Incidental Mutation 'R4880:Pcdhgb5'
ID |
375258 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Pcdhgb5
|
Ensembl Gene |
ENSMUSG00000103749 |
Gene Name |
protocadherin gamma subfamily B, 5 |
Synonyms |
|
MMRRC Submission |
042489-MU
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.140)
|
Stock # |
R4880 (G1)
|
Quality Score |
225 |
Status
|
Validated
|
Chromosome |
18 |
Chromosomal Location |
37864062-37974926 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
T to G
at 37865641 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Serine to Alanine
at position 479
(S479A)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000142010
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000066149]
[ENSMUST00000073447]
[ENSMUST00000091935]
[ENSMUST00000115661]
[ENSMUST00000192511]
[ENSMUST00000192535]
[ENSMUST00000195363]
[ENSMUST00000195112]
[ENSMUST00000194544]
[ENSMUST00000194190]
[ENSMUST00000194418]
[ENSMUST00000193414]
[ENSMUST00000193869]
[ENSMUST00000192931]
[ENSMUST00000195823]
|
AlphaFold |
Q91XX5 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000066149
|
SMART Domains |
Protein: ENSMUSP00000067728 Gene: ENSMUSG00000103897
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
29 |
N/A |
INTRINSIC |
CA
|
31 |
131 |
4.84e-2 |
SMART |
CA
|
155 |
240 |
1.48e-22 |
SMART |
CA
|
264 |
345 |
1.14e-23 |
SMART |
CA
|
369 |
450 |
9.44e-21 |
SMART |
CA
|
474 |
560 |
1.03e-26 |
SMART |
CA
|
591 |
669 |
3.64e-13 |
SMART |
Pfam:Cadherin_C_2
|
688 |
772 |
3e-25 |
PFAM |
Pfam:Cadherin_tail
|
809 |
932 |
8.1e-38 |
PFAM |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000073447
|
SMART Domains |
Protein: ENSMUSP00000073150 Gene: ENSMUSG00000104346
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
22 |
N/A |
INTRINSIC |
CA
|
42 |
128 |
2.15e-2 |
SMART |
CA
|
152 |
237 |
4.8e-13 |
SMART |
CA
|
261 |
342 |
9.36e-25 |
SMART |
CA
|
366 |
447 |
6.62e-25 |
SMART |
CA
|
471 |
557 |
6.72e-26 |
SMART |
CA
|
588 |
666 |
2.15e-15 |
SMART |
Pfam:Cadherin_C_2
|
685 |
768 |
4.8e-24 |
PFAM |
Pfam:Cadherin_tail
|
805 |
928 |
8.1e-38 |
PFAM |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000091935
|
SMART Domains |
Protein: ENSMUSP00000089555 Gene: ENSMUSG00000102440
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
29 |
N/A |
INTRINSIC |
CA
|
32 |
132 |
8.37e-3 |
SMART |
CA
|
156 |
241 |
5.51e-22 |
SMART |
CA
|
265 |
346 |
8.27e-26 |
SMART |
CA
|
370 |
451 |
1.4e-23 |
SMART |
CA
|
475 |
561 |
2.97e-27 |
SMART |
CA
|
592 |
670 |
1.18e-12 |
SMART |
Pfam:Cadherin_C_2
|
688 |
772 |
3.9e-24 |
PFAM |
Pfam:Cadherin_tail
|
809 |
932 |
8.1e-38 |
PFAM |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000115661
|
SMART Domains |
Protein: ENSMUSP00000111325 Gene: ENSMUSG00000103458
Domain | Start | End | E-Value | Type |
CA
|
20 |
131 |
5.3e-2 |
SMART |
CA
|
155 |
240 |
1.51e-19 |
SMART |
CA
|
264 |
348 |
7.6e-25 |
SMART |
CA
|
372 |
453 |
1.42e-24 |
SMART |
CA
|
477 |
563 |
1.42e-24 |
SMART |
CA
|
594 |
674 |
4.12e-12 |
SMART |
low complexity region
|
706 |
721 |
N/A |
INTRINSIC |
Pfam:Cadherin_tail
|
796 |
930 |
3.9e-58 |
PFAM |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000192511
|
SMART Domains |
Protein: ENSMUSP00000141704 Gene: ENSMUSG00000103472
Domain | Start | End | E-Value | Type |
CA
|
47 |
133 |
1.57e-2 |
SMART |
CA
|
157 |
242 |
3.24e-19 |
SMART |
CA
|
266 |
347 |
3.21e-23 |
SMART |
CA
|
371 |
452 |
9.08e-23 |
SMART |
CA
|
476 |
562 |
1.32e-24 |
SMART |
CA
|
593 |
671 |
3.5e-15 |
SMART |
transmembrane domain
|
694 |
716 |
N/A |
INTRINSIC |
low complexity region
|
916 |
935 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000192535
AA Change: S479A
PolyPhen 2
Score 0.002 (Sensitivity: 0.99; Specificity: 0.30)
|
SMART Domains |
Protein: ENSMUSP00000142010 Gene: ENSMUSG00000103749 AA Change: S479A
Domain | Start | End | E-Value | Type |
low complexity region
|
17 |
25 |
N/A |
INTRINSIC |
CA
|
56 |
131 |
8e-3 |
SMART |
CA
|
155 |
240 |
2.49e-20 |
SMART |
CA
|
264 |
341 |
4.97e-29 |
SMART |
CA
|
365 |
446 |
1.09e-25 |
SMART |
CA
|
470 |
556 |
1.75e-24 |
SMART |
CA
|
587 |
668 |
9.18e-10 |
SMART |
transmembrane domain
|
687 |
709 |
N/A |
INTRINSIC |
low complexity region
|
907 |
926 |
N/A |
INTRINSIC |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000193006
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000195069
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000194814
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000195363
|
SMART Domains |
Protein: ENSMUSP00000142227 Gene: ENSMUSG00000103585
Domain | Start | End | E-Value | Type |
low complexity region
|
17 |
25 |
N/A |
INTRINSIC |
CA
|
56 |
131 |
1.47e-2 |
SMART |
CA
|
155 |
240 |
1.23e-19 |
SMART |
CA
|
264 |
343 |
5.54e-27 |
SMART |
CA
|
367 |
448 |
5.09e-26 |
SMART |
CA
|
472 |
558 |
1.98e-23 |
SMART |
CA
|
589 |
670 |
1.3e-9 |
SMART |
transmembrane domain
|
689 |
711 |
N/A |
INTRINSIC |
low complexity region
|
893 |
912 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000195112
|
SMART Domains |
Protein: ENSMUSP00000141449 Gene: ENSMUSG00000102748
Domain | Start | End | E-Value | Type |
CA
|
24 |
130 |
8.18e-3 |
SMART |
CA
|
154 |
239 |
1.39e-18 |
SMART |
CA
|
263 |
344 |
7.91e-23 |
SMART |
CA
|
368 |
449 |
2.27e-23 |
SMART |
CA
|
473 |
559 |
1.24e-24 |
SMART |
CA
|
590 |
671 |
1.3e-9 |
SMART |
transmembrane domain
|
690 |
712 |
N/A |
INTRINSIC |
low complexity region
|
909 |
928 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000194544
|
SMART Domains |
Protein: ENSMUSP00000141847 Gene: ENSMUSG00000102836
Domain | Start | End | E-Value | Type |
Blast:CA
|
18 |
66 |
5e-20 |
BLAST |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000194190
|
SMART Domains |
Protein: ENSMUSP00000142062 Gene: ENSMUSG00000103144
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
28 |
N/A |
INTRINSIC |
CA
|
31 |
131 |
3.16e-2 |
SMART |
CA
|
155 |
240 |
5.39e-16 |
SMART |
CA
|
264 |
345 |
6.72e-26 |
SMART |
CA
|
369 |
450 |
1.32e-24 |
SMART |
CA
|
474 |
560 |
4.17e-22 |
SMART |
CA
|
591 |
669 |
4.48e-13 |
SMART |
transmembrane domain
|
692 |
714 |
N/A |
INTRINSIC |
low complexity region
|
912 |
931 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000194418
|
SMART Domains |
Protein: ENSMUSP00000142140 Gene: ENSMUSG00000103677
Domain | Start | End | E-Value | Type |
CA
|
44 |
130 |
1.64e-2 |
SMART |
CA
|
154 |
239 |
3.93e-18 |
SMART |
CA
|
263 |
344 |
5.22e-23 |
SMART |
CA
|
368 |
449 |
5.02e-25 |
SMART |
CA
|
473 |
559 |
2.07e-26 |
SMART |
CA
|
590 |
668 |
6.84e-18 |
SMART |
transmembrane domain
|
690 |
712 |
N/A |
INTRINSIC |
low complexity region
|
911 |
930 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000193414
|
SMART Domains |
Protein: ENSMUSP00000141893 Gene: ENSMUSG00000103567
Domain | Start | End | E-Value | Type |
CA
|
45 |
131 |
2.45e-1 |
SMART |
CA
|
155 |
240 |
1.05e-18 |
SMART |
CA
|
264 |
345 |
6.52e-24 |
SMART |
CA
|
369 |
450 |
5.99e-23 |
SMART |
CA
|
474 |
560 |
6.99e-24 |
SMART |
CA
|
591 |
669 |
5.31e-15 |
SMART |
transmembrane domain
|
692 |
714 |
N/A |
INTRINSIC |
low complexity region
|
913 |
932 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000193869
|
SMART Domains |
Protein: ENSMUSP00000141482 Gene: ENSMUSG00000103332
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
28 |
N/A |
INTRINSIC |
CA
|
45 |
131 |
1.64e-2 |
SMART |
CA
|
155 |
240 |
6.42e-23 |
SMART |
CA
|
264 |
345 |
1.76e-20 |
SMART |
CA
|
369 |
450 |
2.27e-23 |
SMART |
CA
|
474 |
560 |
1.5e-23 |
SMART |
CA
|
591 |
669 |
1.17e-16 |
SMART |
transmembrane domain
|
692 |
714 |
N/A |
INTRINSIC |
low complexity region
|
912 |
931 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000193984
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000192931
|
SMART Domains |
Protein: ENSMUSP00000141348 Gene: ENSMUSG00000103037
Domain | Start | End | E-Value | Type |
CA
|
36 |
119 |
8e-3 |
SMART |
CA
|
143 |
228 |
1.34e-20 |
SMART |
CA
|
252 |
333 |
1.52e-24 |
SMART |
CA
|
357 |
438 |
9.22e-24 |
SMART |
CA
|
462 |
548 |
1.24e-24 |
SMART |
CA
|
579 |
660 |
1.3e-9 |
SMART |
transmembrane domain
|
679 |
701 |
N/A |
INTRINSIC |
low complexity region
|
899 |
918 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000195823
|
SMART Domains |
Protein: ENSMUSP00000141803 Gene: ENSMUSG00000103793
Domain | Start | End | E-Value | Type |
low complexity region
|
13 |
24 |
N/A |
INTRINSIC |
CA
|
45 |
131 |
2.41e-2 |
SMART |
CA
|
155 |
240 |
5.77e-16 |
SMART |
CA
|
264 |
345 |
1.1e-21 |
SMART |
CA
|
369 |
450 |
2.75e-22 |
SMART |
low complexity region
|
453 |
462 |
N/A |
INTRINSIC |
CA
|
474 |
560 |
9.22e-24 |
SMART |
CA
|
591 |
669 |
2.4e-13 |
SMART |
transmembrane domain
|
692 |
714 |
N/A |
INTRINSIC |
low complexity region
|
913 |
932 |
N/A |
INTRINSIC |
|
Meta Mutation Damage Score |
0.0898 |
Coding Region Coverage |
- 1x: 99.1%
- 3x: 98.4%
- 10x: 96.7%
- 20x: 93.5%
|
Validation Efficiency |
98% (89/91) |
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene is a member of the protocadherin gamma gene cluster, one of three related clusters tandemly linked on chromosome five. These gene clusters have an immunoglobulin-like organization, suggesting that a novel mechanism may be involved in their regulation and expression. The gamma gene cluster includes 22 genes divided into 3 subfamilies. Subfamily A contains 12 genes, subfamily B contains 7 genes and 2 pseudogenes, and the more distantly related subfamily C contains 3 genes. The tandem array of 22 large, variable region exons are followed by a constant region, containing 3 exons shared by all genes in the cluster. Each variable region exon encodes the extracellular region, which includes 6 cadherin ectodomains and a transmembrane region. The constant region exons encode the common cytoplasmic region. These neural cadherin-like cell adhesion proteins most likely play a critical role in the establishment and function of specific cell-cell connections in the brain. Alternative splicing has been described for the gamma cluster genes. [provided by RefSeq, Jul 2008]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 76 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
2610021A01Rik |
T |
C |
7: 41,276,529 (GRCm39) |
I744T |
possibly damaging |
Het |
Adgrb1 |
T |
A |
15: 74,458,871 (GRCm39) |
F1324L |
possibly damaging |
Het |
Adm |
A |
G |
7: 110,228,326 (GRCm39) |
H230R |
probably benign |
Het |
Ank2 |
A |
T |
3: 126,840,475 (GRCm39) |
|
probably null |
Het |
Arih1 |
A |
T |
9: 59,344,168 (GRCm39) |
F156L |
possibly damaging |
Het |
Atf6b |
A |
G |
17: 34,873,529 (GRCm39) |
H660R |
probably damaging |
Het |
Bcl9l |
C |
A |
9: 44,420,007 (GRCm39) |
Q1101K |
probably benign |
Het |
Ccdc174 |
G |
A |
6: 91,876,572 (GRCm39) |
|
probably benign |
Het |
Ccdc65 |
A |
C |
15: 98,620,538 (GRCm39) |
|
probably null |
Het |
Cela2a |
T |
C |
4: 141,549,598 (GRCm39) |
N59S |
probably benign |
Het |
Cfap157 |
A |
T |
2: 32,668,261 (GRCm39) |
V393E |
probably damaging |
Het |
Chd1 |
T |
C |
17: 17,594,916 (GRCm39) |
F17S |
probably damaging |
Het |
Cpne3 |
T |
C |
4: 19,540,827 (GRCm39) |
I183V |
probably benign |
Het |
Cyp2d11 |
C |
A |
15: 82,276,306 (GRCm39) |
V122L |
probably benign |
Het |
Dcaf8 |
C |
A |
1: 172,015,056 (GRCm39) |
|
probably benign |
Het |
Dchs1 |
T |
A |
7: 105,404,937 (GRCm39) |
D2535V |
probably benign |
Het |
Eif4a2 |
G |
T |
16: 22,927,650 (GRCm39) |
|
probably benign |
Het |
Fzd4 |
T |
A |
7: 89,057,109 (GRCm39) |
D385E |
probably benign |
Het |
Galnt13 |
C |
A |
2: 54,950,584 (GRCm39) |
Q422K |
probably damaging |
Het |
Gnptab |
C |
T |
10: 88,268,413 (GRCm39) |
Q507* |
probably null |
Het |
Hoxa7 |
A |
G |
6: 52,194,014 (GRCm39) |
|
probably benign |
Het |
Htra1 |
T |
A |
7: 130,563,813 (GRCm39) |
V228D |
probably damaging |
Het |
Idi2l |
A |
T |
13: 8,990,702 (GRCm39) |
|
probably null |
Het |
Ifi203 |
T |
A |
1: 173,756,716 (GRCm39) |
|
probably benign |
Het |
Iqca1l |
T |
C |
5: 24,754,750 (GRCm39) |
D340G |
probably benign |
Het |
Irs1 |
TGGGGTGGACATCGAACTGAAGGAG |
TG |
1: 82,265,453 (GRCm39) |
913 |
probably null |
Het |
Itga2b |
G |
T |
11: 102,348,548 (GRCm39) |
|
probably benign |
Het |
Itgb1 |
G |
T |
8: 129,442,631 (GRCm39) |
R272L |
probably damaging |
Het |
Kif9 |
A |
G |
9: 110,330,703 (GRCm39) |
E343G |
probably damaging |
Het |
Klhl5 |
T |
C |
5: 65,316,244 (GRCm39) |
V97A |
probably damaging |
Het |
Lama5 |
C |
A |
2: 179,818,861 (GRCm39) |
|
probably benign |
Het |
Lamb2 |
A |
G |
9: 108,361,226 (GRCm39) |
|
probably null |
Het |
Lrp1b |
T |
A |
2: 41,660,931 (GRCm39) |
Y59F |
probably benign |
Het |
Mmrn1 |
A |
G |
6: 60,953,423 (GRCm39) |
E568G |
probably benign |
Het |
Mreg |
A |
G |
1: 72,201,495 (GRCm39) |
Y166H |
probably damaging |
Het |
Myh7 |
C |
A |
14: 55,216,045 (GRCm39) |
V1323F |
probably benign |
Het |
Nr1i3 |
T |
A |
1: 171,043,951 (GRCm39) |
I91K |
probably damaging |
Het |
Nsfl1c |
T |
A |
2: 151,348,230 (GRCm39) |
D206E |
probably damaging |
Het |
Or11g24 |
T |
C |
14: 50,662,758 (GRCm39) |
Y261H |
possibly damaging |
Het |
Or13c3 |
A |
T |
4: 52,856,411 (GRCm39) |
M34K |
probably damaging |
Het |
Or2ak5 |
G |
A |
11: 58,611,107 (GRCm39) |
L256F |
probably benign |
Het |
Or4k44 |
A |
T |
2: 111,367,698 (GRCm39) |
L312* |
probably null |
Het |
Or5k17 |
A |
C |
16: 58,746,463 (GRCm39) |
L157W |
probably damaging |
Het |
Or8b54 |
T |
A |
9: 38,686,843 (GRCm39) |
C97* |
probably null |
Het |
Pcdhb7 |
C |
T |
18: 37,475,284 (GRCm39) |
T140I |
probably benign |
Het |
Pcsk5 |
T |
A |
19: 17,425,054 (GRCm39) |
Y1583F |
probably damaging |
Het |
Pias1 |
T |
C |
9: 62,820,080 (GRCm39) |
R296G |
probably benign |
Het |
Plscr1l1 |
A |
G |
9: 92,236,665 (GRCm39) |
E108G |
probably damaging |
Het |
Polr1e |
T |
A |
4: 45,022,280 (GRCm39) |
C100S |
probably damaging |
Het |
Rpap1 |
C |
A |
2: 119,614,346 (GRCm39) |
R17L |
probably damaging |
Het |
Rtn1 |
C |
T |
12: 72,264,232 (GRCm39) |
V192I |
possibly damaging |
Het |
Ryr2 |
G |
A |
13: 11,767,104 (GRCm39) |
P1262L |
probably damaging |
Het |
Slc4a7 |
G |
T |
14: 14,757,342 (GRCm38) |
D396Y |
probably damaging |
Het |
Slc5a8 |
T |
C |
10: 88,727,886 (GRCm39) |
Y118H |
probably damaging |
Het |
Slc7a6os |
T |
A |
8: 106,937,247 (GRCm39) |
Q71L |
probably benign |
Het |
Sphkap |
A |
G |
1: 83,266,538 (GRCm39) |
V127A |
probably damaging |
Het |
Srpk1 |
A |
G |
17: 28,810,199 (GRCm39) |
S580P |
probably damaging |
Het |
Syne2 |
A |
G |
12: 76,026,593 (GRCm39) |
I3474V |
probably damaging |
Het |
Tchh |
A |
G |
3: 93,351,130 (GRCm39) |
D190G |
possibly damaging |
Het |
Tenm4 |
T |
A |
7: 96,555,025 (GRCm39) |
|
probably null |
Het |
Tex14 |
T |
A |
11: 87,377,121 (GRCm39) |
I155N |
possibly damaging |
Het |
Tm7sf3 |
A |
T |
6: 146,511,358 (GRCm39) |
V377E |
possibly damaging |
Het |
Tnfsf9 |
T |
A |
17: 57,412,433 (GRCm39) |
M1K |
probably null |
Het |
Tns2 |
C |
T |
15: 102,020,474 (GRCm39) |
T780I |
probably damaging |
Het |
Trdn |
T |
A |
10: 33,347,575 (GRCm39) |
D639E |
probably benign |
Het |
Trmt10a |
A |
G |
3: 137,857,972 (GRCm39) |
E173G |
possibly damaging |
Het |
Ttn |
G |
A |
2: 76,649,119 (GRCm39) |
P10984S |
possibly damaging |
Het |
Tubb6 |
C |
T |
18: 67,534,386 (GRCm39) |
T95M |
possibly damaging |
Het |
Uroc1 |
G |
T |
6: 90,334,519 (GRCm39) |
R577L |
probably damaging |
Het |
Vmn2r86 |
T |
A |
10: 130,289,484 (GRCm39) |
D137V |
probably benign |
Het |
Xkr7 |
T |
C |
2: 152,896,873 (GRCm39) |
Y576H |
probably damaging |
Het |
Zfp410 |
A |
G |
12: 84,384,449 (GRCm39) |
N355D |
probably damaging |
Het |
Zfp59 |
C |
A |
7: 27,543,742 (GRCm39) |
D22E |
probably damaging |
Het |
Zfp64 |
C |
T |
2: 168,736,297 (GRCm39) |
R460H |
probably damaging |
Het |
Zfp655 |
T |
C |
5: 145,181,168 (GRCm39) |
V342A |
probably damaging |
Het |
Zfp990 |
G |
A |
4: 145,264,490 (GRCm39) |
G496E |
probably benign |
Het |
|
Other mutations in Pcdhgb5 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
R4200:Pcdhgb5
|
UTSW |
18 |
37,865,035 (GRCm39) |
missense |
possibly damaging |
0.77 |
R4205:Pcdhgb5
|
UTSW |
18 |
37,865,716 (GRCm39) |
missense |
possibly damaging |
0.82 |
R5482:Pcdhgb5
|
UTSW |
18 |
37,864,585 (GRCm39) |
missense |
probably damaging |
1.00 |
R5579:Pcdhgb5
|
UTSW |
18 |
37,864,690 (GRCm39) |
missense |
probably benign |
0.25 |
R5683:Pcdhgb5
|
UTSW |
18 |
37,864,907 (GRCm39) |
missense |
probably damaging |
1.00 |
R5699:Pcdhgb5
|
UTSW |
18 |
37,864,970 (GRCm39) |
missense |
probably damaging |
0.99 |
R6127:Pcdhgb5
|
UTSW |
18 |
37,865,932 (GRCm39) |
missense |
probably damaging |
0.99 |
R6216:Pcdhgb5
|
UTSW |
18 |
37,864,981 (GRCm39) |
missense |
probably benign |
0.09 |
R6279:Pcdhgb5
|
UTSW |
18 |
37,865,752 (GRCm39) |
missense |
probably damaging |
1.00 |
R6300:Pcdhgb5
|
UTSW |
18 |
37,865,752 (GRCm39) |
missense |
probably damaging |
1.00 |
R6441:Pcdhgb5
|
UTSW |
18 |
37,865,138 (GRCm39) |
missense |
probably damaging |
1.00 |
R6675:Pcdhgb5
|
UTSW |
18 |
37,864,255 (GRCm39) |
missense |
probably damaging |
1.00 |
R6678:Pcdhgb5
|
UTSW |
18 |
37,864,255 (GRCm39) |
missense |
probably damaging |
1.00 |
R6856:Pcdhgb5
|
UTSW |
18 |
37,866,457 (GRCm39) |
missense |
probably benign |
0.04 |
R6942:Pcdhgb5
|
UTSW |
18 |
37,865,696 (GRCm39) |
missense |
probably damaging |
1.00 |
R6976:Pcdhgb5
|
UTSW |
18 |
37,864,321 (GRCm39) |
missense |
probably damaging |
1.00 |
R6980:Pcdhgb5
|
UTSW |
18 |
37,866,592 (GRCm39) |
missense |
possibly damaging |
0.47 |
R7061:Pcdhgb5
|
UTSW |
18 |
37,864,976 (GRCm39) |
missense |
probably benign |
0.25 |
R7506:Pcdhgb5
|
UTSW |
18 |
37,865,525 (GRCm39) |
missense |
probably damaging |
1.00 |
R7698:Pcdhgb5
|
UTSW |
18 |
37,865,684 (GRCm39) |
missense |
probably damaging |
1.00 |
R7760:Pcdhgb5
|
UTSW |
18 |
37,864,690 (GRCm39) |
missense |
not run |
|
R7776:Pcdhgb5
|
UTSW |
18 |
37,866,007 (GRCm39) |
missense |
probably damaging |
1.00 |
R8117:Pcdhgb5
|
UTSW |
18 |
37,866,302 (GRCm39) |
missense |
probably damaging |
1.00 |
R8273:Pcdhgb5
|
UTSW |
18 |
37,865,240 (GRCm39) |
missense |
probably benign |
0.28 |
R8836:Pcdhgb5
|
UTSW |
18 |
37,865,260 (GRCm39) |
missense |
probably benign |
0.30 |
R8854:Pcdhgb5
|
UTSW |
18 |
37,865,501 (GRCm39) |
missense |
probably benign |
0.00 |
R9063:Pcdhgb5
|
UTSW |
18 |
37,864,739 (GRCm39) |
missense |
probably damaging |
1.00 |
R9420:Pcdhgb5
|
UTSW |
18 |
37,864,838 (GRCm39) |
missense |
probably benign |
0.10 |
R9490:Pcdhgb5
|
UTSW |
18 |
37,865,240 (GRCm39) |
missense |
probably benign |
0.28 |
R9567:Pcdhgb5
|
UTSW |
18 |
37,864,982 (GRCm39) |
missense |
probably damaging |
0.99 |
R9620:Pcdhgb5
|
UTSW |
18 |
37,864,486 (GRCm39) |
nonsense |
probably null |
|
R9655:Pcdhgb5
|
UTSW |
18 |
37,865,122 (GRCm39) |
nonsense |
probably null |
|
|
Predicted Primers |
PCR Primer
(F):5'- GAATACAATGTGACCATTACGGCC -3'
(R):5'- TCGAGCGCGGGATACAAAAC -3'
Sequencing Primer
(F):5'- CATTACGGCCACTGACAGAGG -3'
(R):5'- ATGCTCACGTTGGCGCTG -3'
|
Posted On |
2016-03-17 |