Incidental Mutation 'R4985:Vmn1r204'
ID 385850
Institutional Source Beutler Lab
Gene Symbol Vmn1r204
Ensembl Gene ENSMUSG00000094637
Gene Name vomeronasal 1 receptor 204
Synonyms Gm11301
MMRRC Submission 042579-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.074) question?
Stock # R4985 (G1)
Quality Score 225
Status Validated
Chromosome 13
Chromosomal Location 22740371-22741279 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to A at 22741230 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Valine to Aspartic acid at position 287 (V287D)
Ref Sequence ENSEMBL: ENSMUSP00000154519 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000091728] [ENSMUST00000228195]
AlphaFold I7HIK1
Predicted Effect probably damaging
Transcript: ENSMUST00000091728
AA Change: V287D

PolyPhen 2 Score 0.997 (Sensitivity: 0.41; Specificity: 0.98)
SMART Domains Protein: ENSMUSP00000089321
Gene: ENSMUSG00000094637
AA Change: V287D

DomainStartEndE-ValueType
Pfam:TAS2R 3 293 8.4e-8 PFAM
Pfam:V1R 35 297 1.2e-40 PFAM
Predicted Effect probably damaging
Transcript: ENSMUST00000228195
AA Change: V287D

PolyPhen 2 Score 0.997 (Sensitivity: 0.41; Specificity: 0.98)
Meta Mutation Damage Score 0.6467 question?
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.6%
  • 10x: 97.1%
  • 20x: 94.6%
Validation Efficiency 100% (52/52)
Allele List at MGI
Other mutations in this stock
Total: 50 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4921508M14Rik A T 12: 34,924,457 (GRCm39) probably benign Het
Actn4 A G 7: 28,618,411 (GRCm39) L83P probably damaging Het
Adgb T C 10: 10,276,376 (GRCm39) R331G possibly damaging Het
Bmal1 T C 7: 112,884,280 (GRCm39) V106A probably damaging Het
Brf1 G T 12: 112,932,990 (GRCm39) probably null Het
Cd248 C T 19: 5,119,820 (GRCm39) T556I probably damaging Het
Cdkn2aip G T 8: 48,166,480 (GRCm39) probably benign Het
Ces1d T C 8: 93,901,772 (GRCm39) E399G possibly damaging Het
Col9a3 G A 2: 180,245,193 (GRCm39) R134H unknown Het
Ddb2 T C 2: 91,042,643 (GRCm39) probably null Het
Dlg1 A G 16: 31,606,953 (GRCm39) probably null Het
Dnah1 T G 14: 31,008,855 (GRCm39) E1973A probably null Het
Dync1h1 C A 12: 110,624,560 (GRCm39) T3700N probably damaging Het
E130308A19Rik A G 4: 59,691,017 (GRCm39) T284A probably benign Het
Ecm1 C T 3: 95,643,415 (GRCm39) R295H possibly damaging Het
Efcab5 T A 11: 77,029,055 (GRCm39) H92L probably damaging Het
Egfr C A 11: 16,809,029 (GRCm39) Y74* probably null Het
Fbxo10 T C 4: 45,040,692 (GRCm39) I838V probably benign Het
Gfod2 C T 8: 106,454,643 (GRCm39) R79Q probably damaging Het
Gm11568 C A 11: 99,749,274 (GRCm39) P160T unknown Het
Gm29106 A T 1: 118,126,950 (GRCm39) D214V probably benign Het
Htr3b C A 9: 48,847,241 (GRCm39) V425F possibly damaging Het
Krt86 A T 15: 101,375,146 (GRCm39) E347V probably damaging Het
Lamc2 T C 1: 153,012,551 (GRCm39) I708V probably benign Het
Ldb2 T A 5: 44,637,645 (GRCm39) K221I probably damaging Het
Lmntd2 A C 7: 140,793,190 (GRCm39) S127R probably benign Het
Lrba A G 3: 86,234,743 (GRCm39) probably null Het
Mettl26 T A 17: 26,095,750 (GRCm39) *202R probably null Het
Mmp24 A G 2: 155,656,016 (GRCm39) K485E probably damaging Het
Nap1l1 T C 10: 111,325,944 (GRCm39) C88R probably benign Het
Or2d2 C A 7: 106,728,234 (GRCm39) R122L probably damaging Het
Or8b49 T A 9: 38,505,658 (GRCm39) I47N possibly damaging Het
Pafah1b1 T G 11: 74,576,814 (GRCm39) D159A probably damaging Het
Pcdhga7 T C 18: 37,848,698 (GRCm39) V235A probably benign Het
Pcf11 T C 7: 92,311,110 (GRCm39) T293A probably benign Het
Pidd1 A C 7: 141,018,504 (GRCm39) *916E probably null Het
Pip4k2c T C 10: 127,035,244 (GRCm39) I375V probably benign Het
Pou3f2 A T 4: 22,487,588 (GRCm39) S182T probably benign Het
Rin3 A T 12: 102,334,821 (GRCm39) D164V unknown Het
Rnf8 T C 17: 29,845,834 (GRCm39) S199P possibly damaging Het
Serpina6 A G 12: 103,620,195 (GRCm39) S185P probably benign Het
Slc47a2 C A 11: 61,193,059 (GRCm39) V565L probably benign Het
Slfn4 T A 11: 83,078,033 (GRCm39) F274I probably damaging Het
Tgif1 T C 17: 71,151,867 (GRCm39) Y248C probably benign Het
Tlx1 C A 19: 45,139,421 (GRCm39) Q23K possibly damaging Het
Trpv4 T C 5: 114,760,793 (GRCm39) D846G probably benign Het
Tspyl1 G A 10: 34,158,334 (GRCm39) D20N probably benign Het
Vmn1r159 A T 7: 22,542,959 (GRCm39) F24L probably damaging Het
Zdhhc18 A G 4: 133,340,228 (GRCm39) probably null Het
Zfp276 T G 8: 123,994,646 (GRCm39) V571G probably damaging Het
Other mutations in Vmn1r204
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00819:Vmn1r204 APN 13 22,741,117 (GRCm39) nonsense probably null
IGL01349:Vmn1r204 APN 13 22,740,504 (GRCm39) missense probably damaging 0.99
IGL02653:Vmn1r204 APN 13 22,740,800 (GRCm39) missense probably benign 0.34
R0029:Vmn1r204 UTSW 13 22,740,588 (GRCm39) missense probably benign 0.12
R0078:Vmn1r204 UTSW 13 22,740,379 (GRCm39) missense probably benign 0.01
R0562:Vmn1r204 UTSW 13 22,740,848 (GRCm39) missense probably benign 0.00
R1124:Vmn1r204 UTSW 13 22,741,209 (GRCm39) missense possibly damaging 0.76
R1521:Vmn1r204 UTSW 13 22,741,248 (GRCm39) missense probably benign 0.30
R1544:Vmn1r204 UTSW 13 22,740,465 (GRCm39) missense probably benign 0.13
R2238:Vmn1r204 UTSW 13 22,740,993 (GRCm39) missense probably benign 0.01
R2418:Vmn1r204 UTSW 13 22,740,420 (GRCm39) missense probably damaging 1.00
R2419:Vmn1r204 UTSW 13 22,740,420 (GRCm39) missense probably damaging 1.00
R3944:Vmn1r204 UTSW 13 22,741,014 (GRCm39) missense probably benign 0.02
R4675:Vmn1r204 UTSW 13 22,740,962 (GRCm39) missense probably damaging 1.00
R4782:Vmn1r204 UTSW 13 22,740,867 (GRCm39) missense probably benign 0.03
R5219:Vmn1r204 UTSW 13 22,741,069 (GRCm39) missense probably damaging 1.00
R5268:Vmn1r204 UTSW 13 22,740,912 (GRCm39) missense probably damaging 1.00
R6652:Vmn1r204 UTSW 13 22,740,573 (GRCm39) missense probably damaging 0.99
R6943:Vmn1r204 UTSW 13 22,740,474 (GRCm39) missense probably benign 0.00
R7264:Vmn1r204 UTSW 13 22,741,167 (GRCm39) missense probably benign 0.23
R7299:Vmn1r204 UTSW 13 22,740,975 (GRCm39) missense probably damaging 1.00
R7301:Vmn1r204 UTSW 13 22,740,975 (GRCm39) missense probably damaging 1.00
R7593:Vmn1r204 UTSW 13 22,740,754 (GRCm39) nonsense probably null
R7872:Vmn1r204 UTSW 13 22,740,404 (GRCm39) missense probably benign 0.00
R8495:Vmn1r204 UTSW 13 22,740,879 (GRCm39) missense probably damaging 1.00
R9110:Vmn1r204 UTSW 13 22,740,564 (GRCm39) missense possibly damaging 0.80
Predicted Primers PCR Primer
(F):5'- TGCCAGGCCAGAAATCAGAG -3'
(R):5'- TCTAGGACAGGCTGTCTGAG -3'

Sequencing Primer
(F):5'- TCAGAGCTACACAGAGAGTTCTC -3'
(R):5'- ACAGGCTGTCTGAGAACAAC -3'
Posted On 2016-05-10