Mutagenetix > Incidental Mutation

Incidental Mutation 'R4911:Lama2'

379551

Institutional Source

Beutler Lab

Gene Symbol

Lama2

Ensembl Gene

ENSMUSG00000019899

Gene Name

laminin, alpha 2

Synonyms

mer, merosin

MMRRC Submission

042513-MU

Accession Numbers

Essential gene?

Possibly non essential (E-score: 0.320) question?

Stock #

R4911 (G1)

Quality Score

206

Status

Validated

Chromosome

Chromosomal Location

26857281-27493021 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

G to A at 27014923 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Threonine to Methionine at position 1595 (T1595M)

Ref Sequence

ENSEMBL: ENSMUSP00000090304 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000092639]

AlphaFold

no structure available at present

PDB Structure

LAMININ ALPHA 2 CHAIN LG4-5 DOMAIN PAIR [X-RAY DIFFRACTION]
LAMININ ALPHA 2 CHAIN LG4-5 DOMAIN PAIR, CA1 SITE MUTANT [X-RAY DIFFRACTION]
CRYSTAL STRUCTURE OF THE FIFTH LAMININ G-LIKE MODULE OF THE MOUSE LAMININ ALPHA2 CHAIN [X-RAY DIFFRACTION]
CRYSTAL STRUCTURE OF THE LG1-3 REGION OF THE LAMININ ALPHA2 CHAIN [X-RAY DIFFRACTION]

Predicted Effect

probably damaging
Transcript: ENSMUST00000092639
AA Change: T1595M

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000090304
Gene: ENSMUSG00000019899
AA Change: T1595M

Domain	Start	End	E-Value	Type
signal peptide	1	19	N/A	INTRINSIC
LamNT	29	281	5.35e-129	SMART
EGF_Lam	283	337	2.11e-4	SMART
EGF_Lam	340	407	1.59e-8	SMART
EGF_Lam	410	462	5.44e-7	SMART
EGF_Lam	465	511	9.05e-4	SMART
LamB	574	706	2.26e-44	SMART
Pfam:Laminin_EGF	715	745	2.8e-4	PFAM
EGF_Lam	753	800	4.03e-10	SMART
EGF_Lam	803	858	3.01e-9	SMART
EGF_Lam	861	911	1.35e-11	SMART
EGF_Lam	914	960	7.23e-12	SMART
EGF_Lam	963	1007	5.87e-12	SMART
EGF_Lam	1010	1053	1.28e-12	SMART
EGF_Lam	1056	1099	2.37e-7	SMART
EGF_Lam	1102	1159	3.22e-9	SMART
LamB	1225	1360	1.95e-57	SMART
EGF_like	1364	1413	8.13e-1	SMART
EGF_Lam	1416	1462	5.48e-12	SMART
EGF_Lam	1465	1520	1.27e-7	SMART
EGF_Lam	1523	1567	2.4e-8	SMART
Pfam:Laminin_I	1584	1849	2e-92	PFAM
Blast:MA	1881	2113	1e-112	BLAST
LamG	2162	2307	1.28e-25	SMART
LamG	2356	2500	2.2e-33	SMART
LamG	2542	2688	3.31e-28	SMART
low complexity region	2725	2741	N/A	INTRINSIC
LamG	2781	2914	2.25e-39	SMART
LamG	2956	3092	1.53e-32	SMART

Meta Mutation Damage Score

0.6467

Coding Region Coverage

1x: 99.0%
3x: 98.1%
10x: 95.5%
20x: 89.7%

Validation Efficiency

97% (149/153)

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] Laminin, an extracellular protein, is a major component of the basement membrane. It is thought to mediate the attachment, migration, and organization of cells into tissues during embryonic development by interacting with other extracellular matrix components. It is composed of three subunits, alpha, beta, and gamma, which are bound to each other by disulfide bonds into a cross-shaped molecule. This gene encodes the alpha 2 chain, which constitutes one of the subunits of laminin 2 (merosin) and laminin 4 (s-merosin). Mutations in this gene have been identified as the cause of congenital merosin-deficient muscular dystrophy. Two transcript variants encoding different proteins have been found for this gene. [provided by RefSeq, Jul 2008]
PHENOTYPE: Homozygotes for targeted and spontaneous mutations exhibit progressive growth retardation, ataxia, muscle atrophy and degeneration, infertility, and premature lethality. Muscle fiber degeneration is evident as early as the first week of life. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 132 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Aacs	A	G	5: 125,583,224 (GRCm39)	D260G	possibly damaging	Het
Aadacl4	T	A	4: 144,340,362 (GRCm39)	L29H	probably damaging	Het
Abca7	T	C	10: 79,848,022 (GRCm39)		probably null	Het
Adgre1	G	A	17: 57,754,832 (GRCm39)	M643I	possibly damaging	Het
Adgrl2	A	T	3: 148,596,099 (GRCm39)	M79K	probably damaging	Het
Ankrd55	T	A	13: 112,459,573 (GRCm39)		probably null	Het
Aopep	A	T	13: 63,318,753 (GRCm39)		probably null	Het
Arhgap21	A	G	2: 20,863,800 (GRCm39)	I1257T	probably damaging	Het
Arhgap26	T	A	18: 39,126,690 (GRCm39)		probably benign	Het
Arhgap39	A	G	15: 76,622,005 (GRCm39)	S199P	probably damaging	Het
Arhgef5	A	G	6: 43,249,762 (GRCm39)	D171G	probably benign	Het
Atp7a	T	C	X: 105,163,980 (GRCm39)	V1305A	probably damaging	Het
B3gnt3	T	A	8: 72,145,578 (GRCm39)	R263S	probably benign	Het
B9d1	A	C	11: 61,398,497 (GRCm39)	D59A	probably benign	Het
Bag2	A	T	1: 33,787,357 (GRCm39)	I55N	probably benign	Het
Bank1	T	C	3: 135,990,004 (GRCm39)	I29V	probably benign	Het
Bbs2	A	T	8: 94,815,743 (GRCm39)	D174E	probably damaging	Het
Bmp8b	T	C	4: 123,009,030 (GRCm39)	W203R	probably damaging	Het
Cacnb2	A	T	2: 14,986,151 (GRCm39)	E359D	possibly damaging	Het
Camp	T	A	9: 109,676,651 (GRCm39)		probably null	Het
Casp4	C	T	9: 5,328,580 (GRCm39)		probably benign	Het
Ccdc110	A	T	8: 46,395,944 (GRCm39)	T612S	probably benign	Het
Cd209b	T	A	8: 3,976,640 (GRCm39)		probably null	Het
Cemip	T	C	7: 83,632,461 (GRCm39)	D367G	probably damaging	Het
Cers5	T	A	15: 99,644,960 (GRCm39)	N131I	probably damaging	Het
Cfhr4	T	G	1: 139,702,301 (GRCm39)	D61A	probably damaging	Het
Chd5	T	G	4: 152,445,129 (GRCm39)	V370G	probably damaging	Het
Cipc	C	A	12: 86,999,531 (GRCm39)	Q20K	probably benign	Het
Cnr2	T	A	4: 135,644,512 (GRCm39)	F197I	possibly damaging	Het
Col7a1	G	A	9: 108,804,287 (GRCm39)	G2233S	unknown	Het
Dcdc2b	T	A	4: 129,505,060 (GRCm39)	I125F	possibly damaging	Het
Ddi2	A	G	4: 141,411,713 (GRCm39)	S400P	probably benign	Het
Ddx31	C	A	2: 28,794,696 (GRCm39)	T664K	probably benign	Het
Dhx30	C	A	9: 109,929,992 (GRCm39)	G35C	probably damaging	Het
Dmxl2	G	A	9: 54,318,937 (GRCm39)	T1576I	probably damaging	Het
Dnah1	T	C	14: 31,017,280 (GRCm39)	Y1510C	probably damaging	Het
Dnah2	C	T	11: 69,389,930 (GRCm39)		probably null	Het
Dock10	C	A	1: 80,583,953 (GRCm39)	G163C	probably damaging	Het
Edar	T	C	10: 58,457,146 (GRCm39)	N144S	probably benign	Het
Elavl2	T	A	4: 91,196,915 (GRCm39)	E54D	possibly damaging	Het
Enam	T	G	5: 88,650,173 (GRCm39)	S561A	probably benign	Het
Ercc5	C	A	1: 44,206,031 (GRCm39)	H315N	possibly damaging	Het
Esp31	A	G	17: 38,955,552 (GRCm39)	E65G	possibly damaging	Het
Faap100	T	C	11: 120,262,939 (GRCm39)	I806M	probably benign	Het
Fbxw21	T	C	9: 108,974,731 (GRCm39)	Y263C	probably damaging	Het
Fsip2	T	A	2: 82,811,837 (GRCm39)	S2719T	possibly damaging	Het
Fv1	T	C	4: 147,953,875 (GRCm39)	V147A	probably benign	Het
Gal	T	C	19: 3,461,590 (GRCm39)	E65G	probably benign	Het
Galnt2l	A	G	8: 123,807,343 (GRCm39)		probably benign	Het
Galnt6	T	C	15: 100,614,059 (GRCm39)	T81A	probably benign	Het
Gcc2	A	G	10: 58,106,261 (GRCm39)	E399G	probably damaging	Het
Gfi1b	A	T	2: 28,500,114 (GRCm39)	C306S	probably damaging	Het
Gm10654	T	A	8: 71,384,496 (GRCm39)		noncoding transcript	Het
Gm4953	T	A	1: 158,995,929 (GRCm39)		noncoding transcript	Het
Gorasp2	T	C	2: 70,518,683 (GRCm39)		probably benign	Het
Gse1	T	C	8: 121,295,205 (GRCm39)		probably benign	Het
H2-D1	A	G	17: 35,484,973 (GRCm39)	E278G	probably damaging	Het
Herc2	T	C	7: 55,877,640 (GRCm39)	L4569P	probably damaging	Het
Hgs	T	A	11: 120,368,028 (GRCm39)	S246T	probably damaging	Het
Hs2st1	T	C	3: 144,170,843 (GRCm39)	T110A	probably benign	Het
Hydin	A	G	8: 111,322,070 (GRCm39)	Y4574C	probably benign	Het
Ighv1-23	C	A	12: 114,728,372 (GRCm39)	V17F	possibly damaging	Het
Ighv8-14	A	T	12: 115,772,185 (GRCm39)		noncoding transcript	Het
Igsf21	C	T	4: 139,761,934 (GRCm39)	R248H	probably benign	Het
Il22b	T	C	10: 118,130,894 (GRCm39)	M1V	probably null	Het
Il23r	T	C	6: 67,400,545 (GRCm39)	N595S	probably benign	Het
Il5ra	G	T	6: 106,692,629 (GRCm39)	P372Q	probably damaging	Het
Inppl1	A	G	7: 101,481,516 (GRCm39)	V222A	possibly damaging	Het
Ints10	T	C	8: 69,279,964 (GRCm39)	V697A	probably damaging	Het
Isg15	T	A	4: 156,284,217 (GRCm39)	T104S	probably benign	Het
Kif11	A	G	19: 37,406,385 (GRCm39)	T983A	probably benign	Het
Kif3b	A	T	2: 153,159,212 (GRCm39)	K338*	probably null	Het
Kpna2	T	A	11: 106,881,545 (GRCm39)	I362F	probably damaging	Het
Lrrc36	A	G	8: 106,153,567 (GRCm39)	T126A	probably benign	Het
Lrrk1	T	A	7: 65,945,202 (GRCm39)	D604V	probably damaging	Het
Map7d1	T	C	4: 126,130,484 (GRCm39)	K409E	probably damaging	Het
Mast2	T	C	4: 116,210,254 (GRCm39)	T110A	probably benign	Het
Micall2	G	A	5: 139,702,580 (GRCm39)	T221M	probably damaging	Het
Morc2b	T	A	17: 33,356,351 (GRCm39)	N474Y	probably damaging	Het
Myo1e	T	A	9: 70,250,378 (GRCm39)	M528K	probably benign	Het
Nlrp1c-ps	G	T	11: 71,151,195 (GRCm39)		noncoding transcript	Het
Nostrin	T	C	2: 68,991,486 (GRCm39)	S160P	possibly damaging	Het
Nup133	T	C	8: 124,653,870 (GRCm39)	R530G	possibly damaging	Het
Or2f2	T	A	6: 42,767,138 (GRCm39)	L55H	probably damaging	Het
Or5p64	T	C	7: 107,855,244 (GRCm39)	I34V	possibly damaging	Het
Or8c16	A	G	9: 38,130,392 (GRCm39)	E91G	probably damaging	Het
Pabpc4l	A	T	3: 46,400,597 (GRCm39)	M349K	possibly damaging	Het
Pah	G	A	10: 87,406,129 (GRCm39)	G256S	probably benign	Het
Pigk	T	C	3: 152,445,841 (GRCm39)	S151P	probably damaging	Het
Plcd4	A	C	1: 74,603,572 (GRCm39)	T658P	possibly damaging	Het
Pld4	A	T	12: 112,730,951 (GRCm39)	S178C	probably benign	Het
Polr1a	G	A	6: 71,886,213 (GRCm39)	E23K	possibly damaging	Het
Pomt1	T	C	2: 32,131,691 (GRCm39)	S127P	probably damaging	Het
Pon2	A	G	6: 5,269,029 (GRCm39)	V215A	possibly damaging	Het
Ppp3cb	A	T	14: 20,559,508 (GRCm39)	M416K	probably damaging	Het
Prdm1	A	T	10: 44,318,048 (GRCm39)	N273K	possibly damaging	Het
Prg4	T	A	1: 150,331,574 (GRCm39)		probably benign	Het
Prkn	G	T	17: 11,059,359 (GRCm39)		probably benign	Het
Ptch1	G	A	13: 63,670,866 (GRCm39)	T888M	probably damaging	Het
Pusl1	T	G	4: 155,975,899 (GRCm39)		probably benign	Het
Rapgef6	A	T	11: 54,513,143 (GRCm39)	E122D	probably damaging	Het
Rif1	C	T	2: 52,000,530 (GRCm39)	T1328I	probably damaging	Het
Rngtt	T	G	4: 33,500,292 (GRCm39)		probably null	Het
Runx2	G	A	17: 45,125,079 (GRCm39)	P80L	probably damaging	Het
Samd1	A	G	8: 84,725,618 (GRCm39)		probably benign	Het
Scamp5	A	T	9: 57,358,735 (GRCm39)	F14I	probably damaging	Het
Shank3	C	T	15: 89,388,547 (GRCm39)	R380C	probably damaging	Het
Shisal2a	T	C	4: 108,234,658 (GRCm39)	T70A	probably benign	Het
Slc1a4	C	A	11: 20,282,166 (GRCm39)	A103S	probably damaging	Het
Slc39a14	A	G	14: 70,547,371 (GRCm39)	V325A	probably benign	Het
Slc5a9	C	A	4: 111,748,941 (GRCm39)		probably null	Het
Spata6l	G	A	19: 28,874,903 (GRCm39)		probably benign	Het
Spta1	T	A	1: 174,013,213 (GRCm39)	S375T	probably damaging	Het
Sval1	A	G	6: 41,932,378 (GRCm39)	N76S	probably benign	Het
Synpo	C	T	18: 60,762,936 (GRCm39)		probably benign	Het
Sytl5	C	T	X: 9,781,841 (GRCm39)	P181L	possibly damaging	Het
Tacc1	A	G	8: 25,672,622 (GRCm39)	M111T	possibly damaging	Het
Tec	T	C	5: 72,913,694 (GRCm39)	D613G	probably benign	Het
Tecpr2	C	T	12: 110,897,921 (GRCm39)	T391I	possibly damaging	Het
Thop1	G	A	10: 80,909,125 (GRCm39)	G52D	probably damaging	Het
Tmco5	T	A	2: 116,722,689 (GRCm39)	V270D	possibly damaging	Het
Ttn	C	T	2: 76,556,973 (GRCm39)	E28265K	possibly damaging	Het
Tuft1	T	C	3: 94,542,750 (GRCm39)	D72G	probably damaging	Het
Tyrp1	C	T	4: 80,769,144 (GRCm39)		probably benign	Het
Usp9y	T	C	Y: 1,308,041 (GRCm39)	D2265G	probably damaging	Het
Vmn2r104	G	A	17: 20,250,288 (GRCm39)	A661V	probably benign	Het
Vwa5a	A	T	9: 38,649,268 (GRCm39)	N672I	probably benign	Het
Wdr95	A	T	5: 149,535,157 (GRCm39)	K772*	probably null	Het
Ybx1	T	C	4: 119,140,010 (GRCm39)	T106A	probably benign	Het
Ypel3	T	C	7: 126,376,961 (GRCm39)	S14P	probably benign	Het
Zfp518a	T	A	19: 40,903,972 (GRCm39)	S1300R	probably benign	Het
Zscan5b	A	T	7: 6,242,189 (GRCm39)	*469Y	probably null	Het

Other mutations in Lama2

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00392:Lama2	APN	10	27,064,261 (GRCm39)	missense	probably benign	0.01
IGL00467:Lama2	APN	10	27,343,193 (GRCm39)	splice site	probably benign
IGL00470:Lama2	APN	10	27,119,738 (GRCm39)	missense	probably benign	0.22
IGL00517:Lama2	APN	10	27,073,326 (GRCm39)	missense	probably benign	0.01
IGL00541:Lama2	APN	10	27,064,302 (GRCm39)	missense	probably benign	0.14
IGL00931:Lama2	APN	10	26,882,772 (GRCm39)	missense	possibly damaging	0.92
IGL00951:Lama2	APN	10	26,906,281 (GRCm39)	missense	probably benign	0.03
IGL00988:Lama2	APN	10	27,245,011 (GRCm39)	nonsense	probably null
IGL01098:Lama2	APN	10	26,907,108 (GRCm39)	missense	possibly damaging	0.66
IGL01152:Lama2	APN	10	27,084,425 (GRCm39)	missense	probably benign	0.00
IGL01293:Lama2	APN	10	27,107,632 (GRCm39)	missense	probably benign	0.38
IGL01338:Lama2	APN	10	27,064,268 (GRCm39)	missense	probably benign	0.13
IGL01609:Lama2	APN	10	27,220,417 (GRCm39)	missense	probably benign	0.03
IGL01643:Lama2	APN	10	26,946,368 (GRCm39)	splice site	probably benign
IGL01675:Lama2	APN	10	27,064,050 (GRCm39)	missense	possibly damaging	0.77
IGL01681:Lama2	APN	10	27,141,041 (GRCm39)	missense	probably benign	0.33
IGL01694:Lama2	APN	10	26,882,738 (GRCm39)	missense	possibly damaging	0.75
IGL01705:Lama2	APN	10	27,065,270 (GRCm39)	splice site	probably benign
IGL01885:Lama2	APN	10	26,981,135 (GRCm39)	nonsense	probably null
IGL01935:Lama2	APN	10	27,298,600 (GRCm39)	missense	probably damaging	0.98
IGL01994:Lama2	APN	10	27,343,199 (GRCm39)	critical splice donor site	probably null
IGL02041:Lama2	APN	10	26,860,322 (GRCm39)	missense	probably damaging	1.00
IGL02067:Lama2	APN	10	27,052,792 (GRCm39)	missense	probably benign	0.02
IGL02097:Lama2	APN	10	27,014,956 (GRCm39)	missense	probably benign	0.09
IGL02179:Lama2	APN	10	26,946,360 (GRCm39)	missense	probably benign	0.01
IGL02268:Lama2	APN	10	26,877,112 (GRCm39)	splice site	probably benign
IGL02302:Lama2	APN	10	27,088,039 (GRCm39)	missense	probably benign	0.06
IGL02363:Lama2	APN	10	27,242,062 (GRCm39)	missense	probably damaging	1.00
IGL02378:Lama2	APN	10	26,919,652 (GRCm39)	missense	probably damaging	0.99
IGL02642:Lama2	APN	10	27,343,269 (GRCm39)	missense	probably damaging	1.00
IGL02676:Lama2	APN	10	26,994,489 (GRCm39)	missense	probably benign	0.00
IGL02695:Lama2	APN	10	26,876,771 (GRCm39)	missense	probably benign
IGL02735:Lama2	APN	10	26,980,124 (GRCm39)	missense	probably damaging	1.00
IGL02794:Lama2	APN	10	26,917,227 (GRCm39)	missense	possibly damaging	0.73
IGL02823:Lama2	APN	10	26,877,141 (GRCm39)	missense	probably damaging	1.00
IGL02869:Lama2	APN	10	26,891,534 (GRCm39)	missense	probably damaging	0.99
IGL02942:Lama2	APN	10	26,917,216 (GRCm39)	missense	probably damaging	1.00
IGL03201:Lama2	APN	10	27,220,566 (GRCm39)	nonsense	probably null
IGL03268:Lama2	APN	10	27,298,649 (GRCm39)	missense	probably damaging	1.00
IGL03288:Lama2	APN	10	27,245,047 (GRCm39)	missense	probably damaging	1.00
IGL03380:Lama2	APN	10	26,926,261 (GRCm39)	missense	probably damaging	1.00
IGL03407:Lama2	APN	10	27,223,017 (GRCm39)	missense	probably damaging	1.00
cowboy	UTSW	10	26,919,639 (GRCm39)	frame shift	probably null
petri	UTSW	10	26,869,394 (GRCm39)	splice site	probably null
PIT4362001:Lama2	UTSW	10	27,245,132 (GRCm39)	missense	probably damaging	1.00
PIT4382001:Lama2	UTSW	10	27,080,901 (GRCm39)	missense	probably damaging	1.00
PIT4431001:Lama2	UTSW	10	26,977,426 (GRCm39)	missense	probably damaging	1.00
R0038:Lama2	UTSW	10	26,862,793 (GRCm39)	missense	probably benign	0.02
R0038:Lama2	UTSW	10	26,862,793 (GRCm39)	missense	probably benign	0.02
R0114:Lama2	UTSW	10	26,869,064 (GRCm39)	nonsense	probably null
R0142:Lama2	UTSW	10	27,063,841 (GRCm39)	missense	probably benign
R0313:Lama2	UTSW	10	26,869,394 (GRCm39)	splice site	probably null
R0376:Lama2	UTSW	10	26,891,542 (GRCm39)	missense	possibly damaging	0.68
R0412:Lama2	UTSW	10	27,066,621 (GRCm39)	missense	possibly damaging	0.58
R0472:Lama2	UTSW	10	26,866,863 (GRCm39)	missense	probably damaging	1.00
R0607:Lama2	UTSW	10	27,065,127 (GRCm39)	missense	probably benign	0.34
R0648:Lama2	UTSW	10	26,865,372 (GRCm39)	missense	probably benign	0.00
R0667:Lama2	UTSW	10	27,220,406 (GRCm39)	splice site	probably null
R0760:Lama2	UTSW	10	26,920,429 (GRCm39)	critical splice donor site	probably null
R1240:Lama2	UTSW	10	26,917,120 (GRCm39)	missense	probably damaging	1.00
R1385:Lama2	UTSW	10	27,100,039 (GRCm39)	missense	probably benign	0.11
R1433:Lama2	UTSW	10	27,063,750 (GRCm39)	missense	probably damaging	1.00
R1434:Lama2	UTSW	10	27,084,366 (GRCm39)	missense	probably damaging	1.00
R1574:Lama2	UTSW	10	27,200,750 (GRCm39)	missense	possibly damaging	0.65
R1574:Lama2	UTSW	10	27,200,750 (GRCm39)	missense	possibly damaging	0.65
R1645:Lama2	UTSW	10	27,244,981 (GRCm39)	missense	probably damaging	1.00
R1702:Lama2	UTSW	10	27,066,525 (GRCm39)	missense	probably benign
R1703:Lama2	UTSW	10	27,142,667 (GRCm39)	missense	probably damaging	1.00
R1769:Lama2	UTSW	10	27,084,403 (GRCm39)	missense	probably benign
R1769:Lama2	UTSW	10	27,084,402 (GRCm39)	missense	probably damaging	1.00
R1846:Lama2	UTSW	10	27,088,092 (GRCm39)	missense	probably damaging	1.00
R1859:Lama2	UTSW	10	26,907,078 (GRCm39)	missense	possibly damaging	0.51
R1871:Lama2	UTSW	10	26,860,490 (GRCm39)	missense	probably damaging	1.00
R1903:Lama2	UTSW	10	27,064,395 (GRCm39)	missense	probably damaging	1.00
R1906:Lama2	UTSW	10	26,932,523 (GRCm39)	critical splice donor site	probably null
R1958:Lama2	UTSW	10	26,857,594 (GRCm39)	missense	probably damaging	0.97
R1959:Lama2	UTSW	10	27,298,614 (GRCm39)	missense	probably damaging	1.00
R1977:Lama2	UTSW	10	26,866,796 (GRCm39)	splice site	probably null
R2063:Lama2	UTSW	10	27,040,922 (GRCm39)	missense	probably damaging	1.00
R2079:Lama2	UTSW	10	27,245,049 (GRCm39)	missense	probably damaging	0.99
R2085:Lama2	UTSW	10	27,080,837 (GRCm39)	nonsense	probably null
R2125:Lama2	UTSW	10	26,920,449 (GRCm39)	nonsense	probably null
R2140:Lama2	UTSW	10	26,930,690 (GRCm39)	splice site	probably null
R2219:Lama2	UTSW	10	26,919,565 (GRCm39)	missense	probably damaging	0.99
R2259:Lama2	UTSW	10	26,907,123 (GRCm39)	missense	probably benign	0.00
R2265:Lama2	UTSW	10	26,868,932 (GRCm39)	missense	probably damaging	1.00
R2266:Lama2	UTSW	10	26,862,793 (GRCm39)	missense	probably benign	0.02
R2267:Lama2	UTSW	10	26,868,932 (GRCm39)	missense	probably damaging	1.00
R2268:Lama2	UTSW	10	26,868,932 (GRCm39)	missense	probably damaging	1.00
R2269:Lama2	UTSW	10	26,868,932 (GRCm39)	missense	probably damaging	1.00
R2862:Lama2	UTSW	10	27,298,608 (GRCm39)	nonsense	probably null
R2912:Lama2	UTSW	10	26,876,799 (GRCm39)	missense	probably benign
R2999:Lama2	UTSW	10	26,865,417 (GRCm39)	missense	probably benign	0.18
R3034:Lama2	UTSW	10	26,877,231 (GRCm39)	missense	probably benign	0.11
R3081:Lama2	UTSW	10	26,877,231 (GRCm39)	missense	probably benign	0.11
R3107:Lama2	UTSW	10	26,877,231 (GRCm39)	missense	probably benign	0.11
R3109:Lama2	UTSW	10	26,877,231 (GRCm39)	missense	probably benign	0.11
R3436:Lama2	UTSW	10	26,877,231 (GRCm39)	missense	probably benign	0.11
R3437:Lama2	UTSW	10	26,877,231 (GRCm39)	missense	probably benign	0.11
R3706:Lama2	UTSW	10	27,014,992 (GRCm39)	missense	probably damaging	1.00
R3780:Lama2	UTSW	10	27,335,335 (GRCm39)	missense	probably damaging	1.00
R3807:Lama2	UTSW	10	27,066,661 (GRCm39)	frame shift	probably null
R3919:Lama2	UTSW	10	26,994,501 (GRCm39)	missense	probably damaging	1.00
R4014:Lama2	UTSW	10	26,860,372 (GRCm39)	missense	probably damaging	1.00
R4131:Lama2	UTSW	10	26,917,170 (GRCm39)	missense	probably benign	0.00
R4190:Lama2	UTSW	10	27,142,660 (GRCm39)	missense	probably damaging	0.96
R4273:Lama2	UTSW	10	27,223,050 (GRCm39)	missense	probably damaging	1.00
R4358:Lama2	UTSW	10	26,860,489 (GRCm39)	missense	probably damaging	1.00
R4407:Lama2	UTSW	10	27,088,124 (GRCm39)	small deletion	probably benign
R4415:Lama2	UTSW	10	26,865,340 (GRCm39)	nonsense	probably null
R4426:Lama2	UTSW	10	27,298,554 (GRCm39)	missense	probably damaging	1.00
R4590:Lama2	UTSW	10	26,865,410 (GRCm39)	missense	probably benign	0.00
R4615:Lama2	UTSW	10	26,857,520 (GRCm39)	missense	probably damaging	0.99
R4736:Lama2	UTSW	10	27,080,925 (GRCm39)	missense	probably damaging	1.00
R4754:Lama2	UTSW	10	26,994,527 (GRCm39)	missense	possibly damaging	0.58
R4791:Lama2	UTSW	10	27,343,267 (GRCm39)	missense	probably damaging	1.00
R4834:Lama2	UTSW	10	26,882,745 (GRCm39)	missense	probably benign	0.30
R4856:Lama2	UTSW	10	26,919,639 (GRCm39)	frame shift	probably null
R4858:Lama2	UTSW	10	26,919,639 (GRCm39)	frame shift	probably null
R4859:Lama2	UTSW	10	26,919,639 (GRCm39)	frame shift	probably null
R4897:Lama2	UTSW	10	26,919,639 (GRCm39)	frame shift	probably null
R4898:Lama2	UTSW	10	26,919,639 (GRCm39)	frame shift	probably null
R4899:Lama2	UTSW	10	26,919,639 (GRCm39)	frame shift	probably null
R4907:Lama2	UTSW	10	27,040,942 (GRCm39)	missense	probably benign	0.11
R4924:Lama2	UTSW	10	27,245,137 (GRCm39)	missense	probably damaging	0.98
R5023:Lama2	UTSW	10	27,066,500 (GRCm39)	missense	probably damaging	0.97
R5057:Lama2	UTSW	10	27,040,982 (GRCm39)	missense	probably damaging	1.00
R5070:Lama2	UTSW	10	27,226,247 (GRCm39)	critical splice donor site	probably null
R5116:Lama2	UTSW	10	26,994,556 (GRCm39)	missense	probably benign	0.08
R5177:Lama2	UTSW	10	27,066,699 (GRCm39)	missense	possibly damaging	0.94
R5198:Lama2	UTSW	10	27,222,999 (GRCm39)	missense	probably damaging	0.96
R5289:Lama2	UTSW	10	27,088,069 (GRCm39)	nonsense	probably null
R5327:Lama2	UTSW	10	27,014,942 (GRCm39)	missense	probably benign
R5424:Lama2	UTSW	10	26,860,392 (GRCm39)	missense	probably damaging	1.00
R5469:Lama2	UTSW	10	26,917,185 (GRCm39)	missense	possibly damaging	0.92
R5620:Lama2	UTSW	10	26,866,876 (GRCm39)	missense	probably damaging	0.99
R5667:Lama2	UTSW	10	27,066,540 (GRCm39)	missense	probably damaging	1.00
R5671:Lama2	UTSW	10	27,066,540 (GRCm39)	missense	probably damaging	1.00
R5815:Lama2	UTSW	10	26,862,847 (GRCm39)	missense	probably damaging	1.00
R5917:Lama2	UTSW	10	27,066,693 (GRCm39)	missense	probably damaging	1.00
R5935:Lama2	UTSW	10	26,891,494 (GRCm39)	missense	probably benign
R5976:Lama2	UTSW	10	27,066,672 (GRCm39)	missense	probably benign	0.00
R5979:Lama2	UTSW	10	27,111,728 (GRCm39)	missense	probably damaging	0.99
R6004:Lama2	UTSW	10	27,111,781 (GRCm39)	missense	probably benign	0.01
R6180:Lama2	UTSW	10	26,857,495 (GRCm39)	missense	probably benign	0.03
R6198:Lama2	UTSW	10	27,064,018 (GRCm39)	missense	probably damaging	1.00
R6257:Lama2	UTSW	10	26,862,895 (GRCm39)	missense	possibly damaging	0.85
R6271:Lama2	UTSW	10	26,899,325 (GRCm39)	missense	possibly damaging	0.67
R6322:Lama2	UTSW	10	27,066,543 (GRCm39)	missense	probably damaging	0.96
R6354:Lama2	UTSW	10	27,088,064 (GRCm39)	missense	probably damaging	1.00
R6431:Lama2	UTSW	10	26,929,027 (GRCm39)	missense	possibly damaging	0.50
R6499:Lama2	UTSW	10	26,907,154 (GRCm39)	missense	probably damaging	1.00
R6535:Lama2	UTSW	10	26,980,127 (GRCm39)	missense	probably damaging	1.00
R6545:Lama2	UTSW	10	27,052,793 (GRCm39)	missense	probably benign
R6636:Lama2	UTSW	10	27,000,564 (GRCm39)	missense	probably benign	0.13
R6891:Lama2	UTSW	10	27,204,078 (GRCm39)	nonsense	probably null
R6891:Lama2	UTSW	10	27,204,068 (GRCm39)	nonsense	probably null
R6902:Lama2	UTSW	10	26,857,625 (GRCm39)	missense	probably damaging	1.00
R6908:Lama2	UTSW	10	26,907,192 (GRCm39)	splice site	probably null
R7168:Lama2	UTSW	10	27,242,148 (GRCm39)	critical splice acceptor site	probably null
R7233:Lama2	UTSW	10	27,107,659 (GRCm39)	missense	probably damaging	1.00
R7272:Lama2	UTSW	10	27,000,552 (GRCm39)	missense	probably damaging	1.00
R7274:Lama2	UTSW	10	26,995,976 (GRCm39)	missense	probably damaging	0.99
R7419:Lama2	UTSW	10	27,142,630 (GRCm39)	missense	probably benign
R7423:Lama2	UTSW	10	27,088,222 (GRCm39)	missense	probably benign	0.00
R7554:Lama2	UTSW	10	27,031,492 (GRCm39)	missense	probably damaging	1.00
R7569:Lama2	UTSW	10	27,141,046 (GRCm39)	missense	probably damaging	1.00
R7574:Lama2	UTSW	10	26,882,726 (GRCm39)	missense	probably benign	0.03
R7584:Lama2	UTSW	10	26,980,257 (GRCm39)	missense	possibly damaging	0.78
R7586:Lama2	UTSW	10	26,977,389 (GRCm39)	missense	probably benign	0.00
R7603:Lama2	UTSW	10	27,142,676 (GRCm39)	missense	possibly damaging	0.55
R7691:Lama2	UTSW	10	27,084,389 (GRCm39)	missense	possibly damaging	0.67
R7750:Lama2	UTSW	10	26,866,920 (GRCm39)	missense	probably damaging	0.97
R7841:Lama2	UTSW	10	27,031,529 (GRCm39)	missense	probably benign	0.00
R7864:Lama2	UTSW	10	26,932,611 (GRCm39)	missense	probably benign	0.08
R7960:Lama2	UTSW	10	26,869,094 (GRCm39)	missense	probably benign	0.04
R7964:Lama2	UTSW	10	27,099,977 (GRCm39)	critical splice donor site	probably null
R7980:Lama2	UTSW	10	27,239,609 (GRCm39)	missense	probably damaging	0.98
R8013:Lama2	UTSW	10	27,220,494 (GRCm39)	missense	probably benign	0.00
R8028:Lama2	UTSW	10	27,204,145 (GRCm39)	missense	probably benign	0.13
R8097:Lama2	UTSW	10	27,066,660 (GRCm39)	nonsense	probably null
R8100:Lama2	UTSW	10	26,917,113 (GRCm39)	missense	probably benign	0.03
R8110:Lama2	UTSW	10	26,866,866 (GRCm39)	missense	probably damaging	1.00
R8122:Lama2	UTSW	10	26,930,592 (GRCm39)	missense	possibly damaging	0.87
R8264:Lama2	UTSW	10	27,343,218 (GRCm39)	missense	probably benign	0.07
R8315:Lama2	UTSW	10	27,298,655 (GRCm39)	missense	probably damaging	1.00
R8318:Lama2	UTSW	10	26,860,334 (GRCm39)	missense	probably damaging	1.00
R8419:Lama2	UTSW	10	27,298,559 (GRCm39)	missense	probably benign	0.26
R8475:Lama2	UTSW	10	26,977,369 (GRCm39)	missense	possibly damaging	0.69
R8735:Lama2	UTSW	10	27,066,530 (GRCm39)	missense	probably damaging	1.00
R8754:Lama2	UTSW	10	26,877,147 (GRCm39)	missense	possibly damaging	0.83
R8817:Lama2	UTSW	10	27,063,869 (GRCm39)	missense	probably damaging	1.00
R8851:Lama2	UTSW	10	27,242,119 (GRCm39)	missense	possibly damaging	0.94
R8859:Lama2	UTSW	10	27,335,384 (GRCm39)	missense	possibly damaging	0.58
R8886:Lama2	UTSW	10	27,245,157 (GRCm39)	splice site	probably benign
R8937:Lama2	UTSW	10	26,862,816 (GRCm39)	missense	probably damaging	1.00
R8993:Lama2	UTSW	10	27,298,710 (GRCm39)	missense	possibly damaging	0.91
R9025:Lama2	UTSW	10	26,860,367 (GRCm39)	missense	probably benign	0.00
R9027:Lama2	UTSW	10	27,080,881 (GRCm39)	missense	probably damaging	1.00
R9047:Lama2	UTSW	10	26,882,697 (GRCm39)	missense	possibly damaging	0.50
R9075:Lama2	UTSW	10	26,857,588 (GRCm39)	missense	probably damaging	1.00
R9135:Lama2	UTSW	10	27,298,515 (GRCm39)	missense	probably damaging	1.00
R9165:Lama2	UTSW	10	26,929,022 (GRCm39)	critical splice donor site	probably null
R9192:Lama2	UTSW	10	27,204,181 (GRCm39)	missense	possibly damaging	0.95
R9254:Lama2	UTSW	10	27,298,685 (GRCm39)	missense	probably damaging	0.96
R9326:Lama2	UTSW	10	26,906,193 (GRCm39)	missense	probably benign	0.04
R9356:Lama2	UTSW	10	27,088,186 (GRCm39)	missense	probably damaging	0.99
R9358:Lama2	UTSW	10	27,492,761 (GRCm39)	missense	unknown
R9358:Lama2	UTSW	10	27,064,378 (GRCm39)	missense	possibly damaging	0.95
R9376:Lama2	UTSW	10	26,994,620 (GRCm39)	missense	probably benign	0.11
R9381:Lama2	UTSW	10	27,064,023 (GRCm39)	nonsense	probably null
R9397:Lama2	UTSW	10	26,981,117 (GRCm39)	missense	probably benign	0.01
R9460:Lama2	UTSW	10	27,298,475 (GRCm39)	missense	probably damaging	1.00
R9478:Lama2	UTSW	10	26,891,478 (GRCm39)	missense	probably damaging	0.98
R9503:Lama2	UTSW	10	26,865,440 (GRCm39)	missense	possibly damaging	0.57
R9514:Lama2	UTSW	10	27,100,015 (GRCm39)	missense	probably benign	0.00
R9515:Lama2	UTSW	10	26,877,170 (GRCm39)	missense	probably benign	0.23
R9516:Lama2	UTSW	10	27,100,015 (GRCm39)	missense	probably benign	0.00
R9533:Lama2	UTSW	10	26,862,871 (GRCm39)	missense	probably damaging	1.00
R9619:Lama2	UTSW	10	27,064,282 (GRCm39)	missense	probably damaging	1.00
R9721:Lama2	UTSW	10	27,343,338 (GRCm39)	missense	possibly damaging	0.58

Predicted Primers

PCR Primer
(F):5'- CAGTTCTCTGGTTTGAAACACC -3'
(R):5'- AGATGCTGCATCTCATCATCATTC -3'

Sequencing Primer
(F):5'- CTCTGGTTTGAAACACCAATTTAGG -3'
(R):5'- ATCATTCATAGAATTATGCTCAGACC -3'

Posted On

2016-04-15