Incidental Mutation 'R4949:Taar8b'
| ID |
383674 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Taar8b
|
| Ensembl Gene |
ENSMUSG00000100186 |
| Gene Name |
trace amine-associated receptor 8B |
| Synonyms |
LOC382348 |
| MMRRC Submission |
042546-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.146)
|
| Stock # |
R4949 (G1)
|
| Quality Score |
225 |
|
Status
|
Not validated
|
| Chromosome |
10 |
| Chromosomal Location |
23967158-23968192 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
C to T
at 23967825 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Cysteine to Tyrosine
at position 123
(C123Y)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000090324
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000092654]
|
| AlphaFold |
Q5QD06 |
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000092654
AA Change: C123Y
PolyPhen 2
Score 0.995 (Sensitivity: 0.68; Specificity: 0.97)
|
| SMART Domains |
Protein: ENSMUSP00000090324
Gene: ENSMUSG00000100186
AA Change: C123Y
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7TM_GPCR_Srx
|
39 |
244 |
1.4e-8 |
PFAM |
|
Pfam:7TM_GPCR_Srsx
|
42 |
327 |
1.1e-14 |
PFAM |
|
Pfam:7tm_1
|
48 |
312 |
6.4e-57 |
PFAM |
|
| Coding Region Coverage |
- 1x: 99.1%
- 3x: 98.3%
- 10x: 96.1%
- 20x: 91.3%
|
| Validation Efficiency |
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 35 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Acox3 |
T |
C |
5: 35,769,450 (GRCm39) |
V692A |
probably benign |
Het |
| Bcl2l13 |
G |
T |
6: 120,864,191 (GRCm39) |
G382W |
probably damaging |
Het |
| Cdhr5 |
T |
A |
7: 140,852,557 (GRCm39) |
N353I |
probably damaging |
Het |
| Chil4 |
A |
G |
3: 106,113,408 (GRCm39) |
S170P |
possibly damaging |
Het |
| Clp1 |
A |
C |
2: 84,554,086 (GRCm39) |
M361R |
possibly damaging |
Het |
| Cylc2 |
A |
G |
4: 51,229,804 (GRCm39) |
K382R |
unknown |
Het |
| Dsg2 |
T |
A |
18: 20,723,241 (GRCm39) |
D422E |
probably damaging |
Het |
| Dync1h1 |
C |
A |
12: 110,624,560 (GRCm39) |
T3700N |
probably damaging |
Het |
| Gm14295 |
A |
C |
2: 176,501,469 (GRCm39) |
T320P |
probably damaging |
Het |
| Ido2 |
T |
G |
8: 25,023,970 (GRCm39) |
|
probably null |
Het |
| Ift140 |
T |
A |
17: 25,313,639 (GRCm39) |
S1357T |
probably benign |
Het |
| Insr |
T |
G |
8: 3,235,059 (GRCm39) |
E145A |
probably benign |
Het |
| Itpripl1 |
A |
G |
2: 126,983,327 (GRCm39) |
M265T |
probably benign |
Het |
| Kcnb1 |
G |
T |
2: 166,947,521 (GRCm39) |
N442K |
probably damaging |
Het |
| Kifc5b |
C |
A |
17: 27,144,488 (GRCm39) |
R536S |
probably damaging |
Het |
| Klf6 |
A |
T |
13: 5,914,947 (GRCm39) |
S129C |
probably benign |
Het |
| Lpin2 |
C |
G |
17: 71,538,334 (GRCm39) |
P327A |
probably damaging |
Het |
| Lsm1 |
T |
C |
8: 26,292,065 (GRCm39) |
V114A |
probably benign |
Het |
| Map7d1 |
C |
T |
4: 126,128,846 (GRCm39) |
W218* |
probably null |
Het |
| N4bp2 |
T |
A |
5: 65,979,142 (GRCm39) |
|
probably null |
Het |
| Nt5el |
T |
A |
13: 105,246,214 (GRCm39) |
S258R |
probably damaging |
Het |
| Rheb |
A |
T |
5: 25,008,729 (GRCm39) |
I163K |
possibly damaging |
Het |
| Rph3a |
T |
C |
5: 121,101,897 (GRCm39) |
D113G |
probably damaging |
Het |
| Scn8a |
A |
G |
15: 100,927,663 (GRCm39) |
N1381D |
probably damaging |
Het |
| Sdsl |
T |
A |
5: 120,597,870 (GRCm39) |
N208Y |
possibly damaging |
Het |
| Serpinb9e |
A |
G |
13: 33,435,591 (GRCm39) |
N8S |
possibly damaging |
Het |
| Sox18 |
G |
A |
2: 181,313,017 (GRCm39) |
Q100* |
probably null |
Het |
| Tas2r124 |
A |
G |
6: 132,731,858 (GRCm39) |
I56V |
possibly damaging |
Het |
| Tes |
C |
A |
6: 17,100,359 (GRCm39) |
H331N |
probably benign |
Het |
| Tmbim1 |
T |
G |
1: 74,334,524 (GRCm39) |
D12A |
probably damaging |
Het |
| Tmprss4 |
T |
C |
9: 45,086,841 (GRCm39) |
I307V |
possibly damaging |
Het |
| Ttll1 |
A |
T |
15: 83,386,374 (GRCm39) |
M77K |
probably null |
Het |
| Ttpal |
G |
A |
2: 163,455,671 (GRCm39) |
R220Q |
probably damaging |
Het |
| Vmn1r230 |
T |
A |
17: 21,067,625 (GRCm39) |
H271Q |
probably benign |
Het |
| Vmn2r32 |
A |
G |
7: 7,467,083 (GRCm39) |
I815T |
probably benign |
Het |
|
| Other mutations in Taar8b |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00333:Taar8b
|
APN |
10 |
23,967,654 (GRCm39) |
missense |
possibly damaging |
0.69 |
|
IGL01380:Taar8b
|
APN |
10 |
23,968,005 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01536:Taar8b
|
APN |
10 |
23,967,493 (GRCm39) |
missense |
probably benign |
|
|
IGL02192:Taar8b
|
APN |
10 |
23,967,262 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02282:Taar8b
|
APN |
10 |
23,967,453 (GRCm39) |
missense |
possibly damaging |
0.83 |
|
R0730:Taar8b
|
UTSW |
10 |
23,967,924 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1871:Taar8b
|
UTSW |
10 |
23,967,900 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2051:Taar8b
|
UTSW |
10 |
23,967,212 (GRCm39) |
missense |
probably benign |
0.38 |
|
R2265:Taar8b
|
UTSW |
10 |
23,967,270 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R2267:Taar8b
|
UTSW |
10 |
23,967,270 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R2268:Taar8b
|
UTSW |
10 |
23,967,270 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R2269:Taar8b
|
UTSW |
10 |
23,967,270 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R4598:Taar8b
|
UTSW |
10 |
23,967,736 (GRCm39) |
missense |
probably benign |
|
|
R4633:Taar8b
|
UTSW |
10 |
23,968,150 (GRCm39) |
nonsense |
probably null |
|
|
R4833:Taar8b
|
UTSW |
10 |
23,968,030 (GRCm39) |
missense |
possibly damaging |
0.77 |
|
R6104:Taar8b
|
UTSW |
10 |
23,968,135 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6178:Taar8b
|
UTSW |
10 |
23,967,711 (GRCm39) |
missense |
probably benign |
0.01 |
|
R6495:Taar8b
|
UTSW |
10 |
23,967,160 (GRCm39) |
makesense |
probably null |
|
|
R6816:Taar8b
|
UTSW |
10 |
23,968,079 (GRCm39) |
missense |
probably benign |
0.00 |
|
R6913:Taar8b
|
UTSW |
10 |
23,967,963 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R7072:Taar8b
|
UTSW |
10 |
23,967,876 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R7691:Taar8b
|
UTSW |
10 |
23,967,436 (GRCm39) |
nonsense |
probably null |
|
|
R8082:Taar8b
|
UTSW |
10 |
23,967,789 (GRCm39) |
missense |
possibly damaging |
0.93 |
|
R9023:Taar8b
|
UTSW |
10 |
23,967,205 (GRCm39) |
missense |
probably benign |
|
|
| Predicted Primers |
PCR Primer
(F):5'- AGCACTTACTAAGCTTTCAATCCC -3'
(R):5'- ACCTCCTGGTGGTGATTTCAG -3'
Sequencing Primer
(F):5'- TCAATCCCCTTAGCACTGATG -3'
(R):5'- AGTTCTCCATTTCAAGCAGCTG -3'
|
| Posted On |
2016-04-27 |
Incidental Mutation