Incidental Mutation 'R4974:Cfap57'
ID 382472
Institutional Source Beutler Lab
Gene Symbol Cfap57
Ensembl Gene ENSMUSG00000028730
Gene Name cilia and flagella associated protein 57
Synonyms Wdr65, 1110020C03Rik, C130004B06Rik, LOC384050
MMRRC Submission 042569-MU
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # R4974 (G1)
Quality Score 225
Status Validated
Chromosome 4
Chromosomal Location 118554551-118620777 bp(-) (GRCm38)
Type of Mutation missense
DNA Base Change (assembly) G to T at 118593054 bp (GRCm38)
Zygosity Heterozygous
Amino Acid Change Leucine to Methionine at position 624 (L624M)
Ref Sequence ENSEMBL: ENSMUSP00000080592 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000071972] [ENSMUST00000081921]
AlphaFold Q9D180
Predicted Effect probably damaging
Transcript: ENSMUST00000071972
AA Change: L624M

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000071863
Gene: ENSMUSG00000028730
AA Change: L624M

DomainStartEndE-ValueType
Blast:WD40 44 88 3e-12 BLAST
Blast:WD40 95 137 1e-9 BLAST
WD40 140 181 1.77e2 SMART
internal_repeat_1 182 237 7.23e-5 PROSPERO
WD40 329 365 1.27e2 SMART
WD40 376 416 3.4e-2 SMART
WD40 418 456 1.59e1 SMART
Blast:WD40 461 497 4e-18 BLAST
WD40 500 539 9.67e-7 SMART
WD40 544 581 3.96e1 SMART
Blast:WD40 582 621 8e-16 BLAST
WD40 626 665 3.21e-1 SMART
coiled coil region 690 1056 N/A INTRINSIC
coiled coil region 1094 1166 N/A INTRINSIC
coiled coil region 1197 1222 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000081921
AA Change: L624M

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000080592
Gene: ENSMUSG00000028730
AA Change: L624M

DomainStartEndE-ValueType
Blast:WD40 44 88 3e-12 BLAST
Blast:WD40 95 137 1e-9 BLAST
WD40 140 181 1.77e2 SMART
internal_repeat_1 182 237 7.23e-5 PROSPERO
WD40 329 365 1.27e2 SMART
WD40 376 416 3.4e-2 SMART
WD40 418 456 1.59e1 SMART
Blast:WD40 461 497 4e-18 BLAST
WD40 500 539 9.67e-7 SMART
WD40 544 581 3.96e1 SMART
Blast:WD40 582 621 8e-16 BLAST
WD40 626 665 3.21e-1 SMART
coiled coil region 690 1056 N/A INTRINSIC
coiled coil region 1094 1166 N/A INTRINSIC
coiled coil region 1197 1222 N/A INTRINSIC
Meta Mutation Damage Score 0.3843 question?
Coding Region Coverage
  • 1x: 99.1%
  • 3x: 98.4%
  • 10x: 96.8%
  • 20x: 94.2%
Validation Efficiency 97% (94/97)
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This protein encoded by this gene belongs to the WD repeat-containing family of proteins, which function in the formation of protein-protein complexes in a variety of biological pathways. This family member is thought to function in craniofacial development, possibly in the fusion of lip and palate. A missense mutation in this gene is associated with Van der Woude syndrome 2. Alternative splicing of this gene results in multiple transcript variants. [provided by RefSeq, Aug 2011]
Allele List at MGI
Other mutations in this stock
Total: 94 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
9130011E15Rik A T 19: 45,820,287 (GRCm38) F655Y probably damaging Het
A730061H03Rik C T 14: 55,560,117 (GRCm38) probably benign Het
Acsf2 A C 11: 94,569,329 (GRCm38) M399R possibly damaging Het
Adra2c C A 5: 35,280,924 (GRCm38) R347S probably benign Het
Akap9 A G 5: 3,961,466 (GRCm38) K723R possibly damaging Het
Anxa9 A C 3: 95,308,013 (GRCm38) probably benign Het
Aqr T C 2: 114,113,351 (GRCm38) H1102R probably damaging Het
Arrdc2 A G 8: 70,837,518 (GRCm38) V173A probably benign Het
Aspm T C 1: 139,478,010 (GRCm38) V1545A probably benign Het
Bbs5 C T 2: 69,647,234 (GRCm38) probably benign Het
Bnip2 A G 9: 70,003,434 (GRCm38) T255A possibly damaging Het
Cacna1b T C 2: 24,648,523 (GRCm38) T1531A probably damaging Het
Cast T C 13: 74,807,823 (GRCm38) K9R probably benign Het
Cfap46 A T 7: 139,607,188 (GRCm38) probably null Het
Cyp2c39 A T 19: 39,563,879 (GRCm38) M339L probably benign Het
Dcst1 T A 3: 89,357,803 (GRCm38) T247S probably benign Het
Dnajc18 T A 18: 35,683,319 (GRCm38) I189F possibly damaging Het
Eef2kmt T C 16: 5,249,012 (GRCm38) T126A probably benign Het
Epha2 A G 4: 141,321,705 (GRCm38) E624G probably damaging Het
Erbb3 G A 10: 128,572,448 (GRCm38) H866Y probably benign Het
F13a1 C T 13: 36,916,863 (GRCm38) probably null Het
Fgd3 T A 13: 49,278,602 (GRCm38) N392I probably damaging Het
Fgf7 A T 2: 126,088,240 (GRCm38) M98L probably benign Het
G2e3 T A 12: 51,369,139 (GRCm38) S553T probably benign Het
Glipr1 C A 10: 111,993,506 (GRCm38) E117* probably null Het
Gm11060 A T 2: 105,093,783 (GRCm38) probably benign Het
Gm4787 A G 12: 81,377,629 (GRCm38) I585T probably damaging Het
Gm6055 A T 14: 48,079,458 (GRCm38) noncoding transcript Het
Gpbar1 TACCAC TAC 1: 74,279,545 (GRCm38) probably benign Het
Gpt2 T A 8: 85,519,439 (GRCm38) probably benign Het
Gtf2ird1 A T 5: 134,357,831 (GRCm38) Y345* probably null Het
Hmcn1 T A 1: 150,819,449 (GRCm38) T235S probably benign Het
Igkv5-48 A G 6: 69,726,754 (GRCm38) Y56H possibly damaging Het
Il17re C T 6: 113,469,569 (GRCm38) T427I probably benign Het
Itpr3 A T 17: 27,083,608 (GRCm38) D80V probably damaging Het
Kif21a G T 15: 90,949,010 (GRCm38) H1317N probably benign Het
Kif28 T C 1: 179,698,644 (GRCm38) K144E probably damaging Het
Kif4-ps A C 12: 101,147,071 (GRCm38) noncoding transcript Het
Klk11 C T 7: 43,777,736 (GRCm38) T148I probably damaging Het
Klkb1 T A 8: 45,286,958 (GRCm38) H99L probably damaging Het
Kpna6 A C 4: 129,656,405 (GRCm38) probably null Het
Lama3 G T 18: 12,552,826 (GRCm38) K1132N probably damaging Het
Lcp1 T A 14: 75,208,471 (GRCm38) L264* probably null Het
Map2 T C 1: 66,413,505 (GRCm38) V360A probably benign Het
Med13 A T 11: 86,298,847 (GRCm38) S1079T probably damaging Het
Mettl13 A G 1: 162,537,220 (GRCm38) M162T probably damaging Het
Mppe1 T G 18: 67,228,062 (GRCm38) E208A probably benign Het
Msantd2 A C 9: 37,489,379 (GRCm38) K19T possibly damaging Het
Mylk3 A G 8: 85,364,783 (GRCm38) V131A probably damaging Het
Myocd A T 11: 65,183,473 (GRCm38) S609T possibly damaging Het
Ncbp3 G A 11: 73,053,529 (GRCm38) probably null Het
Neb T A 2: 52,246,859 (GRCm38) L3203F probably damaging Het
Notch2 C A 3: 98,139,633 (GRCm38) T1756K probably benign Het
Nphp4 A T 4: 152,537,793 (GRCm38) R544W probably damaging Het
Olfr1179 T G 2: 88,402,412 (GRCm38) H174P probably damaging Het
Olfr368 A T 2: 37,332,566 (GRCm38) D273V probably damaging Het
Olfr402 A T 11: 74,155,919 (GRCm38) Y255F probably benign Het
Parp4 T A 14: 56,589,898 (GRCm38) V163E possibly damaging Het
Pcdhgb1 C A 18: 37,682,372 (GRCm38) Q639K probably benign Het
Pcnx2 A G 8: 125,851,130 (GRCm38) V936A probably benign Het
Pcsk7 T A 9: 45,918,862 (GRCm38) M418K probably damaging Het
Pglyrp4 T C 3: 90,733,007 (GRCm38) I188T probably benign Het
Pgs1 A G 11: 118,005,519 (GRCm38) R339G probably benign Het
Pik3r3 A G 4: 116,286,191 (GRCm38) I294V probably benign Het
Pik3r6 A G 11: 68,539,945 (GRCm38) D520G probably damaging Het
Pkdrej A G 15: 85,820,409 (GRCm38) V442A probably benign Het
Ppfibp1 T A 6: 147,030,419 (GRCm38) probably benign Het
Ppp3ca C A 3: 136,935,049 (GRCm38) Q454K possibly damaging Het
Ppp5c A T 7: 17,009,936 (GRCm38) M191K probably damaging Het
Prl4a1 A T 13: 28,023,325 (GRCm38) Y194F possibly damaging Het
Ptpn21 G T 12: 98,680,103 (GRCm38) T1032K probably damaging Het
Ptprh A T 7: 4,551,007 (GRCm38) probably null Het
Ptprm T A 17: 66,678,067 (GRCm38) R1447S probably benign Het
Pxk T A 14: 8,140,734 (GRCm38) D236E probably damaging Het
Qars T C 9: 108,508,931 (GRCm38) F107S probably damaging Het
Rbbp6 A G 7: 122,999,808 (GRCm38) probably benign Het
Rptor A T 11: 119,821,640 (GRCm38) probably benign Het
Rtn4 T A 11: 29,740,994 (GRCm38) M1095K probably damaging Het
Serpinb3b T A 1: 107,154,715 (GRCm38) H273L probably benign Het
Sgce G A 6: 4,689,630 (GRCm38) T401M probably benign Het
Slc12a6 C T 2: 112,358,525 (GRCm38) R1083W probably damaging Het
Slc45a4 A T 15: 73,584,450 (GRCm38) M635K probably damaging Het
Slc6a1 T A 6: 114,307,701 (GRCm38) V240D probably damaging Het
Snx9 G A 17: 5,902,519 (GRCm38) probably null Het
Spred3 A G 7: 29,167,824 (GRCm38) V49A probably damaging Het
Tars A G 15: 11,390,391 (GRCm38) F334S probably damaging Het
Tdpoz1 A G 3: 93,671,147 (GRCm38) V110A probably benign Het
Tfrc T G 16: 32,618,279 (GRCm38) V252G probably damaging Het
Tm6sf2 T C 8: 70,075,478 (GRCm38) probably benign Het
Txlnb T C 10: 17,838,969 (GRCm38) V383A probably damaging Het
Utp20 C A 10: 88,816,949 (GRCm38) V368L probably benign Het
Vmn2r12 A T 5: 109,091,506 (GRCm38) V397E probably damaging Het
Zdhhc12 G A 2: 30,091,526 (GRCm38) R175W probably damaging Het
Zfyve9 A G 4: 108,680,900 (GRCm38) probably null Het
Other mutations in Cfap57
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00502:Cfap57 APN 4 118,581,001 (GRCm38) missense probably benign 0.01
IGL00508:Cfap57 APN 4 118,581,170 (GRCm38) splice site probably null
IGL00857:Cfap57 APN 4 118,612,923 (GRCm38) critical splice donor site probably null
IGL01147:Cfap57 APN 4 118,589,001 (GRCm38) missense probably damaging 0.97
IGL01396:Cfap57 APN 4 118,610,595 (GRCm38) missense probably damaging 1.00
IGL01420:Cfap57 APN 4 118,612,940 (GRCm38) missense probably benign 0.21
IGL01615:Cfap57 APN 4 118,600,796 (GRCm38) missense probably damaging 1.00
IGL02154:Cfap57 APN 4 118,613,017 (GRCm38) missense probably damaging 1.00
IGL02161:Cfap57 APN 4 118,579,372 (GRCm38) missense possibly damaging 0.75
IGL02481:Cfap57 APN 4 118,581,105 (GRCm38) missense probably damaging 1.00
IGL02483:Cfap57 APN 4 118,581,105 (GRCm38) missense probably damaging 1.00
IGL02503:Cfap57 APN 4 118,569,348 (GRCm38) critical splice donor site probably null
IGL02800:Cfap57 APN 4 118,614,750 (GRCm38) missense probably damaging 1.00
IGL03083:Cfap57 APN 4 118,584,739 (GRCm38) missense probably damaging 0.96
IGL03146:Cfap57 APN 4 118,599,019 (GRCm38) missense probably damaging 1.00
IGL03246:Cfap57 APN 4 118,576,645 (GRCm38) missense probably benign 0.29
IGL03376:Cfap57 APN 4 118,584,720 (GRCm38) missense probably damaging 0.96
G1Funyon:Cfap57 UTSW 4 118,593,074 (GRCm38) missense possibly damaging 0.94
R0144:Cfap57 UTSW 4 118,584,705 (GRCm38) missense probably damaging 1.00
R0184:Cfap57 UTSW 4 118,599,012 (GRCm38) missense probably damaging 1.00
R0415:Cfap57 UTSW 4 118,569,431 (GRCm38) missense possibly damaging 0.89
R0515:Cfap57 UTSW 4 118,620,402 (GRCm38) missense probably damaging 1.00
R0690:Cfap57 UTSW 4 118,569,727 (GRCm38) splice site probably benign
R0730:Cfap57 UTSW 4 118,612,920 (GRCm38) splice site probably null
R0737:Cfap57 UTSW 4 118,581,102 (GRCm38) missense possibly damaging 0.81
R0854:Cfap57 UTSW 4 118,561,872 (GRCm38) missense probably benign 0.04
R0880:Cfap57 UTSW 4 118,581,838 (GRCm38) nonsense probably null
R1085:Cfap57 UTSW 4 118,595,779 (GRCm38) missense probably benign 0.20
R1119:Cfap57 UTSW 4 118,606,676 (GRCm38) nonsense probably null
R1217:Cfap57 UTSW 4 118,606,652 (GRCm38) missense possibly damaging 0.67
R1294:Cfap57 UTSW 4 118,606,534 (GRCm38) critical splice donor site probably null
R1487:Cfap57 UTSW 4 118,614,781 (GRCm38) missense probably benign 0.01
R1676:Cfap57 UTSW 4 118,595,940 (GRCm38) missense probably damaging 1.00
R1688:Cfap57 UTSW 4 118,569,646 (GRCm38) missense probably null 0.20
R1709:Cfap57 UTSW 4 118,571,704 (GRCm38) missense probably benign 0.00
R1719:Cfap57 UTSW 4 118,606,631 (GRCm38) missense probably benign 0.04
R1782:Cfap57 UTSW 4 118,614,975 (GRCm38) missense probably damaging 0.98
R1791:Cfap57 UTSW 4 118,571,724 (GRCm38) missense possibly damaging 0.66
R1850:Cfap57 UTSW 4 118,599,894 (GRCm38) missense probably damaging 1.00
R1866:Cfap57 UTSW 4 118,599,927 (GRCm38) missense possibly damaging 0.49
R1912:Cfap57 UTSW 4 118,615,010 (GRCm38) missense probably damaging 0.96
R1978:Cfap57 UTSW 4 118,593,132 (GRCm38) missense probably benign 0.03
R2177:Cfap57 UTSW 4 118,606,688 (GRCm38) missense probably benign 0.00
R2322:Cfap57 UTSW 4 118,610,725 (GRCm38) missense probably benign
R3905:Cfap57 UTSW 4 118,595,839 (GRCm38) missense probably damaging 1.00
R4013:Cfap57 UTSW 4 118,593,143 (GRCm38) missense probably benign 0.01
R4079:Cfap57 UTSW 4 118,598,997 (GRCm38) missense probably benign 0.34
R4962:Cfap57 UTSW 4 118,613,065 (GRCm38) missense probably benign 0.21
R4970:Cfap57 UTSW 4 118,620,371 (GRCm38) missense probably damaging 0.99
R4999:Cfap57 UTSW 4 118,595,848 (GRCm38) missense probably benign 0.01
R5482:Cfap57 UTSW 4 118,569,641 (GRCm38) missense probably benign
R5522:Cfap57 UTSW 4 118,595,888 (GRCm38) missense probably benign 0.41
R5626:Cfap57 UTSW 4 118,614,783 (GRCm38) missense probably damaging 1.00
R5685:Cfap57 UTSW 4 118,569,459 (GRCm38) missense probably benign
R5712:Cfap57 UTSW 4 118,614,795 (GRCm38) missense probably damaging 1.00
R5961:Cfap57 UTSW 4 118,571,745 (GRCm38) missense probably benign 0.00
R6244:Cfap57 UTSW 4 118,579,410 (GRCm38) missense probably damaging 0.99
R6268:Cfap57 UTSW 4 118,569,451 (GRCm38) nonsense probably null
R6271:Cfap57 UTSW 4 118,595,759 (GRCm38) missense probably benign 0.13
R6330:Cfap57 UTSW 4 118,569,396 (GRCm38) missense probably benign
R6439:Cfap57 UTSW 4 118,588,975 (GRCm38) critical splice donor site probably null
R6639:Cfap57 UTSW 4 118,554,712 (GRCm38) missense probably benign 0.13
R6722:Cfap57 UTSW 4 118,584,717 (GRCm38) missense probably damaging 1.00
R7033:Cfap57 UTSW 4 118,613,126 (GRCm38) missense possibly damaging 0.67
R7143:Cfap57 UTSW 4 118,620,709 (GRCm38) unclassified probably benign
R7162:Cfap57 UTSW 4 118,614,931 (GRCm38) missense probably benign
R7174:Cfap57 UTSW 4 118,589,067 (GRCm38) missense probably benign 0.35
R7210:Cfap57 UTSW 4 118,576,703 (GRCm38) nonsense probably null
R7242:Cfap57 UTSW 4 118,593,096 (GRCm38) missense possibly damaging 0.50
R7244:Cfap57 UTSW 4 118,554,800 (GRCm38) nonsense probably null
R7359:Cfap57 UTSW 4 118,598,965 (GRCm38) missense probably benign 0.01
R7373:Cfap57 UTSW 4 118,614,931 (GRCm38) missense probably benign
R7394:Cfap57 UTSW 4 118,593,137 (GRCm38) missense probably benign 0.00
R7401:Cfap57 UTSW 4 118,614,931 (GRCm38) missense probably benign
R7412:Cfap57 UTSW 4 118,614,931 (GRCm38) missense probably benign
R7414:Cfap57 UTSW 4 118,614,931 (GRCm38) missense probably benign
R7452:Cfap57 UTSW 4 118,595,784 (GRCm38) missense probably damaging 1.00
R7457:Cfap57 UTSW 4 118,589,001 (GRCm38) missense probably damaging 0.97
R7559:Cfap57 UTSW 4 118,614,931 (GRCm38) missense probably benign
R7642:Cfap57 UTSW 4 118,614,931 (GRCm38) missense probably benign
R7741:Cfap57 UTSW 4 118,614,931 (GRCm38) missense probably benign
R7744:Cfap57 UTSW 4 118,614,931 (GRCm38) missense probably benign
R7745:Cfap57 UTSW 4 118,614,931 (GRCm38) missense probably benign
R7842:Cfap57 UTSW 4 118,554,755 (GRCm38) nonsense probably null
R7936:Cfap57 UTSW 4 118,614,931 (GRCm38) missense probably benign
R7940:Cfap57 UTSW 4 118,614,931 (GRCm38) missense probably benign
R7942:Cfap57 UTSW 4 118,614,931 (GRCm38) missense probably benign
R8074:Cfap57 UTSW 4 118,569,625 (GRCm38) missense possibly damaging 0.66
R8301:Cfap57 UTSW 4 118,593,074 (GRCm38) missense possibly damaging 0.94
R8411:Cfap57 UTSW 4 118,614,931 (GRCm38) missense probably benign
R8447:Cfap57 UTSW 4 118,614,931 (GRCm38) missense probably benign
R8491:Cfap57 UTSW 4 118,614,931 (GRCm38) missense probably benign
R8524:Cfap57 UTSW 4 118,614,931 (GRCm38) missense probably benign
R8670:Cfap57 UTSW 4 118,614,925 (GRCm38) missense possibly damaging 0.91
R8707:Cfap57 UTSW 4 118,593,006 (GRCm38) missense probably benign 0.04
R8790:Cfap57 UTSW 4 118,581,914 (GRCm38) missense possibly damaging 0.59
R8941:Cfap57 UTSW 4 118,569,602 (GRCm38) missense probably damaging 0.99
R9139:Cfap57 UTSW 4 118,554,851 (GRCm38) missense probably benign 0.02
R9212:Cfap57 UTSW 4 118,579,452 (GRCm38) missense possibly damaging 0.95
R9442:Cfap57 UTSW 4 118,606,534 (GRCm38) critical splice donor site probably null
R9525:Cfap57 UTSW 4 118,576,581 (GRCm38) missense probably damaging 1.00
X0022:Cfap57 UTSW 4 118,614,745 (GRCm38) missense probably benign
Z1088:Cfap57 UTSW 4 118,581,882 (GRCm38) missense probably benign 0.22
Z1177:Cfap57 UTSW 4 118,598,956 (GRCm38) critical splice donor site probably null
Predicted Primers PCR Primer
(F):5'- CCAGGAATTTCATCATGGGTATGAC -3'
(R):5'- TGGGACACTGGAGACACTGTTC -3'

Sequencing Primer
(F):5'- TTCATCATGGGTATGACTAGCC -3'
(R):5'- ACTGGAGACACTGTTCAGCCC -3'
Posted On 2016-04-27