Incidental Mutation 'R4965:Cux1'
ID |
383895 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Cux1
|
Ensembl Gene |
ENSMUSG00000029705 |
Gene Name |
cut-like homeobox 1 |
Synonyms |
CDP, Cutl1, Cux, Cux-1 |
Accession Numbers |
|
Essential gene? |
Probably essential
(E-score: 0.892)
|
Stock # |
R4965 (G1)
|
Quality Score |
225 |
Status
|
Not validated
|
Chromosome |
5 |
Chromosomal Location |
136276989-136596344 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to T
at 136340410 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Asparagine to Lysine
at position 625
(N625K)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000135892
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000004097]
[ENSMUST00000175918]
[ENSMUST00000175975]
[ENSMUST00000175998]
[ENSMUST00000176172]
[ENSMUST00000176216]
[ENSMUST00000176778]
[ENSMUST00000176423]
[ENSMUST00000176745]
[ENSMUST00000177297]
|
AlphaFold |
no structure available at present |
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000004097
AA Change: N542K
PolyPhen 2
Score 0.768 (Sensitivity: 0.85; Specificity: 0.92)
|
SMART Domains |
Protein: ENSMUSP00000004097 Gene: ENSMUSG00000029705 AA Change: N542K
Domain | Start | End | E-Value | Type |
coiled coil region
|
16 |
45 |
N/A |
INTRINSIC |
coiled coil region
|
110 |
365 |
N/A |
INTRINSIC |
low complexity region
|
425 |
436 |
N/A |
INTRINSIC |
CUT
|
452 |
538 |
5.06e-39 |
SMART |
low complexity region
|
602 |
608 |
N/A |
INTRINSIC |
low complexity region
|
620 |
642 |
N/A |
INTRINSIC |
CUT
|
841 |
929 |
3.31e-43 |
SMART |
low complexity region
|
956 |
972 |
N/A |
INTRINSIC |
low complexity region
|
990 |
1011 |
N/A |
INTRINSIC |
CUT
|
1024 |
1110 |
3.78e-38 |
SMART |
HOX
|
1150 |
1212 |
6.32e-15 |
SMART |
low complexity region
|
1224 |
1239 |
N/A |
INTRINSIC |
low complexity region
|
1317 |
1379 |
N/A |
INTRINSIC |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000148082
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000175918
|
SMART Domains |
Protein: ENSMUSP00000135606 Gene: ENSMUSG00000029705
Domain | Start | End | E-Value | Type |
coiled coil region
|
73 |
328 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000175975
|
SMART Domains |
Protein: ENSMUSP00000135223 Gene: ENSMUSG00000029705
Domain | Start | End | E-Value | Type |
coiled coil region
|
1 |
169 |
N/A |
INTRINSIC |
low complexity region
|
235 |
251 |
N/A |
INTRINSIC |
low complexity region
|
277 |
289 |
N/A |
INTRINSIC |
low complexity region
|
331 |
342 |
N/A |
INTRINSIC |
CUT
|
358 |
444 |
5.06e-39 |
SMART |
low complexity region
|
508 |
514 |
N/A |
INTRINSIC |
low complexity region
|
526 |
548 |
N/A |
INTRINSIC |
CUT
|
747 |
835 |
3.31e-43 |
SMART |
low complexity region
|
862 |
878 |
N/A |
INTRINSIC |
low complexity region
|
896 |
917 |
N/A |
INTRINSIC |
CUT
|
930 |
1016 |
3.78e-38 |
SMART |
HOX
|
1056 |
1118 |
6.32e-15 |
SMART |
low complexity region
|
1130 |
1145 |
N/A |
INTRINSIC |
low complexity region
|
1223 |
1285 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000175998
|
SMART Domains |
Protein: ENSMUSP00000135816 Gene: ENSMUSG00000029705
Domain | Start | End | E-Value | Type |
coiled coil region
|
1 |
39 |
N/A |
INTRINSIC |
low complexity region
|
52 |
64 |
N/A |
INTRINSIC |
coiled coil region
|
76 |
148 |
N/A |
INTRINSIC |
Pfam:CASP_C
|
204 |
430 |
8.6e-72 |
PFAM |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000176172
AA Change: N633K
PolyPhen 2
Score 0.009 (Sensitivity: 0.96; Specificity: 0.77)
|
SMART Domains |
Protein: ENSMUSP00000135086 Gene: ENSMUSG00000029705 AA Change: N633K
Domain | Start | End | E-Value | Type |
coiled coil region
|
99 |
354 |
N/A |
INTRINSIC |
low complexity region
|
420 |
436 |
N/A |
INTRINSIC |
low complexity region
|
462 |
474 |
N/A |
INTRINSIC |
low complexity region
|
516 |
527 |
N/A |
INTRINSIC |
CUT
|
543 |
629 |
5.06e-39 |
SMART |
low complexity region
|
693 |
699 |
N/A |
INTRINSIC |
low complexity region
|
711 |
733 |
N/A |
INTRINSIC |
CUT
|
932 |
1020 |
3.31e-43 |
SMART |
low complexity region
|
1047 |
1063 |
N/A |
INTRINSIC |
low complexity region
|
1081 |
1102 |
N/A |
INTRINSIC |
CUT
|
1115 |
1201 |
3.78e-38 |
SMART |
HOX
|
1241 |
1303 |
6.32e-15 |
SMART |
low complexity region
|
1315 |
1330 |
N/A |
INTRINSIC |
low complexity region
|
1408 |
1470 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000176216
|
SMART Domains |
Protein: ENSMUSP00000135054 Gene: ENSMUSG00000029705
Domain | Start | End | E-Value | Type |
coiled coil region
|
16 |
45 |
N/A |
INTRINSIC |
coiled coil region
|
110 |
365 |
N/A |
INTRINSIC |
internal_repeat_1
|
369 |
390 |
9.35e-5 |
PROSPERO |
Pfam:CASP_C
|
421 |
647 |
1.2e-71 |
PFAM |
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000176778
AA Change: N625K
PolyPhen 2
Score 0.768 (Sensitivity: 0.85; Specificity: 0.92)
|
SMART Domains |
Protein: ENSMUSP00000135892 Gene: ENSMUSG00000029705 AA Change: N625K
Domain | Start | End | E-Value | Type |
low complexity region
|
78 |
86 |
N/A |
INTRINSIC |
coiled coil region
|
195 |
448 |
N/A |
INTRINSIC |
low complexity region
|
508 |
519 |
N/A |
INTRINSIC |
CUT
|
535 |
621 |
5.06e-39 |
SMART |
low complexity region
|
685 |
691 |
N/A |
INTRINSIC |
low complexity region
|
703 |
725 |
N/A |
INTRINSIC |
CUT
|
924 |
1012 |
3.31e-43 |
SMART |
low complexity region
|
1039 |
1055 |
N/A |
INTRINSIC |
low complexity region
|
1073 |
1094 |
N/A |
INTRINSIC |
CUT
|
1107 |
1193 |
3.78e-38 |
SMART |
HOX
|
1233 |
1295 |
6.32e-15 |
SMART |
low complexity region
|
1307 |
1322 |
N/A |
INTRINSIC |
low complexity region
|
1400 |
1462 |
N/A |
INTRINSIC |
|
Predicted Effect |
unknown
Transcript: ENSMUST00000176486
AA Change: N504K
|
SMART Domains |
Protein: ENSMUSP00000135370 Gene: ENSMUSG00000029705 AA Change: N504K
Domain | Start | End | E-Value | Type |
coiled coil region
|
16 |
45 |
N/A |
INTRINSIC |
coiled coil region
|
110 |
363 |
N/A |
INTRINSIC |
low complexity region
|
429 |
445 |
N/A |
INTRINSIC |
low complexity region
|
471 |
483 |
N/A |
INTRINSIC |
low complexity region
|
525 |
536 |
N/A |
INTRINSIC |
CUT
|
552 |
638 |
5.06e-39 |
SMART |
Blast:CUT
|
641 |
840 |
3e-50 |
BLAST |
CUT
|
919 |
1007 |
3.31e-43 |
SMART |
low complexity region
|
1034 |
1050 |
N/A |
INTRINSIC |
low complexity region
|
1068 |
1089 |
N/A |
INTRINSIC |
CUT
|
1102 |
1188 |
3.78e-38 |
SMART |
HOX
|
1228 |
1290 |
6.32e-15 |
SMART |
low complexity region
|
1302 |
1317 |
N/A |
INTRINSIC |
low complexity region
|
1395 |
1457 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000176423
|
SMART Domains |
Protein: ENSMUSP00000135036 Gene: ENSMUSG00000029705
Domain | Start | End | E-Value | Type |
coiled coil region
|
1 |
39 |
N/A |
INTRINSIC |
low complexity region
|
52 |
64 |
N/A |
INTRINSIC |
coiled coil region
|
76 |
148 |
N/A |
INTRINSIC |
low complexity region
|
217 |
226 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000176745
|
SMART Domains |
Protein: ENSMUSP00000135512 Gene: ENSMUSG00000029705
Domain | Start | End | E-Value | Type |
coiled coil region
|
16 |
45 |
N/A |
INTRINSIC |
coiled coil region
|
110 |
363 |
N/A |
INTRINSIC |
internal_repeat_1
|
367 |
388 |
8.95e-5 |
PROSPERO |
Pfam:CASP_C
|
419 |
645 |
1.2e-71 |
PFAM |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000177297
|
SMART Domains |
Protein: ENSMUSP00000134819 Gene: ENSMUSG00000029705
Domain | Start | End | E-Value | Type |
coiled coil region
|
16 |
45 |
N/A |
INTRINSIC |
coiled coil region
|
110 |
365 |
N/A |
INTRINSIC |
internal_repeat_1
|
369 |
390 |
8.99e-6 |
PROSPERO |
Pfam:CASP_C
|
422 |
527 |
1.8e-17 |
PFAM |
|
Coding Region Coverage |
- 1x: 99.0%
- 3x: 98.2%
- 10x: 95.7%
- 20x: 90.1%
|
Validation Efficiency |
|
MGI Phenotype |
PHENOTYPE: Homozygotes for a targeted null mutation exhibit delayed lung development and neonatal mortality. Survivors show growth retardation and hair defects. Homozygotes for a partially deleted protein have curly hair, and females tend to lose their litters. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 117 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
1110002E22Rik |
A |
G |
3: 137,775,433 (GRCm39) |
T1541A |
probably benign |
Het |
9530002B09Rik |
T |
C |
4: 122,594,285 (GRCm39) |
M59T |
probably benign |
Het |
Adam18 |
C |
T |
8: 25,131,827 (GRCm39) |
C428Y |
probably damaging |
Het |
Adcy5 |
A |
G |
16: 35,098,872 (GRCm39) |
E700G |
possibly damaging |
Het |
Adprh |
G |
T |
16: 38,266,142 (GRCm39) |
Y333* |
probably null |
Het |
Agfg2 |
C |
A |
5: 137,665,439 (GRCm39) |
|
probably null |
Het |
Akip1 |
A |
T |
7: 109,310,961 (GRCm39) |
E167V |
probably damaging |
Het |
Akr1c21 |
A |
T |
13: 4,630,304 (GRCm39) |
Q199L |
probably damaging |
Het |
Aldh9a1 |
C |
A |
1: 167,193,358 (GRCm39) |
A455E |
probably damaging |
Het |
Amph |
G |
A |
13: 19,321,869 (GRCm39) |
S520N |
probably benign |
Het |
Ankrd52 |
A |
G |
10: 128,226,376 (GRCm39) |
D1006G |
probably benign |
Het |
Ap5z1 |
A |
C |
5: 142,453,431 (GRCm39) |
Q133P |
probably damaging |
Het |
Babam1 |
C |
T |
8: 71,857,032 (GRCm39) |
A331V |
possibly damaging |
Het |
Btc |
T |
C |
5: 91,510,160 (GRCm39) |
|
probably null |
Het |
Cacna2d3 |
A |
G |
14: 28,704,289 (GRCm39) |
F831L |
probably benign |
Het |
Cadm3 |
G |
A |
1: 173,164,664 (GRCm39) |
P372L |
probably damaging |
Het |
Capn5 |
A |
T |
7: 97,775,624 (GRCm39) |
M439K |
probably damaging |
Het |
Carf |
T |
C |
1: 60,189,796 (GRCm39) |
S639P |
probably damaging |
Het |
Casp12 |
C |
T |
9: 5,352,250 (GRCm39) |
R81C |
probably benign |
Het |
Ces2e |
G |
T |
8: 105,660,330 (GRCm39) |
R555M |
probably benign |
Het |
Cfap54 |
T |
A |
10: 92,902,661 (GRCm39) |
I164F |
probably benign |
Het |
Cltc |
C |
T |
11: 86,598,327 (GRCm39) |
V1012I |
probably damaging |
Het |
Cmya5 |
G |
A |
13: 93,232,295 (GRCm39) |
T931I |
possibly damaging |
Het |
Cntn6 |
A |
G |
6: 104,751,435 (GRCm39) |
I364V |
probably damaging |
Het |
Cntnap1 |
A |
T |
11: 101,068,251 (GRCm39) |
I59F |
possibly damaging |
Het |
Cop1 |
T |
C |
1: 159,067,167 (GRCm39) |
M80T |
probably damaging |
Het |
Cplx2 |
A |
G |
13: 54,527,460 (GRCm39) |
S115G |
possibly damaging |
Het |
Crtac1 |
A |
G |
19: 42,307,179 (GRCm39) |
Y195H |
probably damaging |
Het |
Csn1s2a |
A |
C |
5: 87,929,697 (GRCm39) |
S99R |
possibly damaging |
Het |
Csn1s2b |
T |
A |
5: 87,961,820 (GRCm39) |
D41E |
possibly damaging |
Het |
Cul9 |
C |
T |
17: 46,849,451 (GRCm39) |
D565N |
probably damaging |
Het |
Cyp2c37 |
A |
T |
19: 40,000,206 (GRCm39) |
M443L |
possibly damaging |
Het |
Cyp2s1 |
G |
A |
7: 25,508,710 (GRCm39) |
T244I |
possibly damaging |
Het |
Dgkh |
C |
T |
14: 78,861,861 (GRCm39) |
V135M |
probably damaging |
Het |
Dtl |
T |
C |
1: 191,278,677 (GRCm39) |
E395G |
possibly damaging |
Het |
Dyrk1a |
G |
T |
16: 94,492,854 (GRCm39) |
G658* |
probably null |
Het |
Erlin2 |
T |
C |
8: 27,519,623 (GRCm39) |
F117S |
probably damaging |
Het |
Fkbp8 |
A |
G |
8: 70,984,173 (GRCm39) |
|
probably null |
Het |
Fras1 |
T |
C |
5: 96,874,439 (GRCm39) |
F2288S |
possibly damaging |
Het |
Frmd3 |
A |
G |
4: 74,071,837 (GRCm39) |
T240A |
probably damaging |
Het |
H2-D1 |
A |
G |
17: 35,482,881 (GRCm39) |
Y137C |
probably damaging |
Het |
Helz2 |
A |
G |
2: 180,882,709 (GRCm39) |
V28A |
possibly damaging |
Het |
Hydin |
A |
G |
8: 111,124,727 (GRCm39) |
I579V |
probably benign |
Het |
Il6 |
A |
T |
5: 30,218,491 (GRCm39) |
Y29F |
possibly damaging |
Het |
Ildr2 |
A |
G |
1: 166,135,409 (GRCm39) |
D368G |
probably damaging |
Het |
Junb |
T |
A |
8: 85,704,788 (GRCm39) |
I91F |
probably damaging |
Het |
Kat2a |
C |
A |
11: 100,603,029 (GRCm39) |
|
probably benign |
Het |
Kat2a |
A |
T |
11: 100,603,030 (GRCm39) |
|
probably benign |
Het |
Kcnh5 |
T |
A |
12: 75,011,925 (GRCm39) |
T665S |
probably benign |
Het |
Kdm1b |
A |
T |
13: 47,227,843 (GRCm39) |
D608V |
probably damaging |
Het |
Krcc1 |
A |
G |
6: 71,261,621 (GRCm39) |
K218E |
probably damaging |
Het |
Krt8 |
C |
T |
15: 101,905,386 (GRCm39) |
V488M |
probably benign |
Het |
Lzts1 |
C |
T |
8: 69,591,414 (GRCm39) |
A245T |
probably benign |
Het |
Mcm6 |
T |
A |
1: 128,287,223 (GRCm39) |
Q27L |
probably damaging |
Het |
Mfsd4b3-ps |
G |
T |
10: 39,823,686 (GRCm39) |
Y191* |
probably null |
Het |
Mgme1 |
C |
T |
2: 144,118,324 (GRCm39) |
Q199* |
probably null |
Het |
Mgme1 |
T |
C |
2: 144,121,540 (GRCm39) |
L332P |
probably benign |
Het |
Morc3 |
G |
T |
16: 93,657,475 (GRCm39) |
E25* |
probably null |
Het |
Mroh7 |
G |
A |
4: 106,548,184 (GRCm39) |
A1098V |
possibly damaging |
Het |
Mtrf1 |
G |
A |
14: 79,644,027 (GRCm39) |
R174H |
probably benign |
Het |
Mybpc3 |
G |
A |
2: 90,949,592 (GRCm39) |
G45D |
possibly damaging |
Het |
Mycbpap |
A |
T |
11: 94,395,764 (GRCm39) |
N733K |
probably damaging |
Het |
N4bp1 |
T |
C |
8: 87,578,314 (GRCm39) |
I684V |
possibly damaging |
Het |
Nav2 |
A |
T |
7: 49,202,625 (GRCm39) |
R1470* |
probably null |
Het |
Ndufa9 |
A |
T |
6: 126,799,026 (GRCm39) |
S364T |
probably benign |
Het |
Nipal4 |
C |
A |
11: 46,052,837 (GRCm39) |
A43S |
possibly damaging |
Het |
Nlrp1a |
T |
A |
11: 70,983,141 (GRCm39) |
Y1275F |
possibly damaging |
Het |
Nova1 |
A |
T |
12: 46,767,618 (GRCm39) |
L8* |
probably null |
Het |
Odam |
G |
T |
5: 88,037,967 (GRCm39) |
G181* |
probably null |
Het |
Optn |
T |
A |
2: 5,026,190 (GRCm39) |
Q576L |
probably benign |
Het |
Or2c1 |
T |
C |
16: 3,657,434 (GRCm39) |
L199P |
probably damaging |
Het |
Or4k47 |
T |
C |
2: 111,451,879 (GRCm39) |
D180G |
probably damaging |
Het |
Or4l1 |
C |
T |
14: 50,166,354 (GRCm39) |
V216I |
probably benign |
Het |
Or51a39 |
A |
T |
7: 102,362,702 (GRCm39) |
I306N |
probably damaging |
Het |
Or5as1 |
T |
A |
2: 86,981,003 (GRCm39) |
M1L |
possibly damaging |
Het |
Or5h18 |
A |
T |
16: 58,847,696 (GRCm39) |
D191E |
probably damaging |
Het |
Or8s2 |
T |
C |
15: 98,277,030 (GRCm39) |
|
probably benign |
Het |
Patl2 |
G |
T |
2: 121,959,329 (GRCm39) |
S45* |
probably null |
Het |
Pde2a |
G |
A |
7: 101,152,140 (GRCm39) |
G349E |
probably benign |
Het |
Pdlim2 |
T |
A |
14: 70,405,464 (GRCm39) |
|
probably benign |
Het |
Per1 |
T |
C |
11: 68,995,227 (GRCm39) |
V653A |
probably benign |
Het |
Phlda2 |
A |
G |
7: 143,056,005 (GRCm39) |
S75P |
probably damaging |
Het |
Poldip3 |
A |
T |
15: 83,021,706 (GRCm39) |
M167K |
possibly damaging |
Het |
Potegl |
C |
A |
2: 23,135,127 (GRCm39) |
T312K |
probably benign |
Het |
Prpf38a |
T |
C |
4: 108,436,278 (GRCm39) |
I12V |
probably benign |
Het |
Prrc1 |
G |
A |
18: 57,507,622 (GRCm39) |
V259I |
possibly damaging |
Het |
Ptges3l |
A |
T |
11: 101,315,448 (GRCm39) |
M1K |
probably null |
Het |
Rdh5 |
A |
G |
10: 128,749,653 (GRCm39) |
Y296H |
probably damaging |
Het |
Resf1 |
G |
T |
6: 149,229,896 (GRCm39) |
G981* |
probably null |
Het |
Rnf2 |
T |
A |
1: 151,348,968 (GRCm39) |
K51* |
probably null |
Het |
Rpusd3 |
C |
A |
6: 113,393,809 (GRCm39) |
R215L |
probably benign |
Het |
Rsph4a |
A |
T |
10: 33,785,236 (GRCm39) |
E382D |
probably damaging |
Het |
S1pr2 |
G |
A |
9: 20,879,745 (GRCm39) |
Q28* |
probably null |
Het |
Sesn1 |
A |
T |
10: 41,771,005 (GRCm39) |
I179F |
probably damaging |
Het |
Setd3 |
T |
A |
12: 108,079,630 (GRCm39) |
E291V |
probably benign |
Het |
Shc1 |
G |
T |
3: 89,334,303 (GRCm39) |
R323L |
probably damaging |
Het |
Slc22a5 |
T |
C |
11: 53,782,352 (GRCm39) |
D5G |
possibly damaging |
Het |
Slc6a19 |
T |
C |
13: 73,848,677 (GRCm39) |
K26E |
probably benign |
Het |
Slc9a3 |
A |
G |
13: 74,312,412 (GRCm39) |
N670D |
possibly damaging |
Het |
Spata19 |
A |
T |
9: 27,311,761 (GRCm39) |
I127L |
probably benign |
Het |
Speg |
G |
T |
1: 75,404,347 (GRCm39) |
V2751L |
probably damaging |
Het |
Sptbn2 |
A |
G |
19: 4,779,337 (GRCm39) |
D298G |
probably benign |
Het |
Srm |
T |
C |
4: 148,678,640 (GRCm39) |
V289A |
possibly damaging |
Het |
Stip1 |
C |
T |
19: 7,012,938 (GRCm39) |
A49T |
probably benign |
Het |
Tas2r118 |
C |
A |
6: 23,969,627 (GRCm39) |
V145F |
probably benign |
Het |
Tbc1d12 |
A |
T |
19: 38,854,169 (GRCm39) |
K284* |
probably null |
Het |
Tfcp2 |
T |
C |
15: 100,423,531 (GRCm39) |
H125R |
probably damaging |
Het |
Tfdp1 |
T |
C |
8: 13,423,073 (GRCm39) |
V206A |
probably damaging |
Het |
Tgtp2 |
A |
G |
11: 48,950,237 (GRCm39) |
W112R |
probably damaging |
Het |
Tmem71 |
T |
G |
15: 66,410,710 (GRCm39) |
M221L |
probably benign |
Het |
Tpcn1 |
T |
C |
5: 120,685,552 (GRCm39) |
N436S |
possibly damaging |
Het |
Usp4 |
C |
T |
9: 108,239,819 (GRCm39) |
L183F |
probably damaging |
Het |
Vmn2r55 |
A |
T |
7: 12,404,478 (GRCm39) |
N308K |
possibly damaging |
Het |
Zfp106 |
T |
A |
2: 120,364,400 (GRCm39) |
D669V |
probably damaging |
Het |
Zfp108 |
A |
T |
7: 23,959,573 (GRCm39) |
I55L |
probably benign |
Het |
Zfp512b |
A |
T |
2: 181,228,131 (GRCm39) |
S8R |
probably damaging |
Het |
Zfp827 |
T |
C |
8: 79,787,910 (GRCm39) |
S359P |
probably benign |
Het |
|
Other mutations in Cux1 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00846:Cux1
|
APN |
5 |
136,355,650 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL00966:Cux1
|
APN |
5 |
136,340,345 (GRCm39) |
intron |
probably benign |
|
IGL01129:Cux1
|
APN |
5 |
136,333,572 (GRCm39) |
intron |
probably benign |
|
IGL01885:Cux1
|
APN |
5 |
136,337,301 (GRCm39) |
missense |
possibly damaging |
0.90 |
IGL01947:Cux1
|
APN |
5 |
136,303,979 (GRCm39) |
missense |
probably benign |
0.04 |
IGL02259:Cux1
|
APN |
5 |
136,355,687 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02666:Cux1
|
APN |
5 |
136,304,169 (GRCm39) |
nonsense |
probably null |
|
IGL02826:Cux1
|
APN |
5 |
136,336,857 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03014:Cux1
|
UTSW |
5 |
136,594,379 (GRCm39) |
intron |
probably benign |
|
R0047:Cux1
|
UTSW |
5 |
136,392,107 (GRCm39) |
splice site |
probably benign |
|
R0047:Cux1
|
UTSW |
5 |
136,392,107 (GRCm39) |
splice site |
probably benign |
|
R0057:Cux1
|
UTSW |
5 |
136,285,136 (GRCm39) |
missense |
probably damaging |
1.00 |
R0149:Cux1
|
UTSW |
5 |
136,308,351 (GRCm39) |
missense |
probably damaging |
1.00 |
R0295:Cux1
|
UTSW |
5 |
136,342,066 (GRCm39) |
missense |
probably benign |
0.04 |
R0361:Cux1
|
UTSW |
5 |
136,308,351 (GRCm39) |
missense |
probably damaging |
1.00 |
R0533:Cux1
|
UTSW |
5 |
136,336,713 (GRCm39) |
missense |
probably damaging |
1.00 |
R0630:Cux1
|
UTSW |
5 |
136,315,689 (GRCm39) |
missense |
probably damaging |
1.00 |
R0801:Cux1
|
UTSW |
5 |
136,355,783 (GRCm39) |
missense |
probably damaging |
0.97 |
R0884:Cux1
|
UTSW |
5 |
136,336,689 (GRCm39) |
missense |
probably damaging |
1.00 |
R0976:Cux1
|
UTSW |
5 |
136,342,144 (GRCm39) |
missense |
probably damaging |
1.00 |
R1073:Cux1
|
UTSW |
5 |
136,281,395 (GRCm39) |
critical splice donor site |
probably null |
|
R1222:Cux1
|
UTSW |
5 |
136,304,003 (GRCm39) |
missense |
probably benign |
0.18 |
R1518:Cux1
|
UTSW |
5 |
136,337,133 (GRCm39) |
missense |
probably benign |
0.29 |
R1686:Cux1
|
UTSW |
5 |
136,304,235 (GRCm39) |
nonsense |
probably null |
|
R1687:Cux1
|
UTSW |
5 |
136,341,523 (GRCm39) |
missense |
probably damaging |
1.00 |
R1758:Cux1
|
UTSW |
5 |
136,421,176 (GRCm39) |
missense |
probably damaging |
1.00 |
R1797:Cux1
|
UTSW |
5 |
136,304,169 (GRCm39) |
missense |
probably benign |
0.22 |
R1919:Cux1
|
UTSW |
5 |
136,392,173 (GRCm39) |
nonsense |
probably null |
|
R2051:Cux1
|
UTSW |
5 |
136,361,512 (GRCm39) |
missense |
probably damaging |
1.00 |
R2339:Cux1
|
UTSW |
5 |
136,315,862 (GRCm39) |
missense |
probably damaging |
1.00 |
R3438:Cux1
|
UTSW |
5 |
136,340,414 (GRCm39) |
missense |
probably damaging |
0.97 |
R3713:Cux1
|
UTSW |
5 |
136,594,397 (GRCm39) |
intron |
probably benign |
|
R3800:Cux1
|
UTSW |
5 |
136,344,887 (GRCm39) |
missense |
probably damaging |
1.00 |
R3964:Cux1
|
UTSW |
5 |
136,311,796 (GRCm39) |
missense |
probably damaging |
1.00 |
R4135:Cux1
|
UTSW |
5 |
136,336,750 (GRCm39) |
missense |
probably damaging |
1.00 |
R4198:Cux1
|
UTSW |
5 |
136,315,702 (GRCm39) |
missense |
probably damaging |
1.00 |
R4467:Cux1
|
UTSW |
5 |
136,341,576 (GRCm39) |
missense |
probably damaging |
1.00 |
R4498:Cux1
|
UTSW |
5 |
136,341,847 (GRCm39) |
missense |
probably damaging |
1.00 |
R4622:Cux1
|
UTSW |
5 |
136,337,154 (GRCm39) |
missense |
probably damaging |
0.99 |
R4623:Cux1
|
UTSW |
5 |
136,337,154 (GRCm39) |
missense |
probably damaging |
0.99 |
R4651:Cux1
|
UTSW |
5 |
136,596,083 (GRCm39) |
missense |
probably damaging |
1.00 |
R4652:Cux1
|
UTSW |
5 |
136,596,083 (GRCm39) |
missense |
probably damaging |
1.00 |
R4658:Cux1
|
UTSW |
5 |
136,279,448 (GRCm39) |
missense |
possibly damaging |
0.80 |
R4665:Cux1
|
UTSW |
5 |
136,315,653 (GRCm39) |
missense |
probably damaging |
1.00 |
R4704:Cux1
|
UTSW |
5 |
136,278,055 (GRCm39) |
missense |
probably benign |
0.01 |
R4867:Cux1
|
UTSW |
5 |
136,303,815 (GRCm39) |
intron |
probably benign |
|
R5090:Cux1
|
UTSW |
5 |
136,342,054 (GRCm39) |
missense |
possibly damaging |
0.95 |
R5155:Cux1
|
UTSW |
5 |
136,594,295 (GRCm39) |
intron |
probably benign |
|
R5226:Cux1
|
UTSW |
5 |
136,399,027 (GRCm39) |
missense |
probably benign |
0.01 |
R5252:Cux1
|
UTSW |
5 |
136,337,151 (GRCm39) |
missense |
probably damaging |
0.98 |
R5266:Cux1
|
UTSW |
5 |
136,341,548 (GRCm39) |
missense |
probably damaging |
1.00 |
R5399:Cux1
|
UTSW |
5 |
136,281,458 (GRCm39) |
missense |
possibly damaging |
0.58 |
R5509:Cux1
|
UTSW |
5 |
136,304,171 (GRCm39) |
missense |
probably benign |
0.13 |
R5609:Cux1
|
UTSW |
5 |
136,421,174 (GRCm39) |
missense |
probably damaging |
1.00 |
R5681:Cux1
|
UTSW |
5 |
136,337,038 (GRCm39) |
missense |
probably damaging |
1.00 |
R5993:Cux1
|
UTSW |
5 |
136,392,125 (GRCm39) |
missense |
probably benign |
0.00 |
R6049:Cux1
|
UTSW |
5 |
136,361,564 (GRCm39) |
missense |
probably damaging |
1.00 |
R6290:Cux1
|
UTSW |
5 |
136,340,412 (GRCm39) |
missense |
probably damaging |
0.99 |
R6310:Cux1
|
UTSW |
5 |
136,304,018 (GRCm39) |
missense |
probably benign |
0.10 |
R6351:Cux1
|
UTSW |
5 |
136,338,646 (GRCm39) |
missense |
probably damaging |
1.00 |
R6531:Cux1
|
UTSW |
5 |
136,303,973 (GRCm39) |
missense |
probably benign |
0.03 |
R6590:Cux1
|
UTSW |
5 |
136,368,971 (GRCm39) |
missense |
probably damaging |
0.99 |
R6663:Cux1
|
UTSW |
5 |
136,514,701 (GRCm39) |
missense |
probably damaging |
1.00 |
R6690:Cux1
|
UTSW |
5 |
136,368,971 (GRCm39) |
missense |
probably damaging |
0.99 |
R6777:Cux1
|
UTSW |
5 |
136,594,422 (GRCm39) |
intron |
probably benign |
|
R6786:Cux1
|
UTSW |
5 |
136,596,085 (GRCm39) |
missense |
probably damaging |
1.00 |
R6817:Cux1
|
UTSW |
5 |
136,402,027 (GRCm39) |
splice site |
probably null |
|
R6989:Cux1
|
UTSW |
5 |
136,308,502 (GRCm39) |
nonsense |
probably null |
|
R7011:Cux1
|
UTSW |
5 |
136,388,887 (GRCm39) |
missense |
probably damaging |
1.00 |
R7167:Cux1
|
UTSW |
5 |
136,338,895 (GRCm39) |
splice site |
probably null |
|
R7699:Cux1
|
UTSW |
5 |
136,514,593 (GRCm39) |
critical splice donor site |
probably null |
|
R7861:Cux1
|
UTSW |
5 |
136,281,458 (GRCm39) |
missense |
possibly damaging |
0.58 |
R7876:Cux1
|
UTSW |
5 |
136,392,161 (GRCm39) |
missense |
probably benign |
0.00 |
R7916:Cux1
|
UTSW |
5 |
136,311,815 (GRCm39) |
missense |
probably damaging |
1.00 |
R8023:Cux1
|
UTSW |
5 |
136,402,251 (GRCm39) |
missense |
probably damaging |
0.99 |
R8154:Cux1
|
UTSW |
5 |
136,281,434 (GRCm39) |
missense |
probably damaging |
1.00 |
R8267:Cux1
|
UTSW |
5 |
136,311,853 (GRCm39) |
missense |
probably damaging |
1.00 |
R8289:Cux1
|
UTSW |
5 |
136,337,358 (GRCm39) |
missense |
probably damaging |
0.99 |
R8305:Cux1
|
UTSW |
5 |
136,388,863 (GRCm39) |
missense |
probably benign |
0.02 |
R8319:Cux1
|
UTSW |
5 |
136,594,251 (GRCm39) |
missense |
probably benign |
0.02 |
R8405:Cux1
|
UTSW |
5 |
136,304,241 (GRCm39) |
missense |
possibly damaging |
0.83 |
R8483:Cux1
|
UTSW |
5 |
136,303,944 (GRCm39) |
missense |
possibly damaging |
0.83 |
R8506:Cux1
|
UTSW |
5 |
136,337,358 (GRCm39) |
missense |
probably damaging |
0.99 |
R8671:Cux1
|
UTSW |
5 |
136,279,454 (GRCm39) |
missense |
probably damaging |
1.00 |
R8680:Cux1
|
UTSW |
5 |
136,336,710 (GRCm39) |
missense |
possibly damaging |
0.46 |
R8737:Cux1
|
UTSW |
5 |
136,311,796 (GRCm39) |
missense |
probably damaging |
1.00 |
R8738:Cux1
|
UTSW |
5 |
136,402,220 (GRCm39) |
missense |
probably damaging |
1.00 |
R8793:Cux1
|
UTSW |
5 |
136,594,539 (GRCm39) |
missense |
unknown |
|
R8897:Cux1
|
UTSW |
5 |
136,315,623 (GRCm39) |
missense |
probably damaging |
1.00 |
R8926:Cux1
|
UTSW |
5 |
136,338,404 (GRCm39) |
intron |
probably benign |
|
R8954:Cux1
|
UTSW |
5 |
136,402,203 (GRCm39) |
nonsense |
probably null |
|
R9092:Cux1
|
UTSW |
5 |
136,514,671 (GRCm39) |
missense |
probably damaging |
1.00 |
R9205:Cux1
|
UTSW |
5 |
136,398,989 (GRCm39) |
missense |
probably damaging |
1.00 |
R9550:Cux1
|
UTSW |
5 |
136,340,387 (GRCm39) |
missense |
probably damaging |
0.99 |
R9578:Cux1
|
UTSW |
5 |
136,282,919 (GRCm39) |
critical splice donor site |
probably null |
|
R9682:Cux1
|
UTSW |
5 |
136,337,116 (GRCm39) |
missense |
probably benign |
|
R9701:Cux1
|
UTSW |
5 |
136,343,169 (GRCm39) |
missense |
probably damaging |
0.97 |
R9712:Cux1
|
UTSW |
5 |
136,338,673 (GRCm39) |
missense |
probably benign |
0.35 |
|
Predicted Primers |
PCR Primer
(F):5'- GCCTTTGAACCCGTGCTTTG -3'
(R):5'- TCCTCCTACAGTAGACCCAGTG -3'
Sequencing Primer
(F):5'- GTTTTTCACACCAGGTTCCAGG -3'
(R):5'- CCCAGTGCCTGTAAGAAGGTTCTAG -3'
|
Posted On |
2016-04-27 |