Mutagenetix > Incidental Mutation

Incidental Mutation 'R4921:Adam3'

378587

Institutional Source

Beutler Lab

Gene Symbol

Adam3

Ensembl Gene

ENSMUSG00000031553

Gene Name

a disintegrin and metallopeptidase domain 3 (cyritestin)

Synonyms

ADAM3, Taz83, Taz83, Cyrn1, tMDC

MMRRC Submission

042523-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R4921 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

24677225-24725852 bp(-) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 24684614 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Methionine to Valine at position 712 (M712V)

Ref Sequence

ENSEMBL: ENSMUSP00000132651 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000033958] [ENSMUST00000167431] [ENSMUST00000170318] [ENSMUST00000171438]

AlphaFold

F8VQ03

Predicted Effect

probably benign
Transcript: ENSMUST00000033958
AA Change: M712V

PolyPhen 2 Score 0.008 (Sensitivity: 0.96; Specificity: 0.76)

SMART Domains

Protein: ENSMUSP00000033958
Gene: ENSMUSG00000031553
AA Change: M712V

Domain	Start	End	E-Value	Type
signal peptide	1	16	N/A	INTRINSIC
Pfam:Pep_M12B_propep	26	144	3.8e-30	PFAM
Pfam:Reprolysin_5	185	361	6.8e-9	PFAM
Pfam:Reprolysin	187	384	1.6e-64	PFAM
Pfam:Reprolysin_3	211	333	1.2e-8	PFAM
DISIN	404	482	5.58e-32	SMART
ACR	483	614	4.1e-50	SMART
EGF	622	653	1.66e1	SMART
transmembrane domain	689	709	N/A	INTRINSIC

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000158677

Predicted Effect

probably benign
Transcript: ENSMUST00000167431

SMART Domains

Protein: ENSMUSP00000127479
Gene: ENSMUSG00000031553

Domain	Start	End	E-Value	Type
low complexity region	56	67	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000170318

SMART Domains

Protein: ENSMUSP00000132620
Gene: ENSMUSG00000031553

Domain	Start	End	E-Value	Type
signal peptide	1	16	N/A	INTRINSIC
Pfam:Pep_M12B_propep	26	118	1.3e-19	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000171438
AA Change: M712V

PolyPhen 2 Score 0.008 (Sensitivity: 0.96; Specificity: 0.76)

SMART Domains

Protein: ENSMUSP00000132651
Gene: ENSMUSG00000031553
AA Change: M712V

Domain	Start	End	E-Value	Type
signal peptide	1	16	N/A	INTRINSIC
Pfam:Pep_M12B_propep	23	144	2.4e-22	PFAM
Pfam:Reprolysin_5	185	361	7.8e-9	PFAM
Pfam:Reprolysin	187	384	4.1e-64	PFAM
Pfam:Reprolysin_3	211	321	1e-8	PFAM
DISIN	404	482	5.58e-32	SMART
ACR	483	614	4.1e-50	SMART
EGF	622	653	1.66e1	SMART
transmembrane domain	689	709	N/A	INTRINSIC

Coding Region Coverage

1x: 99.0%
3x: 98.1%
10x: 95.7%
20x: 90.3%

Validation Efficiency

MGI Phenotype

PHENOTYPE: Mice homozygous for targeted mutations that inactivate the gene are male infertile, due to the inability of the sperm to bind to the zona pellucida. If the zona pellucida is removed sperm-egg membrane fusion happens as expected. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 98 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4930522L14Rik	A	T	5: 109,737,796	N65K	probably benign	Het
Abcc9	T	C	6: 142,590,436	Y1524C	probably benign	Het
Acap1	A	G	11: 69,887,193	I102T	probably damaging	Het
Acvr2a	T	C	2: 48,893,541	V284A	possibly damaging	Het
Adck1	T	C	12: 88,441,138	V213A	probably benign	Het
Adgrl3	G	T	5: 81,512,110	W242L	probably damaging	Het
Alk	T	C	17: 71,904,315	T857A	probably benign	Het
Alms1	A	G	6: 85,628,546	T2393A	probably benign	Het
Ank3	C	T	10: 70,002,109	P240L	probably damaging	Het
Ankrd35	C	A	3: 96,684,824	L809M	possibly damaging	Het
Birc6	T	A	17: 74,650,099	L3690Q	probably damaging	Het
Bmp3	C	A	5: 98,872,061	F114L	probably damaging	Het
Cage1	G	A	13: 38,019,208	H627Y	probably benign	Het
Cars	T	C	7: 143,569,475	D468G	probably damaging	Het
Ccdc148	T	C	2: 58,829,802	E487G	probably damaging	Het
Ccdc80	A	T	16: 45,118,167	I746F	probably damaging	Het
Ccl25	A	G	8: 4,353,913	Q119R	possibly damaging	Het
Cdh24	C	T	14: 54,633,215	D178N	probably damaging	Het
Cdk12	A	T	11: 98,222,687	T766S	unknown	Het
Chst15	T	A	7: 132,247,884	T443S	probably benign	Het
Cnbp	T	C	6: 87,845,146	D125G	possibly damaging	Het
Cntn2	A	T	1: 132,516,032	V1003E	possibly damaging	Het
Crct1	A	G	3: 93,014,825		probably benign	Het
Dand5	C	T	8: 84,816,484	C121Y	probably damaging	Het
Dmkn	A	T	7: 30,771,233	D382V	probably damaging	Het
Dnase2b	T	A	3: 146,593,441	T86S	probably damaging	Het
Dusp8	GCCACCACCACCACCACCACCACC	GCCACCACCACCACCACCACC	7: 142,082,154		probably benign	Het
Eef1akmt1	C	T	14: 57,550,632	V90M	probably damaging	Het
Egfl7	G	T	2: 26,590,980	W168L	probably benign	Het
Ep400	A	G	5: 110,665,810	C2908R	probably damaging	Het
Espl1	A	G	15: 102,315,241	K1076E	probably damaging	Het
Exoc4	A	G	6: 33,910,517	N747D	probably benign	Het
Fancm	T	C	12: 65,077,141	V191A	probably benign	Het
Fbxo17	A	G	7: 28,732,789	D97G	probably benign	Het
Fer1l6	G	T	15: 58,600,311		probably null	Het
Flt4	T	C	11: 49,627,143	W337R	probably damaging	Het
Fpr-rs7	T	C	17: 20,113,820	H136R	possibly damaging	Het
Frem3	T	A	8: 80,613,136	I686N	possibly damaging	Het
Galnt9	A	G	5: 110,577,449	K84R	probably damaging	Het
Gfm2	T	A	13: 97,175,676	M760K	probably damaging	Het
Glis3	T	C	19: 28,666,104	T13A	probably damaging	Het
Gm13078	A	T	4: 143,728,326	K398M	possibly damaging	Het
H2-K1	A	G	17: 33,997,076	V323A	possibly damaging	Het
Hbb-bs	G	A	7: 103,826,720	A130V	probably damaging	Het
Herc2	T	A	7: 56,229,690	H4685Q	probably benign	Het
Ighv5-9-1	C	T	12: 113,736,294	R56H	possibly damaging	Het
Itgb4	A	G	11: 116,006,605	N1548S	probably benign	Het
Itpr3	T	C	17: 27,098,005	Y745H	probably damaging	Het
Kank3	G	T	17: 33,817,200	G14V	probably damaging	Het
Kif24	G	T	4: 41,394,329	S982Y	probably damaging	Het
Kifc5b	C	T	17: 26,921,023	R53W	probably damaging	Het
Krt39	A	G	11: 99,514,749	S442P	possibly damaging	Het
Lcat	G	A	8: 105,942,442	P67L	possibly damaging	Het
Maml2	T	C	9: 13,621,175	S562P	probably damaging	Het
Map3k8	G	A	18: 4,349,124	R65W	possibly damaging	Het
Mbd3	G	T	10: 80,395,576	R12S	probably damaging	Het
Msr1	T	C	8: 39,624,251	E106G	possibly damaging	Het
Myh4	T	A	11: 67,254,028	L1256Q	probably damaging	Het
Mypn	G	A	10: 63,147,936	T511M	possibly damaging	Het
Nub1	A	T	5: 24,701,469	N331I	probably benign	Het
Nup107	A	G	10: 117,770,511	V440A	possibly damaging	Het
Ofcc1	A	G	13: 40,214,517	F174L	probably benign	Het
Olfr1497	T	C	19: 13,795,465	I49V	probably benign	Het
Olfr597	A	T	7: 103,320,543	N44I	probably damaging	Het
Olfr975	A	C	9: 39,950,225	V182G	probably damaging	Het
Parp2	C	A	14: 50,819,268	L310I	probably damaging	Het
Pcdh20	A	G	14: 88,469,726	V46A	probably benign	Het
Pcdhgb6	A	G	18: 37,743,472	D411G	probably damaging	Het
Pkd1l2	A	T	8: 117,072,549	N267K	probably damaging	Het
Pkd1l2	T	C	8: 117,054,885	E807G	probably benign	Het
Rell1	C	A	5: 63,936,033	M126I	probably damaging	Het
Robo4	G	A	9: 37,402,560	E36K	probably benign	Het
Rpgrip1l	T	C	8: 91,261,009	S807G	probably benign	Het
Rpl10a	T	C	17: 28,330,852	V169A	probably benign	Het
Rubcn	C	T	16: 32,847,294	V166I	probably damaging	Het
Sall2	T	C	14: 52,315,393	E113G	possibly damaging	Het
Sars2	T	C	7: 28,752,438	S423P	possibly damaging	Het
Scaper	A	G	9: 55,892,235	I182T	probably benign	Het
Selp	A	G	1: 164,141,397	D522G	possibly damaging	Het
Sema4b	T	A	7: 80,198,756	I35N	possibly damaging	Het
Sgce	A	T	6: 4,694,153	F268I	probably damaging	Het
Slc14a2	G	T	18: 78,192,188	A258E	probably damaging	Het
Slc17a9	T	C	2: 180,735,949	Y213H	probably benign	Het
Slc22a7	T	G	17: 46,436,933	I233L	probably benign	Het
Slc35f1	A	G	10: 53,062,602	Q210R	probably damaging	Het
Slc6a21	A	G	7: 45,288,310	E350G	possibly damaging	Het
Spata21	A	T	4: 141,112,091	D639V	probably damaging	Het
Svil	A	G	18: 5,108,631	D1519G	probably damaging	Het
Tbccd1	T	C	16: 22,841,899	T56A	probably benign	Het
Tigit	A	T	16: 43,662,017	I118N	probably damaging	Het
Tlr11	A	T	14: 50,362,885	Q776L	possibly damaging	Het
Tspan12	A	C	6: 21,835,449	I9S	possibly damaging	Het
Unc5c	T	A	3: 141,788,966	Y347N	probably damaging	Het
Unk	A	G	11: 116,054,945	T481A	probably benign	Het
Vmn1r192	A	C	13: 22,187,480	V190G	probably damaging	Het
Vnn3	A	T	10: 23,864,575	M259L	probably benign	Het
Zan	T	C	5: 137,408,370		probably benign	Het
Zdhhc6	T	C	19: 55,313,210	H113R	probably damaging	Het

Other mutations in Adam3

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00429:Adam3	APN	8	24,694,278 (GRCm38)	missense	probably damaging	1.00
IGL01792:Adam3	APN	8	24,697,203 (GRCm38)	missense	probably benign	0.27
IGL01894:Adam3	APN	8	24,687,938 (GRCm38)	missense	probably benign	0.33
IGL01941:Adam3	APN	8	24,681,446 (GRCm38)	utr 3 prime	probably benign
IGL02355:Adam3	APN	8	24,697,191 (GRCm38)	missense	probably damaging	1.00
IGL02362:Adam3	APN	8	24,697,191 (GRCm38)	missense	probably damaging	1.00
IGL02511:Adam3	APN	8	24,695,176 (GRCm38)	missense	probably damaging	0.98
IGL03070:Adam3	APN	8	24,703,784 (GRCm38)	missense	probably damaging	1.00
IGL03106:Adam3	APN	8	24,715,119 (GRCm38)	splice site	probably benign
IGL03238:Adam3	APN	8	24,687,965 (GRCm38)	splice site	probably null
I2288:Adam3	UTSW	8	24,684,661 (GRCm38)	missense	probably damaging	1.00
R0511:Adam3	UTSW	8	24,695,315 (GRCm38)	missense	probably damaging	1.00
R1103:Adam3	UTSW	8	24,714,271 (GRCm38)	splice site	probably benign
R1104:Adam3	UTSW	8	24,681,529 (GRCm38)	missense	probably benign	0.10
R1430:Adam3	UTSW	8	24,714,271 (GRCm38)	splice site	probably benign
R1599:Adam3	UTSW	8	24,725,361 (GRCm38)	missense	possibly damaging	0.50
R1663:Adam3	UTSW	8	24,687,933 (GRCm38)	missense	probably benign	0.03
R2023:Adam3	UTSW	8	24,689,463 (GRCm38)	missense	possibly damaging	0.93
R2278:Adam3	UTSW	8	24,711,384 (GRCm38)	missense	probably damaging	0.99
R3033:Adam3	UTSW	8	24,694,211 (GRCm38)	missense	probably benign	0.00
R3440:Adam3	UTSW	8	24,680,743 (GRCm38)	utr 3 prime	probably benign
R3441:Adam3	UTSW	8	24,680,743 (GRCm38)	utr 3 prime	probably benign
R3688:Adam3	UTSW	8	24,703,848 (GRCm38)	missense	probably benign	0.02
R4478:Adam3	UTSW	8	24,695,155 (GRCm38)	missense	probably benign	0.04
R4654:Adam3	UTSW	8	24,703,803 (GRCm38)	missense	probably damaging	1.00
R4811:Adam3	UTSW	8	24,711,724 (GRCm38)	missense	probably benign	0.10
R4910:Adam3	UTSW	8	24,694,305 (GRCm38)	missense	probably benign	0.03
R4941:Adam3	UTSW	8	24,677,316 (GRCm38)	unclassified	probably benign
R5239:Adam3	UTSW	8	24,694,191 (GRCm38)	missense	possibly damaging	0.62
R5771:Adam3	UTSW	8	24,707,411 (GRCm38)	missense	probably benign	0.00
R5897:Adam3	UTSW	8	24,697,228 (GRCm38)	missense	probably benign	0.00
R5916:Adam3	UTSW	8	24,684,539 (GRCm38)	critical splice donor site	probably null
R5979:Adam3	UTSW	8	24,677,367 (GRCm38)	missense	probably benign	0.03
R6168:Adam3	UTSW	8	24,681,614 (GRCm38)	splice site	probably null
R6189:Adam3	UTSW	8	24,711,336 (GRCm38)	missense	probably benign	0.01
R6801:Adam3	UTSW	8	24,684,664 (GRCm38)	missense	possibly damaging	0.61
R6997:Adam3	UTSW	8	24,681,523 (GRCm38)	missense	probably benign	0.10
R7065:Adam3	UTSW	8	24,711,675 (GRCm38)	critical splice donor site	probably null
R7074:Adam3	UTSW	8	24,694,347 (GRCm38)	missense	probably benign	0.01
R7151:Adam3	UTSW	8	24,695,255 (GRCm38)	missense	probably damaging	1.00
R7208:Adam3	UTSW	8	24,711,401 (GRCm38)	missense	probably damaging	0.98
R7341:Adam3	UTSW	8	24,687,980 (GRCm38)	missense	possibly damaging	0.60
R7528:Adam3	UTSW	8	24,677,263 (GRCm38)	missense	unknown
R7797:Adam3	UTSW	8	24,694,644 (GRCm38)	missense	probably damaging	1.00
R7891:Adam3	UTSW	8	24,707,497 (GRCm38)	critical splice acceptor site	probably null
R8064:Adam3	UTSW	8	24,681,550 (GRCm38)	missense	probably benign	0.10
R8157:Adam3	UTSW	8	24,707,437 (GRCm38)	missense	probably benign	0.27
R8229:Adam3	UTSW	8	24,711,738 (GRCm38)	missense	probably damaging	0.98
R9007:Adam3	UTSW	8	24,715,111 (GRCm38)	missense	probably benign	0.02
R9018:Adam3	UTSW	8	24,694,276 (GRCm38)	nonsense	probably null
R9098:Adam3	UTSW	8	24,689,468 (GRCm38)	missense	probably damaging	1.00
R9110:Adam3	UTSW	8	24,703,805 (GRCm38)	missense	probably benign	0.00
R9125:Adam3	UTSW	8	24,723,501 (GRCm38)	missense	probably damaging	1.00
R9211:Adam3	UTSW	8	24,687,894 (GRCm38)	missense	probably benign	0.08
R9267:Adam3	UTSW	8	24,681,589 (GRCm38)	missense	probably benign
R9331:Adam3	UTSW	8	24,687,935 (GRCm38)	missense	probably benign	0.01
R9432:Adam3	UTSW	8	24,703,912 (GRCm38)	missense	probably damaging	1.00
R9716:Adam3	UTSW	8	24,714,258 (GRCm38)	missense	possibly damaging	0.65
X0063:Adam3	UTSW	8	24,711,706 (GRCm38)	missense	probably damaging	0.96
Z1088:Adam3	UTSW	8	24,681,431 (GRCm38)	utr 3 prime	probably benign

Predicted Primers

PCR Primer
(F):5'- GCAGTTTGTCCAAGCAACCATC -3'
(R):5'- GAAACCGAGACGTCACTGTG -3'

Sequencing Primer
(F):5'- TTGTCCAAGCAACCATCCCTCC -3'
(R):5'- AACTAAGATCACTGCTCTGCTTCAG -3'

Posted On

2016-04-15