Mutagenetix > Incidental Mutation

Incidental Mutation 'R4933:Shc3'

380738

Institutional Source

Beutler Lab

Gene Symbol

Shc3

Ensembl Gene

ENSMUSG00000021448

Gene Name

src homology 2 domain-containing transforming protein C3

Synonyms

Rai, ShcC, N-Shc

MMRRC Submission

042533-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.082) question?

Stock #

R4933 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

51431041-51569419 bp(-) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

G to T at 51442769 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Threonine to Asparagine at position 406 (T406N)

Ref Sequence

ENSEMBL: ENSMUSP00000021898 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000021898] [ENSMUST00000223543]

AlphaFold

Q61120

Predicted Effect

probably benign
Transcript: ENSMUST00000021898
AA Change: T406N

PolyPhen 2 Score 0.029 (Sensitivity: 0.95; Specificity: 0.82)

SMART Domains

Protein: ENSMUSP00000021898
Gene: ENSMUSG00000021448
AA Change: T406N

Domain	Start	End	E-Value	Type
PTB	30	194	5.36e-41	SMART
SH2	377	456	6.38e-26	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000223543

Meta Mutation Damage Score

0.1382

Coding Region Coverage

1x: 99.0%
3x: 98.1%
10x: 95.4%
20x: 89.3%

Validation Efficiency

97% (73/75)

MGI Phenotype

PHENOTYPE: Mice homozygous for disruptions in this gene display a normal phenotype. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 55 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
2610021A01Rik	A	G	7: 41,626,802	E643G	probably damaging	Het
4430402I18Rik	G	T	19: 28,941,775	H195N	possibly damaging	Het
Abca2	T	C	2: 25,444,827	V1937A	probably benign	Het
Acot10	A	T	15: 20,666,330	N108K	possibly damaging	Het
Agtpbp1	A	T	13: 59,500,572	M478K	probably benign	Het
Akirin1	G	A	4: 123,736,858	S191F	probably damaging	Het
Aurkb	T	C	11: 69,048,144		probably benign	Het
Cabyr	T	C	18: 12,744,492		probably benign	Het
Ccp110	A	G	7: 118,725,319	E688G	probably damaging	Het
Champ1	T	A	8: 13,879,137	S432T	probably benign	Het
Crybg1	T	A	10: 43,999,213	N633I	probably damaging	Het
Dagla	A	T	19: 10,269,715		probably null	Het
Dkkl1	A	T	7: 45,211,525	L10Q	probably null	Het
Dnah8	G	A	17: 30,748,568	D2585N	probably benign	Het
E430018J23Rik	A	G	7: 127,393,349	Y30H	probably damaging	Het
Fndc7	G	T	3: 108,876,670	Q208K	probably benign	Het
Gins4	A	T	8: 23,234,780	C53S	probably damaging	Het
Gja8	T	A	3: 96,919,035		probably benign	Het
Golph3l	T	A	3: 95,617,423	N328K	probably benign	Het
Haus6	A	C	4: 86,585,287		probably benign	Het
Hdac5	A	G	11: 102,200,563		probably benign	Het
Ide	A	G	19: 37,277,756	Y883H	unknown	Het
Igf2r	A	G	17: 12,691,877		probably null	Het
Kdm3b	T	C	18: 34,810,393	Y723H	probably damaging	Het
Kif21b	G	A	1: 136,151,325		probably null	Het
Lancl1	A	T	1: 67,021,034	N77K	probably benign	Het
Lyst	T	A	13: 13,637,764	N920K	probably damaging	Het
Lyst	G	A	13: 13,759,378	V3554I	probably benign	Het
Map1a	G	A	2: 121,305,905	A2163T	probably damaging	Het
Mapk7	G	T	11: 61,493,908		probably benign	Het
Myo10	C	A	15: 25,781,118	Q154K	probably damaging	Het
Olfr13	C	T	6: 43,174,321	L112F	probably benign	Het
Olfr132	A	G	17: 38,130,550	I214T	probably damaging	Het
Pcdhgb2	G	A	18: 37,692,214	V753M	probably benign	Het
Pnn	T	A	12: 59,070,227	L195Q	probably damaging	Het
Pot1a	A	G	6: 25,771,541	V227A	possibly damaging	Het
Ppp1r21	T	A	17: 88,547,621	D109E	probably benign	Het
Prr15l	G	A	11: 96,934,762	G73S	probably damaging	Het
Rnf148	A	G	6: 23,654,340	F219S	probably benign	Het
Rnpep	C	A	1: 135,267,026		probably benign	Het
Ryr1	T	C	7: 29,104,298	T643A	probably damaging	Het
Ryr2	A	T	13: 11,945,945	C36S	probably damaging	Het
Slit3	G	T	11: 35,688,593	G1199V	probably damaging	Het
Sptbn5	G	A	2: 120,050,120		noncoding transcript	Het
St8sia6	T	C	2: 13,665,442	N236D	probably damaging	Het
Stpg1	A	T	4: 135,506,416	Q3L	probably benign	Het
Sult3a1	T	A	10: 33,866,554	I59N	probably damaging	Het
Svs1	T	C	6: 48,987,492	S145P	probably damaging	Het
Vmn1r208	T	G	13: 22,772,788	I180L	probably benign	Het
Vmn2r51	A	T	7: 10,098,320	N446K	probably damaging	Het
Vmn2r63	A	T	7: 42,903,978	I618N	probably damaging	Het
Wrn	T	C	8: 33,322,343	N182S	probably benign	Het
Zfp296	G	T	7: 19,579,712	C164F	possibly damaging	Het
Zmynd8	A	G	2: 165,834,951	V249A	possibly damaging	Het
Zswim2	A	G	2: 83,925,227	L110P	probably damaging	Het

Other mutations in Shc3

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00555:Shc3	APN	13	51461343	missense	probably damaging	0.98
IGL00914:Shc3	APN	13	51480227	splice site	probably benign
IGL01417:Shc3	APN	13	51431164	missense	probably benign	0.10
IGL01536:Shc3	APN	13	51516559	missense	probably damaging	1.00
Massless	UTSW	13	51442973	missense	possibly damaging	0.92
Singularity	UTSW	13	51442820	splice site	probably null
R0499:Shc3	UTSW	13	51480228	splice site	probably benign
R0941:Shc3	UTSW	13	51480206	missense	probably benign
R1652:Shc3	UTSW	13	51472839	missense	probably damaging	0.99
R1739:Shc3	UTSW	13	51482916	missense	probably damaging	0.97
R1750:Shc3	UTSW	13	51449292	missense	probably damaging	1.00
R1817:Shc3	UTSW	13	51472852	missense	possibly damaging	0.93
R1848:Shc3	UTSW	13	51461388	missense	probably damaging	1.00
R1991:Shc3	UTSW	13	51442836	missense	probably benign	0.01
R2103:Shc3	UTSW	13	51442836	missense	probably benign	0.01
R4426:Shc3	UTSW	13	51480094	splice site	probably null
R4434:Shc3	UTSW	13	51449266	missense	probably benign	0.00
R4823:Shc3	UTSW	13	51451570	missense	probably benign
R4998:Shc3	UTSW	13	51442820	splice site	probably null
R5153:Shc3	UTSW	13	51461377	missense	probably damaging	1.00
R5200:Shc3	UTSW	13	51516565	missense	probably damaging	1.00
R5659:Shc3	UTSW	13	51516594	missense	probably damaging	1.00
R6035:Shc3	UTSW	13	51461432	missense	probably damaging	1.00
R6035:Shc3	UTSW	13	51461432	missense	probably damaging	1.00
R6346:Shc3	UTSW	13	51451615	missense	possibly damaging	0.93
R6434:Shc3	UTSW	13	51449290	missense	probably damaging	1.00
R6457:Shc3	UTSW	13	51482879	splice site	probably null
R6580:Shc3	UTSW	13	51442773	missense	probably benign
R6597:Shc3	UTSW	13	51442973	missense	possibly damaging	0.92
R6906:Shc3	UTSW	13	51466559	missense	probably damaging	0.97
R7003:Shc3	UTSW	13	51466552	missense	probably benign	0.14
R7104:Shc3	UTSW	13	51431205	missense	possibly damaging	0.89
R7420:Shc3	UTSW	13	51431235	missense	probably benign	0.02
R7476:Shc3	UTSW	13	51448006	missense	probably benign
R8312:Shc3	UTSW	13	51442718	missense	probably damaging	1.00
R8774:Shc3	UTSW	13	51461439	missense	probably damaging	1.00
R8774-TAIL:Shc3	UTSW	13	51461439	missense	probably damaging	1.00
R8850:Shc3	UTSW	13	51480212	missense	probably benign	0.04
Z1177:Shc3	UTSW	13	51442928	missense	probably benign	0.00

Predicted Primers

PCR Primer
(F):5'- TAAGTCTCCAGTCCCTGACAG -3'
(R):5'- TGAAGATGCCCTGAGAAACCAG -3'

Sequencing Primer
(F):5'- GGTACTGTAAACAGAGGAGGC -3'
(R):5'- GGCCCCATGTTGAGCAAAG -3'

Posted On

2016-04-15