Incidental Mutation 'R4959:Pik3c2g'
ID 382157
Institutional Source Beutler Lab
Gene Symbol Pik3c2g
Ensembl Gene ENSMUSG00000030228
Gene Name phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma
Synonyms
MMRRC Submission 042556-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.087) question?
Stock # R4959 (G1)
Quality Score 225
Status Not validated
Chromosome 6
Chromosomal Location 139587221-139969284 bp(+) (GRCm38)
Type of Mutation missense
DNA Base Change (assembly) T to C at 139843931 bp (GRCm38)
Zygosity Heterozygous
Amino Acid Change Tyrosine to Histidine at position 385 (Y385H)
Ref Sequence ENSEMBL: ENSMUSP00000107499 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000087657] [ENSMUST00000111868] [ENSMUST00000218528]
AlphaFold no structure available at present
Predicted Effect probably benign
Transcript: ENSMUST00000087657
AA Change: Y17H

PolyPhen 2 Score 0.042 (Sensitivity: 0.94; Specificity: 0.83)
SMART Domains Protein: ENSMUSP00000084939
Gene: ENSMUSG00000030228
AA Change: Y17H

DomainStartEndE-ValueType
PI3Kc 125 387 2.11e-109 SMART
PX 411 515 1.24e-21 SMART
C2 550 647 1.34e-7 SMART
Predicted Effect possibly damaging
Transcript: ENSMUST00000111868
AA Change: Y385H

PolyPhen 2 Score 0.652 (Sensitivity: 0.87; Specificity: 0.91)
SMART Domains Protein: ENSMUSP00000107499
Gene: ENSMUSG00000030228
AA Change: Y385H

DomainStartEndE-ValueType
SCOP:d1e8xa2 1 83 4e-16 SMART
PI3Ka 103 288 7.6e-29 SMART
PI3Kc 375 637 2.11e-109 SMART
PX 661 765 1.24e-21 SMART
C2 800 897 1.34e-7 SMART
Predicted Effect noncoding transcript
Transcript: ENSMUST00000187069
Predicted Effect noncoding transcript
Transcript: ENSMUST00000187223
SMART Domains Protein: ENSMUSP00000140589
Gene: ENSMUSG00000030228

DomainStartEndE-ValueType
Pfam:PI3_PI4_kinase 123 226 3.4e-16 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000187448
Predicted Effect noncoding transcript
Transcript: ENSMUST00000189374
SMART Domains Protein: ENSMUSP00000139763
Gene: ENSMUSG00000030228

DomainStartEndE-ValueType
PI3Kc 125 387 2.11e-109 SMART
PX 411 515 1.24e-21 SMART
C2 550 647 1.34e-7 SMART
Predicted Effect noncoding transcript
Transcript: ENSMUST00000191013
Predicted Effect noncoding transcript
Transcript: ENSMUST00000206646
AA Change: Y17H
Predicted Effect probably benign
Transcript: ENSMUST00000218528
AA Change: Y267H

PolyPhen 2 Score 0.070 (Sensitivity: 0.94; Specificity: 0.84)
Meta Mutation Damage Score 0.2036 question?
Coding Region Coverage
  • 1x: 99.1%
  • 3x: 98.2%
  • 10x: 95.6%
  • 20x: 89.7%
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene belongs to the phosphoinositide 3-kinase (PI3K) family. PI3-kinases play roles in signaling pathways involved in cell proliferation, oncogenic transformation, cell survival, cell migration, and intracellular protein trafficking. This protein contains a lipid kinase catalytic domain as well as a C-terminal C2 domain, a characteristic of class II PI3-kinases. C2 domains act as calcium-dependent phospholipid binding motifs that mediate translocation of proteins to membranes, and may also mediate protein-protein interactions. This gene may play a role in several diseases, including type II diabetes. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jan 2014]
PHENOTYPE: Mice homozygous for a knock-out allelel exhibit reduced liver glucogen accumulation, hyperlipidemia, adiposity and insulin resistance with age or after consumption of a high-fat diet. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 99 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
2700049A03Rik G T 12: 71,164,546 (GRCm38) E685* probably null Het
2700049A03Rik A T 12: 71,164,547 (GRCm38) E685V possibly damaging Het
6820408C15Rik T A 2: 152,440,888 (GRCm38) I221K possibly damaging Het
Aadacl3 A T 4: 144,457,086 (GRCm38) C136S probably benign Het
Abhd16a T A 17: 35,102,342 (GRCm38) S498T probably benign Het
Acrv1 G A 9: 36,694,700 (GRCm38) probably null Het
Adamts18 G A 8: 113,736,725 (GRCm38) R830* probably null Het
Art3 A G 5: 92,403,619 (GRCm38) Y279C probably damaging Het
Atm A T 9: 53,515,301 (GRCm38) D552E probably benign Het
Ccdc154 T C 17: 25,170,914 (GRCm38) L508P probably damaging Het
Ccser2 A T 14: 36,940,796 (GRCm38) S144T probably benign Het
Cgn C T 3: 94,778,254 (GRCm38) A320T probably benign Het
Cklf A G 8: 104,261,552 (GRCm38) K106E probably benign Het
Clec12a C A 6: 129,353,665 (GRCm38) T70K probably benign Het
CN725425 G A 15: 91,245,701 (GRCm38) A256T possibly damaging Het
Crb2 G T 2: 37,790,470 (GRCm38) R470L probably damaging Het
Csn1s1 T G 5: 87,673,261 (GRCm38) S33A probably benign Het
D3Ertd254e C T 3: 36,164,136 (GRCm38) R102C possibly damaging Het
D630045J12Rik C T 6: 38,148,367 (GRCm38) V1571M possibly damaging Het
Deup1 G A 9: 15,612,014 (GRCm38) Q58* probably null Het
Dph2 T A 4: 117,891,330 (GRCm38) D82V probably damaging Het
Dsp C T 13: 38,191,710 (GRCm38) A1157V probably benign Het
Evi5l G T 8: 4,205,406 (GRCm38) V477L probably benign Het
Fam187b T A 7: 30,982,262 (GRCm38) H131Q probably damaging Het
Fam193b A G 13: 55,543,284 (GRCm38) I259T probably damaging Het
Fam91a1 A G 15: 58,431,210 (GRCm38) T323A probably benign Het
Fat4 T G 3: 38,983,046 (GRCm38) S3616A probably benign Het
Fbxo38 A T 18: 62,522,507 (GRCm38) N369K probably benign Het
Fitm1 T A 14: 55,576,374 (GRCm38) probably null Het
Fkbp5 T C 17: 28,428,369 (GRCm38) E164G probably damaging Het
Fpr-rs3 T C 17: 20,623,949 (GRCm38) Y310C possibly damaging Het
Fryl A T 5: 73,035,058 (GRCm38) M2678K probably benign Het
Fsip2 T C 2: 82,984,825 (GRCm38) I3634T probably benign Het
Gm3233 T C 10: 77,759,565 (GRCm38) probably benign Het
Gzmd T G 14: 56,132,498 (GRCm38) T9P unknown Het
Htr2b A T 1: 86,100,091 (GRCm38) I231N probably damaging Het
Il2ra A G 2: 11,676,853 (GRCm38) T90A possibly damaging Het
Kbtbd2 A G 6: 56,781,958 (GRCm38) F60S probably benign Het
Kif21b G A 1: 136,148,370 (GRCm38) C299Y possibly damaging Het
Lsm5 A T 6: 56,703,324 (GRCm38) D44E probably damaging Het
Mapk1 T A 16: 17,018,306 (GRCm38) M106K probably damaging Het
Mpp2 A G 11: 102,063,291 (GRCm38) V193A probably damaging Het
Muc4 T C 16: 32,754,319 (GRCm38) S1398P possibly damaging Het
Ndufs2 A G 1: 171,238,009 (GRCm38) Y282H probably damaging Het
Nes T A 3: 87,975,676 (GRCm38) L414Q probably damaging Het
Neurl2 T A 2: 164,833,202 (GRCm38) probably null Het
Ngef A G 1: 87,503,348 (GRCm38) F159S possibly damaging Het
Nlrx1 T C 9: 44,254,151 (GRCm38) H816R possibly damaging Het
Olfr1178 T A 2: 88,391,330 (GRCm38) L28I probably benign Het
Olfr1204 T C 2: 88,852,172 (GRCm38) V74A possibly damaging Het
Olfr1293-ps T A 2: 111,527,624 (GRCm38) F103L probably damaging Het
Olfr1417 A G 19: 11,828,936 (GRCm38) L30P probably benign Het
Olfr381 A T 11: 73,486,067 (GRCm38) Y252* probably null Het
Olfr453 T C 6: 42,744,687 (GRCm38) S217P probably damaging Het
Olfr855 A G 9: 19,585,208 (GRCm38) T224A probably benign Het
Pcgf2 A T 11: 97,691,689 (GRCm38) Y7N possibly damaging Het
Pdlim5 G A 3: 142,311,979 (GRCm38) probably benign Het
Pdzd2 A G 15: 12,375,648 (GRCm38) V1467A probably damaging Het
Pigp C A 16: 94,359,147 (GRCm38) G134V probably benign Het
Pnliprp2 G A 19: 58,766,318 (GRCm38) E265K probably benign Het
Prl3c1 G T 13: 27,202,488 (GRCm38) probably null Het
Ptpn4 A T 1: 119,765,096 (GRCm38) Y110* probably null Het
Ptprq C T 10: 107,686,555 (GRCm38) V546I probably damaging Het
Rd3l C T 12: 111,980,144 (GRCm38) probably null Het
Rpl37 G A 15: 5,117,646 (GRCm38) R56Q possibly damaging Het
Rttn A T 18: 89,042,168 (GRCm38) H998L probably damaging Het
Rufy1 A T 11: 50,401,488 (GRCm38) F491L probably benign Het
Simc1 T G 13: 54,525,318 (GRCm38) V493G possibly damaging Het
Slc22a14 CTTTCCTGAA C 9: 119,174,035 (GRCm38) probably benign Het
Slc25a46 A T 18: 31,602,754 (GRCm38) I144N possibly damaging Het
Smtn A T 11: 3,527,825 (GRCm38) M1K probably null Het
Snd1 C A 6: 28,884,251 (GRCm38) Y766* probably null Het
Spata31d1d C T 13: 59,727,288 (GRCm38) G811D probably damaging Het
Spta1 A C 1: 174,246,608 (GRCm38) D2371A probably damaging Het
Stard6 A C 18: 70,498,560 (GRCm38) D74A possibly damaging Het
Stim2 G T 5: 54,105,370 (GRCm38) R318L probably benign Het
Sufu C T 19: 46,475,552 (GRCm38) T401I possibly damaging Het
Suz12 G A 11: 80,029,231 (GRCm38) G539D probably damaging Het
Sytl2 C G 7: 90,376,037 (GRCm38) S411C probably damaging Het
Taf6 G A 5: 138,183,203 (GRCm38) Q156* probably null Het
Tead4 T C 6: 128,270,987 (GRCm38) D29G probably damaging Het
Thada T C 17: 84,444,183 (GRCm38) Y455C probably damaging Het
Tlr6 G C 5: 64,953,659 (GRCm38) T635S possibly damaging Het
Tlr9 A G 9: 106,224,677 (GRCm38) D389G probably benign Het
Tmem54 A T 4: 129,108,280 (GRCm38) H40L probably damaging Het
Trappc9 G T 15: 72,937,056 (GRCm38) N540K probably damaging Het
Trbv29 C T 6: 41,271,854 (GRCm38) S106F probably damaging Het
Trrap A T 5: 144,856,960 (GRCm38) H3384L probably damaging Het
Usp16 T A 16: 87,480,914 (GRCm38) M684K probably damaging Het
Vat1 G A 11: 101,460,600 (GRCm38) T305M probably damaging Het
Vmn2r85 A G 10: 130,421,433 (GRCm38) S544P probably damaging Het
Vps8 T C 16: 21,459,786 (GRCm38) S267P probably damaging Het
Ylpm1 T A 12: 85,049,945 (GRCm38) V1242E probably damaging Het
Zfp322a T C 13: 23,356,882 (GRCm38) Y230C probably damaging Het
Zfp352 T A 4: 90,224,139 (GRCm38) V172E probably benign Het
Zfp936 A T 7: 43,189,610 (GRCm38) H167L probably damaging Het
Zkscan14 A G 5: 145,195,492 (GRCm38) Y410H probably benign Het
Zkscan17 A G 11: 59,503,712 (GRCm38) M21T probably damaging Het
Zswim4 G T 8: 84,212,223 (GRCm38) A1010D probably benign Het
Other mutations in Pik3c2g
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00159:Pik3c2g APN 6 139,896,125 (GRCm38) missense probably damaging 1.00
IGL01355:Pik3c2g APN 6 139,852,857 (GRCm38) missense probably damaging 0.98
IGL01579:Pik3c2g APN 6 139,754,741 (GRCm38) nonsense probably null
IGL01580:Pik3c2g APN 6 139,622,516 (GRCm38) missense probably damaging 0.99
IGL01587:Pik3c2g APN 6 139,754,741 (GRCm38) nonsense probably null
IGL01813:Pik3c2g APN 6 139,622,409 (GRCm38) missense possibly damaging 0.55
IGL02218:Pik3c2g APN 6 139,860,355 (GRCm38) missense probably damaging 1.00
IGL02479:Pik3c2g APN 6 139,918,004 (GRCm38) missense probably benign 0.40
IGL02480:Pik3c2g APN 6 139,852,800 (GRCm38) missense probably damaging 1.00
IGL02721:Pik3c2g APN 6 139,736,973 (GRCm38) missense probably benign 0.15
IGL02967:Pik3c2g APN 6 139,967,828 (GRCm38) missense probably damaging 0.98
IGL03221:Pik3c2g APN 6 139,772,407 (GRCm38) critical splice acceptor site probably null
FR4304:Pik3c2g UTSW 6 139,635,656 (GRCm38) frame shift probably null
FR4340:Pik3c2g UTSW 6 139,635,656 (GRCm38) frame shift probably null
FR4976:Pik3c2g UTSW 6 139,635,654 (GRCm38) frame shift probably null
IGL02837:Pik3c2g UTSW 6 139,626,564 (GRCm38) nonsense probably null
PIT4531001:Pik3c2g UTSW 6 139,859,370 (GRCm38) missense
R0002:Pik3c2g UTSW 6 139,768,745 (GRCm38) missense probably benign 0.08
R0081:Pik3c2g UTSW 6 139,957,793 (GRCm38) missense probably benign 0.05
R0098:Pik3c2g UTSW 6 139,662,443 (GRCm38) missense unknown
R0719:Pik3c2g UTSW 6 139,629,725 (GRCm38) missense probably damaging 1.00
R0740:Pik3c2g UTSW 6 139,633,793 (GRCm38) critical splice donor site probably null
R0837:Pik3c2g UTSW 6 139,957,699 (GRCm38) splice site probably benign
R0840:Pik3c2g UTSW 6 139,896,072 (GRCm38) missense probably damaging 1.00
R1306:Pik3c2g UTSW 6 139,772,428 (GRCm38) missense probably benign
R1501:Pik3c2g UTSW 6 139,844,070 (GRCm38) critical splice donor site probably null
R1591:Pik3c2g UTSW 6 139,748,178 (GRCm38) missense probably benign 0.00
R1666:Pik3c2g UTSW 6 139,635,636 (GRCm38) intron probably benign
R1907:Pik3c2g UTSW 6 139,844,042 (GRCm38) missense probably damaging 1.00
R1970:Pik3c2g UTSW 6 139,900,386 (GRCm38) critical splice donor site probably null
R1982:Pik3c2g UTSW 6 139,622,548 (GRCm38) missense probably damaging 0.97
R2171:Pik3c2g UTSW 6 139,855,286 (GRCm38) nonsense probably null
R2188:Pik3c2g UTSW 6 139,852,874 (GRCm38) missense probably damaging 1.00
R3777:Pik3c2g UTSW 6 139,622,387 (GRCm38) missense probably damaging 1.00
R3778:Pik3c2g UTSW 6 139,622,387 (GRCm38) missense probably damaging 1.00
R3965:Pik3c2g UTSW 6 139,855,292 (GRCm38) missense possibly damaging 0.90
R4076:Pik3c2g UTSW 6 139,852,863 (GRCm38) missense probably damaging 1.00
R4078:Pik3c2g UTSW 6 139,635,610 (GRCm38) intron probably benign
R4108:Pik3c2g UTSW 6 139,730,370 (GRCm38) missense probably benign 0.00
R4461:Pik3c2g UTSW 6 139,841,681 (GRCm38) intron probably benign
R4474:Pik3c2g UTSW 6 139,633,751 (GRCm38) missense probably damaging 0.99
R4509:Pik3c2g UTSW 6 139,720,006 (GRCm38) missense probably benign 0.25
R4646:Pik3c2g UTSW 6 139,720,018 (GRCm38) missense probably benign 0.05
R4732:Pik3c2g UTSW 6 139,935,985 (GRCm38) missense probably benign 0.28
R4733:Pik3c2g UTSW 6 139,935,985 (GRCm38) missense probably benign 0.28
R4854:Pik3c2g UTSW 6 139,768,779 (GRCm38) missense probably damaging 1.00
R4928:Pik3c2g UTSW 6 139,967,802 (GRCm38) missense possibly damaging 0.88
R4973:Pik3c2g UTSW 6 139,843,931 (GRCm38) missense possibly damaging 0.65
R5032:Pik3c2g UTSW 6 139,896,202 (GRCm38) missense probably benign 0.00
R5071:Pik3c2g UTSW 6 139,720,147 (GRCm38) missense probably null 0.00
R5072:Pik3c2g UTSW 6 139,720,147 (GRCm38) missense probably null 0.00
R5073:Pik3c2g UTSW 6 139,720,147 (GRCm38) missense probably null 0.00
R5074:Pik3c2g UTSW 6 139,720,147 (GRCm38) missense probably null 0.00
R5107:Pik3c2g UTSW 6 139,635,625 (GRCm38) intron probably benign
R5186:Pik3c2g UTSW 6 139,622,018 (GRCm38) missense probably damaging 1.00
R5253:Pik3c2g UTSW 6 139,896,257 (GRCm38) critical splice donor site probably null
R5359:Pik3c2g UTSW 6 139,622,123 (GRCm38) missense probably damaging 1.00
R5394:Pik3c2g UTSW 6 139,720,082 (GRCm38) missense probably benign
R5417:Pik3c2g UTSW 6 139,736,943 (GRCm38) missense probably benign
R5435:Pik3c2g UTSW 6 139,715,855 (GRCm38) splice site probably null
R5580:Pik3c2g UTSW 6 139,626,533 (GRCm38) missense probably damaging 0.99
R5664:Pik3c2g UTSW 6 139,737,007 (GRCm38) missense probably damaging 0.98
R5908:Pik3c2g UTSW 6 139,768,710 (GRCm38) missense
R5914:Pik3c2g UTSW 6 139,622,479 (GRCm38) missense probably benign 0.00
R6046:Pik3c2g UTSW 6 139,896,792 (GRCm38) missense probably damaging 1.00
R6046:Pik3c2g UTSW 6 139,622,139 (GRCm38) missense probably damaging 0.96
R6298:Pik3c2g UTSW 6 139,626,563 (GRCm38) missense probably damaging 1.00
R6382:Pik3c2g UTSW 6 139,719,998 (GRCm38) missense possibly damaging 0.88
R6480:Pik3c2g UTSW 6 139,730,469 (GRCm38) missense probably benign 0.27
R6917:Pik3c2g UTSW 6 139,896,173 (GRCm38) missense probably benign 0.00
R6929:Pik3c2g UTSW 6 139,957,776 (GRCm38) missense possibly damaging 0.67
R7022:Pik3c2g UTSW 6 139,622,063 (GRCm38) missense possibly damaging 0.82
R7144:Pik3c2g UTSW 6 139,629,870 (GRCm38) missense probably damaging 1.00
R7213:Pik3c2g UTSW 6 139,860,264 (GRCm38) missense
R7215:Pik3c2g UTSW 6 139,754,863 (GRCm38) missense
R7332:Pik3c2g UTSW 6 139,896,255 (GRCm38) missense
R7357:Pik3c2g UTSW 6 139,633,793 (GRCm38) critical splice donor site probably null
R7359:Pik3c2g UTSW 6 139,967,894 (GRCm38) missense unknown
R7385:Pik3c2g UTSW 6 139,855,353 (GRCm38) missense
R7455:Pik3c2g UTSW 6 139,967,917 (GRCm38) missense unknown
R7651:Pik3c2g UTSW 6 139,622,072 (GRCm38) missense possibly damaging 0.85
R7888:Pik3c2g UTSW 6 139,896,744 (GRCm38) missense
R7923:Pik3c2g UTSW 6 139,633,793 (GRCm38) critical splice donor site probably null
R7964:Pik3c2g UTSW 6 139,882,060 (GRCm38) missense
R8005:Pik3c2g UTSW 6 139,622,069 (GRCm38) missense probably benign 0.01
R8371:Pik3c2g UTSW 6 139,936,056 (GRCm38) missense unknown
R8724:Pik3c2g UTSW 6 139,967,893 (GRCm38) missense unknown
R8733:Pik3c2g UTSW 6 139,768,700 (GRCm38) nonsense probably null
R8809:Pik3c2g UTSW 6 139,768,710 (GRCm38) missense
R8888:Pik3c2g UTSW 6 139,730,366 (GRCm38) nonsense probably null
R8931:Pik3c2g UTSW 6 139,875,367 (GRCm38) missense probably benign 0.02
R9188:Pik3c2g UTSW 6 139,622,403 (GRCm38) missense possibly damaging 0.94
R9336:Pik3c2g UTSW 6 139,875,435 (GRCm38) missense
R9383:Pik3c2g UTSW 6 139,882,016 (GRCm38) nonsense probably null
R9524:Pik3c2g UTSW 6 139,629,770 (GRCm38) missense probably damaging 0.99
R9531:Pik3c2g UTSW 6 139,896,200 (GRCm38) missense
R9630:Pik3c2g UTSW 6 139,622,239 (GRCm38) missense possibly damaging 0.66
R9697:Pik3c2g UTSW 6 139,967,791 (GRCm38) missense unknown
R9708:Pik3c2g UTSW 6 139,629,867 (GRCm38) missense probably benign
R9717:Pik3c2g UTSW 6 139,896,184 (GRCm38) missense
RF015:Pik3c2g UTSW 6 139,754,771 (GRCm38) missense
RF032:Pik3c2g UTSW 6 139,635,658 (GRCm38) frame shift probably null
X0024:Pik3c2g UTSW 6 139,860,258 (GRCm38) missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- GCTCGTTAGCTATCAGGTGAAC -3'
(R):5'- GACACCTCACATTATGCTAACG -3'

Sequencing Primer
(F):5'- CAGGTGAACTCTGATTATTGCC -3'
(R):5'- GCTAACGATTGATTTCTTTCACCAAC -3'
Posted On 2016-04-27