Incidental Mutation 'IGL00579:Slc35b2'
| ID |
3845 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Slc35b2
|
| Ensembl Gene |
ENSMUSG00000037089 |
| Gene Name |
solute carrier family 35, member B2 |
| Synonyms |
PAPST1, 1110003M08Rik |
| Accession Numbers |
|
| Essential gene? |
Possibly non essential
(E-score: 0.463)
|
| Stock # |
IGL00579
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
17 |
| Chromosomal Location |
45874844-45878597 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
G to T
at 45875886 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Valine to Leucine
at position 81
(V81L)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000153497
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000024739]
[ENSMUST00000024742]
[ENSMUST00000041353]
[ENSMUST00000165127]
[ENSMUST00000166469]
[ENSMUST00000223987]
[ENSMUST00000224905]
[ENSMUST00000226086]
|
| AlphaFold |
Q91ZN5 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000024739
|
| SMART Domains |
Protein: ENSMUSP00000024739
Gene: ENSMUSG00000023944
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
3 |
13 |
N/A |
INTRINSIC |
|
HATPase_c
|
35 |
189 |
3.82e-10 |
SMART |
|
Pfam:HSP90
|
191 |
719 |
5.4e-246 |
PFAM |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000024742
|
| SMART Domains |
Protein: ENSMUSP00000024742
Gene: ENSMUSG00000023947
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
36 |
48 |
N/A |
INTRINSIC |
|
low complexity region
|
93 |
110 |
N/A |
INTRINSIC |
|
ANK
|
122 |
152 |
1.14e2 |
SMART |
|
ANK
|
157 |
187 |
2.15e0 |
SMART |
|
ANK
|
190 |
219 |
6.81e-3 |
SMART |
|
ANK
|
233 |
262 |
5.09e-2 |
SMART |
|
ANK
|
267 |
296 |
1.12e-3 |
SMART |
|
ANK
|
300 |
329 |
1e0 |
SMART |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000041353
AA Change: V32L
PolyPhen 2
Score 0.050 (Sensitivity: 0.94; Specificity: 0.83)
|
| SMART Domains |
Protein: ENSMUSP00000037834
Gene: ENSMUSG00000037089
AA Change: V32L
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:UAA
|
62 |
363 |
5.1e-79 |
PFAM |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000145205
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000165127
|
| SMART Domains |
Protein: ENSMUSP00000126239
Gene: ENSMUSG00000023944
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
3 |
13 |
N/A |
INTRINSIC |
|
Pfam:HSP90
|
37 |
161 |
3.8e-60 |
PFAM |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000166469
|
| SMART Domains |
Protein: ENSMUSP00000127338
Gene: ENSMUSG00000023944
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:HSP90
|
4 |
189 |
1.3e-92 |
PFAM |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000223987
AA Change: V32L
PolyPhen 2
Score 0.050 (Sensitivity: 0.94; Specificity: 0.83)
|
| Predicted Effect |
unknown
Transcript: ENSMUST00000224341
AA Change: V24L
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000224905
AA Change: V81L
PolyPhen 2
Score 0.050 (Sensitivity: 0.94; Specificity: 0.83)
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000226086
AA Change: V81L
PolyPhen 2
Score 0.991 (Sensitivity: 0.71; Specificity: 0.97)
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000224559
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000225226
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] Sulfotransferases (e.g., SULT4A1; MIM 608359) use an activated form of sulfate, 3-prime-phosphoadenosine 5-prime-phosphosulfate (PAPS), as a common sulfate donor for sulfation of glycoproteins, proteoglycans, and glycolipids in the endoplasmic reticulum and Golgi apparatus. SLC35B2 is located in the microsomal membrane and transports PAPS from the cytosol, where it is synthesized, into the Golgi lumen (Kamiyama et al., 2003 [PubMed 12716889]).[supplied by OMIM, Mar 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 27 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Abcf2 |
T |
C |
5: 24,773,794 (GRCm39) |
E365G |
possibly damaging |
Het |
| Adamts12 |
T |
C |
15: 11,152,100 (GRCm39) |
Y197H |
probably benign |
Het |
| Cept1 |
A |
T |
3: 106,413,119 (GRCm39) |
V202E |
possibly damaging |
Het |
| Cfap53 |
A |
T |
18: 74,438,611 (GRCm39) |
K263* |
probably null |
Het |
| Dennd3 |
T |
C |
15: 73,412,691 (GRCm39) |
I451T |
possibly damaging |
Het |
| Dync2h1 |
A |
C |
9: 7,035,728 (GRCm39) |
|
probably benign |
Het |
| Egf |
T |
A |
3: 129,491,447 (GRCm39) |
H850L |
probably benign |
Het |
| Gm11595 |
T |
C |
11: 99,662,868 (GRCm39) |
T271A |
unknown |
Het |
| Gorab |
T |
C |
1: 163,222,256 (GRCm39) |
E142G |
probably damaging |
Het |
| Gpat4 |
A |
G |
8: 23,672,791 (GRCm39) |
S20P |
probably damaging |
Het |
| Gpr83 |
T |
C |
9: 14,771,897 (GRCm39) |
V23A |
probably benign |
Het |
| Il13ra2 |
A |
G |
X: 146,177,386 (GRCm39) |
Y146H |
probably damaging |
Het |
| Kcnj16 |
C |
T |
11: 110,916,034 (GRCm39) |
T232M |
probably benign |
Het |
| Mdfic |
A |
T |
6: 15,741,073 (GRCm39) |
I61F |
possibly damaging |
Het |
| Mmp3 |
G |
T |
9: 7,445,894 (GRCm39) |
|
probably benign |
Het |
| Olr1 |
C |
T |
6: 129,470,486 (GRCm39) |
R227K |
probably benign |
Het |
| Otof |
T |
A |
5: 30,556,666 (GRCm39) |
I257F |
possibly damaging |
Het |
| Oxsr1 |
T |
A |
9: 119,088,277 (GRCm39) |
R43S |
probably damaging |
Het |
| Pacc1 |
T |
C |
1: 191,060,405 (GRCm39) |
V21A |
unknown |
Het |
| Prkdc |
A |
G |
16: 15,482,103 (GRCm39) |
D382G |
probably damaging |
Het |
| Thumpd3 |
G |
A |
6: 113,024,622 (GRCm39) |
R72H |
possibly damaging |
Het |
| Tsga10 |
G |
A |
1: 37,874,534 (GRCm39) |
T117I |
probably damaging |
Het |
| Vps13a |
T |
A |
19: 16,684,726 (GRCm39) |
T953S |
probably benign |
Het |
| Wdr62 |
A |
C |
7: 29,967,320 (GRCm39) |
C311W |
probably damaging |
Het |
| Wdr74 |
A |
G |
19: 8,716,830 (GRCm39) |
T247A |
possibly damaging |
Het |
| Zbtb26 |
A |
T |
2: 37,326,454 (GRCm39) |
V194D |
possibly damaging |
Het |
| Zfp639 |
A |
T |
3: 32,574,626 (GRCm39) |
E417V |
probably damaging |
Het |
|
| Other mutations in Slc35b2 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL02749:Slc35b2
|
APN |
17 |
45,877,493 (GRCm39) |
missense |
probably benign |
0.14 |
|
IGL02951:Slc35b2
|
APN |
17 |
45,875,694 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL03382:Slc35b2
|
APN |
17 |
45,877,571 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R0020:Slc35b2
|
UTSW |
17 |
45,877,782 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0368:Slc35b2
|
UTSW |
17 |
45,877,389 (GRCm39) |
missense |
probably benign |
|
|
R0743:Slc35b2
|
UTSW |
17 |
45,877,751 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0884:Slc35b2
|
UTSW |
17 |
45,877,751 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2293:Slc35b2
|
UTSW |
17 |
45,878,067 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R3894:Slc35b2
|
UTSW |
17 |
45,877,368 (GRCm39) |
missense |
probably benign |
0.01 |
|
R4372:Slc35b2
|
UTSW |
17 |
45,877,355 (GRCm39) |
missense |
probably benign |
0.34 |
|
R4415:Slc35b2
|
UTSW |
17 |
45,877,355 (GRCm39) |
missense |
probably benign |
0.34 |
|
R4416:Slc35b2
|
UTSW |
17 |
45,877,355 (GRCm39) |
missense |
probably benign |
0.34 |
|
R4417:Slc35b2
|
UTSW |
17 |
45,877,355 (GRCm39) |
missense |
probably benign |
0.34 |
|
R5291:Slc35b2
|
UTSW |
17 |
45,877,424 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5314:Slc35b2
|
UTSW |
17 |
45,877,424 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5929:Slc35b2
|
UTSW |
17 |
45,877,587 (GRCm39) |
missense |
probably benign |
0.35 |
|
R6178:Slc35b2
|
UTSW |
17 |
45,877,302 (GRCm39) |
missense |
probably benign |
0.10 |
|
R7217:Slc35b2
|
UTSW |
17 |
45,875,955 (GRCm39) |
missense |
probably benign |
0.19 |
|
R7561:Slc35b2
|
UTSW |
17 |
45,877,727 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8823:Slc35b2
|
UTSW |
17 |
45,877,894 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8956:Slc35b2
|
UTSW |
17 |
45,877,673 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R9401:Slc35b2
|
UTSW |
17 |
45,877,910 (GRCm39) |
missense |
probably benign |
0.00 |
|
| Posted On |
2012-04-20 |
Incidental Mutation