:Ttc3
|
UTSW |
16 |
94,257,648 (GRCm39) |
nonsense |
probably null |
|
R1118:Ttc3
|
UTSW |
16 |
94,217,127 (GRCm39) |
splice site |
probably benign |
|
R1355:Ttc3
|
UTSW |
16 |
94,219,496 (GRCm39) |
missense |
possibly damaging |
0.46 |
R1370:Ttc3
|
UTSW |
16 |
94,219,496 (GRCm39) |
missense |
possibly damaging |
0.46 |
R1486:Ttc3
|
UTSW |
16 |
94,248,988 (GRCm39) |
missense |
probably damaging |
1.00 |
R1598:Ttc3
|
UTSW |
16 |
94,223,156 (GRCm39) |
missense |
probably damaging |
1.00 |
R1641:Ttc3
|
UTSW |
16 |
94,244,176 (GRCm39) |
missense |
probably benign |
0.19 |
R2092:Ttc3
|
UTSW |
16 |
94,243,691 (GRCm39) |
missense |
probably benign |
0.02 |
R2232:Ttc3
|
UTSW |
16 |
94,260,831 (GRCm39) |
missense |
probably benign |
0.00 |
R2339:Ttc3
|
UTSW |
16 |
94,232,857 (GRCm39) |
missense |
probably damaging |
1.00 |
R2342:Ttc3
|
UTSW |
16 |
94,232,857 (GRCm39) |
missense |
probably damaging |
1.00 |
R2842:Ttc3
|
UTSW |
16 |
94,232,857 (GRCm39) |
missense |
probably damaging |
1.00 |
R3117:Ttc3
|
UTSW |
16 |
94,243,422 (GRCm39) |
missense |
possibly damaging |
0.51 |
R4194:Ttc3
|
UTSW |
16 |
94,223,136 (GRCm39) |
missense |
probably damaging |
0.99 |
R4329:Ttc3
|
UTSW |
16 |
94,267,820 (GRCm39) |
missense |
probably damaging |
1.00 |
R4431:Ttc3
|
UTSW |
16 |
94,211,817 (GRCm39) |
critical splice donor site |
probably null |
|
R4530:Ttc3
|
UTSW |
16 |
94,267,736 (GRCm39) |
intron |
probably benign |
|
R4531:Ttc3
|
UTSW |
16 |
94,267,736 (GRCm39) |
intron |
probably benign |
|
R4532:Ttc3
|
UTSW |
16 |
94,267,736 (GRCm39) |
intron |
probably benign |
|
R4533:Ttc3
|
UTSW |
16 |
94,267,736 (GRCm39) |
intron |
probably benign |
|
R4588:Ttc3
|
UTSW |
16 |
94,243,760 (GRCm39) |
missense |
probably benign |
0.01 |
R4625:Ttc3
|
UTSW |
16 |
94,189,131 (GRCm39) |
nonsense |
probably null |
|
R4676:Ttc3
|
UTSW |
16 |
94,243,620 (GRCm39) |
missense |
probably damaging |
1.00 |
R4700:Ttc3
|
UTSW |
16 |
94,240,100 (GRCm39) |
splice site |
probably null |
|
R4867:Ttc3
|
UTSW |
16 |
94,255,374 (GRCm39) |
missense |
probably damaging |
0.96 |
R4885:Ttc3
|
UTSW |
16 |
94,220,324 (GRCm39) |
missense |
probably damaging |
1.00 |
R4885:Ttc3
|
UTSW |
16 |
94,227,690 (GRCm39) |
critical splice donor site |
probably null |
|
R4899:Ttc3
|
UTSW |
16 |
94,230,314 (GRCm39) |
missense |
probably damaging |
1.00 |
R4997:Ttc3
|
UTSW |
16 |
94,253,841 (GRCm39) |
missense |
probably damaging |
1.00 |
R5023:Ttc3
|
UTSW |
16 |
94,230,218 (GRCm39) |
missense |
probably benign |
0.01 |
R5105:Ttc3
|
UTSW |
16 |
94,267,793 (GRCm39) |
missense |
possibly damaging |
0.94 |
R5205:Ttc3
|
UTSW |
16 |
94,248,918 (GRCm39) |
missense |
probably benign |
0.07 |
R5287:Ttc3
|
UTSW |
16 |
94,260,703 (GRCm39) |
missense |
probably benign |
0.00 |
R5338:Ttc3
|
UTSW |
16 |
94,184,900 (GRCm39) |
missense |
probably damaging |
0.99 |
R5347:Ttc3
|
UTSW |
16 |
94,230,479 (GRCm39) |
missense |
probably damaging |
1.00 |
R5403:Ttc3
|
UTSW |
16 |
94,260,703 (GRCm39) |
missense |
probably benign |
0.00 |
R5460:Ttc3
|
UTSW |
16 |
94,258,241 (GRCm39) |
missense |
probably benign |
0.32 |
R5739:Ttc3
|
UTSW |
16 |
94,240,183 (GRCm39) |
nonsense |
probably null |
|
R6242:Ttc3
|
UTSW |
16 |
94,243,554 (GRCm39) |
missense |
probably benign |
0.04 |
R6253:Ttc3
|
UTSW |
16 |
94,258,272 (GRCm39) |
critical splice donor site |
probably null |
|
R6455:Ttc3
|
UTSW |
16 |
94,219,482 (GRCm39) |
start codon destroyed |
probably null |
0.83 |
R6559:Ttc3
|
UTSW |
16 |
94,223,208 (GRCm39) |
critical splice donor site |
probably null |
|
R6564:Ttc3
|
UTSW |
16 |
94,243,470 (GRCm39) |
missense |
probably damaging |
1.00 |
R6932:Ttc3
|
UTSW |
16 |
94,244,312 (GRCm39) |
missense |
probably benign |
|
R7331:Ttc3
|
UTSW |
16 |
94,195,218 (GRCm39) |
missense |
probably benign |
0.27 |
R7497:Ttc3
|
UTSW |
16 |
94,219,541 (GRCm39) |
missense |
possibly damaging |
0.93 |
R7610:Ttc3
|
UTSW |
16 |
94,228,697 (GRCm39) |
missense |
probably benign |
0.11 |
R7738:Ttc3
|
UTSW |
16 |
94,188,241 (GRCm39) |
missense |
probably benign |
0.00 |
R7970:Ttc3
|
UTSW |
16 |
94,258,223 (GRCm39) |
missense |
probably damaging |
1.00 |
R8052:Ttc3
|
UTSW |
16 |
94,268,848 (GRCm39) |
missense |
probably benign |
0.09 |
R8087:Ttc3
|
UTSW |
16 |
94,243,812 (GRCm39) |
missense |
probably benign |
0.00 |
R8309:Ttc3
|
UTSW |
16 |
94,267,838 (GRCm39) |
missense |
probably damaging |
1.00 |
R8320:Ttc3
|
UTSW |
16 |
94,219,535 (GRCm39) |
missense |
probably damaging |
1.00 |
R8322:Ttc3
|
UTSW |
16 |
94,255,351 (GRCm39) |
missense |
probably damaging |
1.00 |
R8518:Ttc3
|
UTSW |
16 |
94,258,238 (GRCm39) |
missense |
probably benign |
0.21 |
R8670:Ttc3
|
UTSW |
16 |
94,191,067 (GRCm39) |
missense |
probably damaging |
0.99 |
R8826:Ttc3
|
UTSW |
16 |
94,232,829 (GRCm39) |
missense |
possibly damaging |
0.85 |
R8868:Ttc3
|
UTSW |
16 |
94,252,002 (GRCm39) |
missense |
probably benign |
0.00 |
R8873:Ttc3
|
UTSW |
16 |
94,243,842 (GRCm39) |
missense |
probably damaging |
0.97 |
R8940:Ttc3
|
UTSW |
16 |
94,230,358 (GRCm39) |
missense |
possibly damaging |
0.94 |
R8993:Ttc3
|
UTSW |
16 |
94,228,667 (GRCm39) |
missense |
possibly damaging |
0.85 |
R9068:Ttc3
|
UTSW |
16 |
94,204,219 (GRCm39) |
missense |
probably damaging |
1.00 |
R9119:Ttc3
|
UTSW |
16 |
94,192,950 (GRCm39) |
missense |
probably damaging |
0.98 |
R9124:Ttc3
|
UTSW |
16 |
94,236,389 (GRCm39) |
missense |
probably benign |
0.00 |
R9129:Ttc3
|
UTSW |
16 |
94,185,208 (GRCm39) |
missense |
probably benign |
0.02 |
R9189:Ttc3
|
UTSW |
16 |
94,268,831 (GRCm39) |
missense |
possibly damaging |
0.62 |
R9217:Ttc3
|
UTSW |
16 |
94,230,467 (GRCm39) |
missense |
possibly damaging |
0.80 |
R9490:Ttc3
|
UTSW |
16 |
94,245,360 (GRCm39) |
missense |
probably benign |
|
R9564:Ttc3
|
UTSW |
16 |
94,248,918 (GRCm39) |
missense |
probably benign |
0.07 |
R9631:Ttc3
|
UTSW |
16 |
94,171,581 (GRCm39) |
intron |
probably benign |
|
X0022:Ttc3
|
UTSW |
16 |
94,243,384 (GRCm39) |
missense |
probably benign |
0.00 |
Y5378:Ttc3
|
UTSW |
16 |
94,212,988 (GRCm39) |
splice site |
probably null |
|
|
Predicted Primers |
PCR Primer
(F):5'- ACTGTATTCCCAGCCCCAAG -3'
(R):5'- CCCAGTAAGGCCGTTATCAAAG -3'
Sequencing Primer
(F):5'- GTATTCCCAGCCCCAAGATTTTAC -3'
(R):5'- GTAAGGCCGTTATCAAAGAATACC -3'
|
Posted On |
2016-03-01 |