Mutagenetix > Incidental Mutation

Incidental Mutation 'R4972:Fcrl5'

384501

Institutional Source

Beutler Lab

Gene Symbol

Fcrl5

Ensembl Gene

ENSMUSG00000048031

Gene Name

Fc receptor-like 5

Synonyms

BXMAS1-like protein 2, Fcrh3, mBXMH2

MMRRC Submission

042567-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.057) question?

Stock #

R4972 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

87435773-87500678 bp(+) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 87454650 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Methionine to Valine at position 407 (M407V)

Ref Sequence

ENSEMBL: ENSMUSP00000141311 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000049926] [ENSMUST00000166297] [ENSMUST00000178261] [ENSMUST00000193229] [ENSMUST00000194102]

AlphaFold

Q68SN8

Predicted Effect

probably benign
Transcript: ENSMUST00000049926
AA Change: M495V

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)

SMART Domains

Protein: ENSMUSP00000050151
Gene: ENSMUSG00000048031
AA Change: M495V

Domain	Start	End	E-Value	Type
signal peptide	1	26	N/A	INTRINSIC
IG	40	113	2.08e-1	SMART
IGc2	128	188	6.16e-4	SMART
IG_like	213	296	4.41e1	SMART
IGc2	316	380	3.97e-7	SMART
IG_like	410	473	2.94e-1	SMART
transmembrane domain	495	517	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000166297
AA Change: M407V

PolyPhen 2 Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)

SMART Domains

Protein: ENSMUSP00000131176
Gene: ENSMUSG00000048031
AA Change: M407V

Domain	Start	End	E-Value	Type
signal peptide	1	26	N/A	INTRINSIC
IGc2	40	100	6.16e-4	SMART
IG_like	125	208	4.41e1	SMART
IGc2	228	292	3.97e-7	SMART
IG_like	322	385	2.94e-1	SMART
transmembrane domain	407	429	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000178261
AA Change: M495V

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)

SMART Domains

Protein: ENSMUSP00000136046
Gene: ENSMUSG00000048031
AA Change: M495V

Domain	Start	End	E-Value	Type
signal peptide	1	30	N/A	INTRINSIC
IG	40	113	2.08e-1	SMART
IGc2	128	188	6.16e-4	SMART
IG_like	213	296	4.41e1	SMART
IGc2	316	380	3.97e-7	SMART
IG_like	410	473	2.94e-1	SMART
transmembrane domain	495	517	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000193229
AA Change: M407V

PolyPhen 2 Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)

SMART Domains

Protein: ENSMUSP00000141311
Gene: ENSMUSG00000048031
AA Change: M407V

Domain	Start	End	E-Value	Type
signal peptide	1	26	N/A	INTRINSIC
IGc2	40	100	6.16e-4	SMART
IG_like	125	208	4.41e1	SMART
IGc2	228	292	3.97e-7	SMART
IG_like	322	385	2.94e-1	SMART
transmembrane domain	407	429	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000194102
AA Change: M495V

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)

SMART Domains

Protein: ENSMUSP00000142210
Gene: ENSMUSG00000048031
AA Change: M495V

Domain	Start	End	E-Value	Type
signal peptide	1	26	N/A	INTRINSIC
IG	40	113	2.08e-1	SMART
IGc2	128	188	6.16e-4	SMART
IG_like	213	296	4.41e1	SMART
IGc2	316	380	3.97e-7	SMART
IG_like	410	473	2.94e-1	SMART
transmembrane domain	495	517	N/A	INTRINSIC

Meta Mutation Damage Score

0.0898

Coding Region Coverage

1x: 99.1%
3x: 98.2%
10x: 96.0%
20x: 91.2%

Validation Efficiency

93% (82/88)

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the immunoglobulin receptor superfamily and the Fc-receptor like family. This gene and several other Fc receptor-like gene members are clustered on the long arm of chromosome 1. The encoded protein is a single-pass type I membrane protein and contains 8 immunoglobulin-like C2-type domains. This gene is implicated in B cell development and lymphomagenesis. Alternatively spliced transcript variants encoding different isoforms have been identified. [provided by RefSeq, Sep 2010]

Allele List at MGI

Other mutations in this stock

Total: 72 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
3425401B19Rik	A	T	14: 32,661,404	I868N	possibly damaging	Het
A730013G03Rik	C	G	1: 192,833,773		noncoding transcript	Het
Actl11	A	G	9: 107,929,956	T493A	probably benign	Het
Actn1	T	C	12: 80,173,039	D686G	probably benign	Het
Adamts1	G	A	16: 85,795,945	T525I	probably damaging	Het
Adcy10	T	A	1: 165,556,862	L1064H	probably damaging	Het
AI661453	A	T	17: 47,466,399		probably benign	Het
Apba1	T	A	19: 23,912,536	S433T	probably benign	Het
Arid4b	T	A	13: 14,160,272	N355K	probably benign	Het
Bsn	A	T	9: 108,115,178	M1125K	probably damaging	Het
C2cd5	A	T	6: 143,013,224	M1003K	probably damaging	Het
Ccdc18	A	G	5: 108,192,003	M805V	probably benign	Het
Cep89	T	G	7: 35,432,552	L637R	probably damaging	Het
Col24a1	A	T	3: 145,509,684	I1444F	probably benign	Het
Commd4	A	T	9: 57,155,448	S175T	probably benign	Het
Coq7	A	G	7: 118,510,117	V236A	unknown	Het
Dctn2	C	T	10: 127,276,703	R176C	probably damaging	Het
Ddx31	T	C	2: 28,860,770	F389L	probably damaging	Het
Dgkz	C	T	2: 91,945,702	R72H	probably benign	Het
Dpysl4	A	G	7: 139,090,290	D24G	probably damaging	Het
Dydc1	A	G	14: 41,082,338	T106A	probably benign	Het
F13b	A	G	1: 139,510,923	Y355C	probably damaging	Het
Fzd5	C	A	1: 64,736,012	V197L	probably benign	Het
Galnt16	G	T	12: 80,572,329	E70*	probably null	Het
Gm8979	T	C	7: 106,083,314		noncoding transcript	Het
Gpr171	A	T	3: 59,097,965	F130I	probably damaging	Het
Grin3a	T	C	4: 49,770,484	N763D	probably damaging	Het
Gsta2	A	T	9: 78,337,679	M51K	probably damaging	Het
Hacd3	A	T	9: 64,990,436	I298N	probably damaging	Het
Il18r1	C	T	1: 40,491,064	P317L	probably benign	Het
Iscu	T	A	5: 113,776,976		probably benign	Het
Kif6	A	G	17: 49,707,619	D250G	probably damaging	Het
Klk14	G	A	7: 43,692,077	C51Y	probably damaging	Het
Lcn6	T	A	2: 25,680,067	C82S	probably damaging	Het
Mob4	C	G	1: 55,151,002	L135V	possibly damaging	Het
Mpzl3	T	A	9: 45,062,256		probably benign	Het
Mvp	T	C	7: 126,989,798	D599G	probably damaging	Het
Myo1a	T	C	10: 127,716,309	Y766H	probably benign	Het
Myo5b	A	G	18: 74,627,193	H260R	probably damaging	Het
Nbea	C	T	3: 56,085,246	R313H	probably damaging	Het
Necab1	T	A	4: 14,978,216	D211V	probably damaging	Het
Nefl	G	T	14: 68,086,763		probably benign	Het
Nfx1	T	A	4: 40,976,375	D16E	probably benign	Het
Nlrp9a	G	T	7: 26,570,539	C797F	probably damaging	Het
Olfr1280	T	A	2: 111,315,818	V113E	probably damaging	Het
Olfr467	A	G	7: 107,814,746	Q56R	probably benign	Het
Pde6b	A	G	5: 108,425,264	D500G	probably benign	Het
Pgs1	T	C	11: 118,005,893		probably null	Het
Polr3b	T	A	10: 84,638,124	I189N	probably damaging	Het
Ppwd1	A	T	13: 104,220,108	S300T	probably benign	Het
Prl2c2	A	C	13: 13,002,170	N55K	possibly damaging	Het
Prpf19	C	T	19: 10,899,345		probably benign	Het
Prph2	G	T	17: 46,910,807	L37F	possibly damaging	Het
Ptprg	G	T	14: 12,226,427	R565L	possibly damaging	Het
Rab8a	C	T	8: 72,171,275	T74M	probably damaging	Het
Rexo1	A	T	10: 80,549,693	F510L	probably damaging	Het
Rexo2	G	T	9: 48,479,389	T51K	probably damaging	Het
Sh3d21	T	C	4: 126,152,416	K147R	possibly damaging	Het
Skint6	A	G	4: 112,835,068	I1062T	probably benign	Het
Spag16	C	T	1: 70,724,928	R636W	probably damaging	Het
Spata16	T	C	3: 26,840,723	I307T	possibly damaging	Het
Speer4f2	T	G	5: 17,374,425	I74S	probably benign	Het
Svep1	T	A	4: 58,087,778	Y1767F	possibly damaging	Het
Swt1	T	C	1: 151,423,542	S7G	probably benign	Het
Tex9	A	G	9: 72,478,338		probably null	Het
Thsd7b	C	A	1: 130,188,572	P1354H	probably damaging	Het
Ticrr	A	G	7: 79,669,668	D467G	probably damaging	Het
Tmco5b	A	C	2: 113,296,993	D303A	probably damaging	Het
Trpm7	A	G	2: 126,824,058	V876A	probably damaging	Het
Ttc21a	G	A	9: 119,944,961	E245K	probably benign	Het
Vezt	C	T	10: 94,000,350		probably null	Het
Zscan20	G	A	4: 128,592,359	P183S	probably benign	Het

Other mutations in Fcrl5

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01743:Fcrl5	APN	3	87444291	missense	probably damaging	0.96
IGL01868:Fcrl5	APN	3	87443707	missense	possibly damaging	0.58
IGL01939:Fcrl5	APN	3	87446299	missense	probably damaging	0.99
IGL02817:Fcrl5	APN	3	87435913	missense	probably benign	0.35
IGL03106:Fcrl5	APN	3	87435883	splice site	probably null
R0381:Fcrl5	UTSW	3	87446460	missense	probably damaging	1.00
R0523:Fcrl5	UTSW	3	87457792	missense	possibly damaging	0.72
R0646:Fcrl5	UTSW	3	87442013	missense	probably benign	0.00
R1231:Fcrl5	UTSW	3	87442179	missense	probably benign	0.13
R1353:Fcrl5	UTSW	3	87448362	missense	probably damaging	1.00
R1711:Fcrl5	UTSW	3	87457414	missense	possibly damaging	0.61
R1714:Fcrl5	UTSW	3	87446406	missense	probably damaging	1.00
R1719:Fcrl5	UTSW	3	87457397	missense	probably damaging	0.98
R2084:Fcrl5	UTSW	3	87444230	missense	probably benign	0.24
R2358:Fcrl5	UTSW	3	87446419	missense	probably damaging	0.99
R2884:Fcrl5	UTSW	3	87457391	missense	probably damaging	1.00
R2885:Fcrl5	UTSW	3	87457391	missense	probably damaging	1.00
R3085:Fcrl5	UTSW	3	87446464	missense	probably damaging	1.00
R3153:Fcrl5	UTSW	3	87443680	missense	probably benign	0.09
R4288:Fcrl5	UTSW	3	87442224	missense	probably benign	0.09
R4289:Fcrl5	UTSW	3	87442224	missense	probably benign	0.09
R4614:Fcrl5	UTSW	3	87448426	missense	probably damaging	1.00
R4719:Fcrl5	UTSW	3	87444189	missense	probably damaging	1.00
R4788:Fcrl5	UTSW	3	87457188	missense	probably damaging	1.00
R4920:Fcrl5	UTSW	3	87444173	missense	probably damaging	1.00
R5373:Fcrl5	UTSW	3	87446391	missense	probably benign	0.01
R5374:Fcrl5	UTSW	3	87446391	missense	probably benign	0.01
R5963:Fcrl5	UTSW	3	87444173	missense	probably damaging	1.00
R5975:Fcrl5	UTSW	3	87442103	missense	probably benign	0.00
R6022:Fcrl5	UTSW	3	87455763	missense	probably benign	0.42
R6267:Fcrl5	UTSW	3	87448324	missense	probably damaging	1.00
R6372:Fcrl5	UTSW	3	87444194	nonsense	probably null
R6393:Fcrl5	UTSW	3	87448327	missense	probably damaging	1.00
R7088:Fcrl5	UTSW	3	87457834	makesense	probably null
R7175:Fcrl5	UTSW	3	87446338	missense	probably benign	0.37
R7210:Fcrl5	UTSW	3	87446412	missense	possibly damaging	0.85
R7217:Fcrl5	UTSW	3	87443774	missense	probably damaging	1.00
R7243:Fcrl5	UTSW	3	87442245	missense	probably benign
R7776:Fcrl5	UTSW	3	87444195	missense	possibly damaging	0.84
R7813:Fcrl5	UTSW	3	87443623	missense	probably benign	0.09
R8357:Fcrl5	UTSW	3	87444260	missense	probably damaging	0.99
R8457:Fcrl5	UTSW	3	87444260	missense	probably damaging	0.99
R9257:Fcrl5	UTSW	3	87435888	missense	probably benign	0.11
R9276:Fcrl5	UTSW	3	87435831	start gained	probably benign
R9748:Fcrl5	UTSW	3	87457162	missense	possibly damaging	0.93
X0054:Fcrl5	UTSW	3	87446299	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- CTAAGGCTTGGTACTCCTGGTC -3'
(R):5'- AACAGGACTTCTGAGGGACC -3'

Sequencing Primer
(F):5'- GGTACTCCTGGTCACAAAGGTTC -3'
(R):5'- ACTTCTGAGGGACCCAGAG -3'

Posted On

2016-04-27