Mutagenetix > Incidental Mutation

Incidental Mutation 'R4937:Dnm2'

380481

Institutional Source

Beutler Lab

Gene Symbol

Dnm2

Ensembl Gene

ENSMUSG00000033335

Gene Name

dynamin 2

Synonyms

b2b2159Clo, Dyn2

Accession Numbers

Essential gene?

Essential (E-score: 1.000) question?

Stock #

R4937 (G1)

Quality Score

171

Status

Not validated

Chromosome

Chromosomal Location

21336204-21419055 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

G to A at 21392633 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Serine to Asparagine at position 447 (S447N)

Ref Sequence

ENSEMBL: ENSMUSP00000133564 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000072362] [ENSMUST00000091087] [ENSMUST00000115404] [ENSMUST00000165766] [ENSMUST00000172482] [ENSMUST00000173397]

AlphaFold

P39054

Predicted Effect

probably benign
Transcript: ENSMUST00000072362
AA Change: S447N

PolyPhen 2 Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)

SMART Domains

Protein: ENSMUSP00000072199
Gene: ENSMUSG00000033335
AA Change: S447N

Domain	Start	End	E-Value	Type
DYNc	6	245	1.01e-193	SMART
low complexity region	298	313	N/A	INTRINSIC
PH	520	627	8e-13	SMART
GED	648	739	2.57e-28	SMART
low complexity region	740	752	N/A	INTRINSIC
low complexity region	777	799	N/A	INTRINSIC
low complexity region	831	864	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000091087
AA Change: S447N

PolyPhen 2 Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)

SMART Domains

Protein: ENSMUSP00000088616
Gene: ENSMUSG00000033335
AA Change: S447N

Domain	Start	End	E-Value	Type
DYNc	6	245	1.01e-193	SMART
low complexity region	298	313	N/A	INTRINSIC
PH	516	623	8e-13	SMART
GED	644	735	2.57e-28	SMART
low complexity region	736	748	N/A	INTRINSIC
low complexity region	773	795	N/A	INTRINSIC
low complexity region	827	860	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000115404
AA Change: S447N

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)

SMART Domains

Protein: ENSMUSP00000111063
Gene: ENSMUSG00000033335
AA Change: S447N

Domain	Start	End	E-Value	Type
DYNc	6	245	1.01e-193	SMART
low complexity region	298	313	N/A	INTRINSIC
PH	520	627	8e-13	SMART
GED	648	739	2.57e-28	SMART
low complexity region	740	752	N/A	INTRINSIC
low complexity region	777	799	N/A	INTRINSIC
low complexity region	831	864	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000165766
AA Change: S447N

PolyPhen 2 Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)

SMART Domains

Protein: ENSMUSP00000128961
Gene: ENSMUSG00000033335
AA Change: S447N

Domain	Start	End	E-Value	Type
DYNc	6	245	1.01e-193	SMART
low complexity region	298	313	N/A	INTRINSIC
PH	520	627	8e-13	SMART
GED	648	739	2.57e-28	SMART
low complexity region	740	752	N/A	INTRINSIC
low complexity region	777	799	N/A	INTRINSIC
low complexity region	831	858	N/A	INTRINSIC

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000169194

Predicted Effect

probably benign
Transcript: ENSMUST00000172482
AA Change: S447N

PolyPhen 2 Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)

SMART Domains

Protein: ENSMUSP00000133564
Gene: ENSMUSG00000033335
AA Change: S447N

Domain	Start	End	E-Value	Type
DYNc	6	245	1.01e-193	SMART
low complexity region	298	313	N/A	INTRINSIC
PH	520	627	8e-13	SMART
GED	648	739	2.57e-28	SMART
low complexity region	740	752	N/A	INTRINSIC
low complexity region	777	799	N/A	INTRINSIC
low complexity region	831	864	N/A	INTRINSIC

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000172763

Predicted Effect

probably benign
Transcript: ENSMUST00000173397
AA Change: S447N

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)

SMART Domains

Protein: ENSMUSP00000134243
Gene: ENSMUSG00000033335
AA Change: S447N

Domain	Start	End	E-Value	Type
DYNc	6	245	1.01e-193	SMART
low complexity region	298	313	N/A	INTRINSIC
PH	520	627	8e-13	SMART
GED	648	739	2.57e-28	SMART
low complexity region	740	752	N/A	INTRINSIC
low complexity region	777	799	N/A	INTRINSIC
low complexity region	831	863	N/A	INTRINSIC

Predicted Effect

unknown
Transcript: ENSMUST00000172833
AA Change: S109N

SMART Domains

Protein: ENSMUSP00000133858
Gene: ENSMUSG00000033335
AA Change: S109N

Domain	Start	End	E-Value	Type
Pfam:Dynamin_M	1	163	2.4e-55	PFAM
Pfam:PH	193	248	2.6e-7	PFAM

Predicted Effect

unknown
Transcript: ENSMUST00000174050
AA Change: S397N

SMART Domains

Protein: ENSMUSP00000134696
Gene: ENSMUSG00000033335
AA Change: S397N

Domain	Start	End	E-Value	Type
DYNc	1	196	8.6e-138	SMART
low complexity region	249	264	N/A	INTRINSIC
PH	467	574	8e-13	SMART
GED	595	686	2.57e-28	SMART
low complexity region	687	699	N/A	INTRINSIC
low complexity region	724	746	N/A	INTRINSIC
low complexity region	778	805	N/A	INTRINSIC

Coding Region Coverage

1x: 98.9%
3x: 98.0%
10x: 95.1%
20x: 88.3%

Validation Efficiency

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] Dynamins represent one of the subfamilies of GTP-binding proteins. These proteins share considerable sequence similarity over the N-terminal portion of the molecule, which contains the GTPase domain. Dynamins are associated with microtubules. They have been implicated in cell processes such as endocytosis and cell motility, and in alterations of the membrane that accompany certain activities such as bone resorption by osteoclasts. Dynamins bind many proteins that bind actin and other cytoskeletal proteins. Dynamins can also self-assemble, a process that stimulates GTPase activity. Five alternatively spliced transcripts encoding different proteins have been described. Additional alternatively spliced transcripts may exist, but their full-length nature has not been determined. [provided by RefSeq, Jun 2010]
PHENOTYPE: Mice homozygous for a targeted allele die prior to E8-E12. Mice heterozygous for a knock-out allele exhibit muscle atrophy and weakness, intermyofibrillar disorganization, and centrally localized mitochondria and sarcoplasmic reticulum. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 102 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4930522L14Rik	A	G	5: 109,884,067 (GRCm39)	F597S	probably benign	Het
Aasdh	C	A	5: 77,036,501 (GRCm39)	E347*	probably null	Het
Abca16	G	T	7: 120,126,309 (GRCm39)	C1155F	probably damaging	Het
Adam26a	T	C	8: 44,021,918 (GRCm39)	D524G	probably damaging	Het
Adamts20	G	C	15: 94,277,656 (GRCm39)	H269D	probably benign	Het
Akap9	T	A	5: 4,100,145 (GRCm39)		probably null	Het
Akt3	T	C	1: 176,877,693 (GRCm39)	I358M	possibly damaging	Het
Aldh9a1	G	T	1: 167,189,376 (GRCm39)	A375S	probably damaging	Het
Alg2	A	G	4: 47,473,974 (GRCm39)	S105P	probably benign	Het
Amph	A	G	13: 19,288,515 (GRCm39)	T335A	probably damaging	Het
Ank2	C	T	3: 126,756,050 (GRCm39)	V1056M	probably damaging	Het
Apoh	A	G	11: 108,298,204 (GRCm39)	D168G	probably benign	Het
Arfgef3	C	T	10: 18,465,454 (GRCm39)	A2130T	probably damaging	Het
Arhgap30	A	G	1: 171,230,897 (GRCm39)	D218G	probably benign	Het
Ascc3	C	T	10: 50,699,894 (GRCm39)	P1906S	probably damaging	Het
Atp11b	T	G	3: 35,861,157 (GRCm39)		probably null	Het
B4galnt2	A	G	11: 95,759,255 (GRCm39)	V343A	probably damaging	Het
Barhl1	T	C	2: 28,799,785 (GRCm39)	Y280C	probably damaging	Het
Bcar1	A	T	8: 112,447,669 (GRCm39)	Y103N	probably damaging	Het
Bid	A	G	6: 120,872,707 (GRCm39)	I150T	probably benign	Het
Ccdc171	T	C	4: 83,467,876 (GRCm39)	S74P	probably damaging	Het
Ccni	A	T	5: 93,336,113 (GRCm39)		probably null	Het
Cct8l1	A	G	5: 25,721,891 (GRCm39)	E202G	probably benign	Het
Cd200r3	A	G	16: 44,774,622 (GRCm39)	K212E	probably benign	Het
Cdh19	A	G	1: 110,817,694 (GRCm39)	S683P	probably damaging	Het
Ces2b	A	T	8: 105,559,413 (GRCm39)	H93L	probably benign	Het
Cimip2b	T	A	4: 43,427,514 (GRCm39)	Q270L	possibly damaging	Het
Clec4a1	G	A	6: 122,907,654 (GRCm39)	C114Y	probably damaging	Het
Dcc	G	T	18: 71,675,320 (GRCm39)	S636*	probably null	Het
Dcdc2c	T	C	12: 28,580,472 (GRCm39)	D187G	possibly damaging	Het
Dgkb	G	T	12: 38,164,657 (GRCm39)	E150*	probably null	Het
Dhx30	A	G	9: 109,915,029 (GRCm39)	L884P	probably damaging	Het
Dmwd	T	G	7: 18,815,228 (GRCm39)		probably null	Het
Dnah17	T	A	11: 117,932,980 (GRCm39)	N3593Y	probably damaging	Het
Elk4	G	A	1: 131,945,419 (GRCm39)	G99D	probably damaging	Het
Entpd1	A	T	19: 40,727,965 (GRCm39)		probably benign	Het
Fam114a1	T	A	5: 65,137,070 (GRCm39)	D4E	probably damaging	Het
Fbln2	A	G	6: 91,241,681 (GRCm39)	D754G	probably damaging	Het
Fhip2a	T	C	19: 57,367,069 (GRCm39)	V204A	probably benign	Het
Foxred2	T	C	15: 77,840,035 (GRCm39)	N85S	probably damaging	Het
Fut9	A	G	4: 25,799,591 (GRCm39)		probably benign	Het
Gm1818	G	A	12: 48,606,607 (GRCm39)		noncoding transcript	Het
Gm4894	C	A	9: 49,190,000 (GRCm39)	Q92K	unknown	Het
Gpx2	T	C	12: 76,839,574 (GRCm39)	I141M	probably benign	Het
Gusb	T	C	5: 130,024,326 (GRCm39)	T476A	probably damaging	Het
Hmmr	G	A	11: 40,612,667 (GRCm39)	T180I	possibly damaging	Het
Itgbl1	T	C	14: 124,210,780 (GRCm39)	Y493H	probably benign	Het
Klhdc9	G	T	1: 171,187,951 (GRCm39)	C93*	probably null	Het
Ldaf1	T	C	7: 119,715,535 (GRCm39)	S120P	probably damaging	Het
Lpar3	A	G	3: 145,990,506 (GRCm39)	K275E	probably damaging	Het
Lrp1b	A	G	2: 40,692,897 (GRCm39)		probably null	Het
Lrrc63	C	T	14: 75,322,389 (GRCm39)	G572S	probably damaging	Het
Mapk11	A	T	15: 89,030,685 (GRCm39)	D98E	probably benign	Het
Mgat4f	T	A	1: 134,317,714 (GRCm39)	M162K	probably benign	Het
Net1	G	A	13: 3,934,905 (GRCm39)	R374W	probably damaging	Het
Nlrp4g	T	A	9: 124,354,005 (GRCm38)		noncoding transcript	Het
Nrap	T	A	19: 56,335,652 (GRCm39)	Y923F	probably damaging	Het
Or13a20	T	A	7: 140,232,534 (GRCm39)	M214K	probably benign	Het
Or4c108	T	A	2: 88,803,834 (GRCm39)	I134F	probably damaging	Het
Or6c215	A	T	10: 129,637,932 (GRCm39)	V154E	probably benign	Het
Plxnc1	A	G	10: 94,677,335 (GRCm39)	V964A	probably damaging	Het
Pmfbp1	A	G	8: 110,262,498 (GRCm39)	I731V	probably benign	Het
Polq	T	A	16: 36,848,274 (GRCm39)	S294T	probably benign	Het
Pomgnt2	T	C	9: 121,811,620 (GRCm39)	D387G	probably benign	Het
Pramel25	T	C	4: 143,520,407 (GRCm39)	V53A	possibly damaging	Het
Prmt2	G	A	10: 76,056,842 (GRCm39)	T227I	probably damaging	Het
Psmd1	T	A	1: 86,010,947 (GRCm39)	F341I	probably damaging	Het
Ptpn23	T	C	9: 110,221,806 (GRCm39)	M127V	probably benign	Het
Ptprc	A	G	1: 138,017,238 (GRCm39)	F483L	probably damaging	Het
Rab35	A	C	5: 115,778,147 (GRCm39)	I38L	probably damaging	Het
Rapgef6	A	G	11: 54,548,143 (GRCm39)	T486A	probably damaging	Het
Rgl3	A	T	9: 21,899,004 (GRCm39)	C68*	probably null	Het
Rilpl1	T	C	5: 124,653,594 (GRCm39)	E189G	possibly damaging	Het
Rnf217	T	C	10: 31,393,520 (GRCm39)	I354V	probably benign	Het
Rspo3	T	C	10: 29,382,524 (GRCm39)	D50G	probably damaging	Het
Sbno1	A	G	5: 124,512,672 (GRCm39)	S1366P	possibly damaging	Het
Sema3c	A	G	5: 17,899,684 (GRCm39)	D392G	probably benign	Het
Serpinb9e	A	T	13: 33,436,935 (GRCm39)	Y85F	probably benign	Het
Shprh	C	T	10: 11,032,863 (GRCm39)	T283I	probably benign	Het
Sipa1l1	T	C	12: 82,388,103 (GRCm39)	S110P	probably benign	Het
Slc16a12	T	A	19: 34,652,643 (GRCm39)	I168F	probably damaging	Het
Slc23a3	A	G	1: 75,109,268 (GRCm39)	S221P	probably damaging	Het
Slc35b3	A	T	13: 39,116,887 (GRCm39)	I366K	possibly damaging	Het
Slc44a5	T	C	3: 153,949,252 (GRCm39)		probably null	Het
Slc5a12	A	T	2: 110,450,753 (GRCm39)	D316V	probably damaging	Het
Ssr3	A	G	3: 65,299,874 (GRCm39)	S29P	probably damaging	Het
Taf2	G	A	15: 54,890,619 (GRCm39)	Q1055*	probably null	Het
Them6	A	T	15: 74,593,367 (GRCm39)	D75V	probably damaging	Het
Tom1l2	A	G	11: 60,149,744 (GRCm39)	S239P	probably damaging	Het
Tspear	A	G	10: 77,710,877 (GRCm39)	T500A	probably damaging	Het
Tubgcp6	G	A	15: 88,985,752 (GRCm39)	A1487V	probably damaging	Het
Uba7	G	A	9: 107,856,190 (GRCm39)	V522I	possibly damaging	Het
Virma	C	A	4: 11,521,147 (GRCm39)	C901*	probably null	Het
Vmn1r172	A	T	7: 23,359,312 (GRCm39)	I66F	possibly damaging	Het
Vmn2r82	A	T	10: 79,215,010 (GRCm39)	Y331F	probably benign	Het
Wdr55	G	A	18: 36,895,451 (GRCm39)	V143I	probably benign	Het
Zbtb49	A	T	5: 38,371,307 (GRCm39)	D191E	possibly damaging	Het
Zfhx4	A	G	3: 5,307,071 (GRCm39)	H99R	probably damaging	Het
Zfp1005	C	T	2: 150,110,680 (GRCm39)	H457Y	unknown	Het
Zfp560	C	T	9: 20,259,263 (GRCm39)	C533Y	probably damaging	Het
Zfp646	C	T	7: 127,478,354 (GRCm39)	A177V	probably benign	Het
Zfp653	C	T	9: 21,967,074 (GRCm39)	E604K	probably damaging	Het

Other mutations in Dnm2

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01446:Dnm2	APN	9	21,392,672 (GRCm39)	missense	probably damaging	1.00
IGL01757:Dnm2	APN	9	21,376,915 (GRCm39)	missense	probably damaging	1.00
IGL02142:Dnm2	APN	9	21,411,649 (GRCm39)	missense	probably damaging	1.00
IGL02195:Dnm2	APN	9	21,336,545 (GRCm39)	missense	probably damaging	1.00
IGL02472:Dnm2	APN	9	21,397,004 (GRCm39)	missense	possibly damaging	0.55
IGL03161:Dnm2	APN	9	21,397,020 (GRCm39)	splice site	probably benign
IGL03392:Dnm2	APN	9	21,385,907 (GRCm39)	missense	probably damaging	1.00
R0302:Dnm2	UTSW	9	21,411,639 (GRCm39)	missense	probably benign	0.27
R0743:Dnm2	UTSW	9	21,411,561 (GRCm39)	missense	probably damaging	1.00
R0945:Dnm2	UTSW	9	21,416,956 (GRCm39)	missense	probably damaging	0.97
R1629:Dnm2	UTSW	9	21,415,754 (GRCm39)	missense	probably damaging	1.00
R1678:Dnm2	UTSW	9	21,378,828 (GRCm39)	missense	possibly damaging	0.89
R1848:Dnm2	UTSW	9	21,416,977 (GRCm39)	missense	possibly damaging	0.87
R2084:Dnm2	UTSW	9	21,411,667 (GRCm39)	critical splice donor site	probably null
R2214:Dnm2	UTSW	9	21,397,019 (GRCm39)	critical splice donor site	probably null
R2346:Dnm2	UTSW	9	21,378,852 (GRCm39)	missense	probably damaging	1.00
R3711:Dnm2	UTSW	9	21,417,669 (GRCm39)	unclassified	probably benign
R3796:Dnm2	UTSW	9	21,416,783 (GRCm39)	missense	probably benign
R4017:Dnm2	UTSW	9	21,405,900 (GRCm39)	missense	probably damaging	1.00
R4432:Dnm2	UTSW	9	21,402,600 (GRCm39)	intron	probably benign
R4583:Dnm2	UTSW	9	21,415,742 (GRCm39)	missense	probably damaging	1.00
R4604:Dnm2	UTSW	9	21,415,960 (GRCm39)	critical splice donor site	probably null
R4735:Dnm2	UTSW	9	21,385,883 (GRCm39)	missense	probably damaging	0.99
R4803:Dnm2	UTSW	9	21,385,925 (GRCm39)	missense	probably damaging	1.00
R4832:Dnm2	UTSW	9	21,385,975 (GRCm39)	splice site	probably null
R4836:Dnm2	UTSW	9	21,402,626 (GRCm39)	intron	probably benign
R4948:Dnm2	UTSW	9	21,415,829 (GRCm39)	missense	possibly damaging	0.90
R5059:Dnm2	UTSW	9	21,415,874 (GRCm39)	missense	probably damaging	1.00
R5291:Dnm2	UTSW	9	21,390,203 (GRCm39)	missense	probably damaging	1.00
R5538:Dnm2	UTSW	9	21,416,923 (GRCm39)	missense	probably benign	0.05
R5613:Dnm2	UTSW	9	21,383,963 (GRCm39)	missense	probably damaging	1.00
R5805:Dnm2	UTSW	9	21,378,965 (GRCm39)	missense	probably damaging	0.97
R6253:Dnm2	UTSW	9	21,411,571 (GRCm39)	missense	probably damaging	1.00
R6586:Dnm2	UTSW	9	21,416,942 (GRCm39)	missense	probably benign	0.32
R6826:Dnm2	UTSW	9	21,415,767 (GRCm39)	nonsense	probably null
R6855:Dnm2	UTSW	9	21,387,881 (GRCm39)	missense	probably damaging	1.00
R7121:Dnm2	UTSW	9	21,385,862 (GRCm39)	missense	probably benign	0.31
R7307:Dnm2	UTSW	9	21,396,983 (GRCm39)	missense	probably damaging	1.00
R7318:Dnm2	UTSW	9	21,416,863 (GRCm39)	missense	possibly damaging	0.46
R7467:Dnm2	UTSW	9	21,392,672 (GRCm39)	missense	probably damaging	1.00
R7619:Dnm2	UTSW	9	21,416,930 (GRCm39)	missense	probably benign	0.00
R7673:Dnm2	UTSW	9	21,392,717 (GRCm39)	critical splice donor site	probably null
R8474:Dnm2	UTSW	9	21,377,016 (GRCm39)	missense	probably damaging	1.00
R9275:Dnm2	UTSW	9	21,416,977 (GRCm39)	missense	possibly damaging	0.87
R9278:Dnm2	UTSW	9	21,416,977 (GRCm39)	missense	possibly damaging	0.87
R9383:Dnm2	UTSW	9	21,383,920 (GRCm39)	missense	probably damaging	1.00
R9610:Dnm2	UTSW	9	21,414,973 (GRCm39)	nonsense	probably null

Predicted Primers

PCR Primer
(F):5'- TCTGGGTAGTAAGTGTCATTCAC -3'
(R):5'- CTGACTAATTTATTTGGAAGCCAGG -3'

Sequencing Primer
(F):5'- GCCACTTTCCACCTCCAATCG -3'
(R):5'- TATTTGGAAGCCAGGTTGAGTTAAAG -3'

Posted On

2016-04-15