Incidental Mutation 'R5082:Bicc1'
ID 387202
Institutional Source Beutler Lab
Gene Symbol Bicc1
Ensembl Gene ENSMUSG00000014329
Gene Name BicC family RNA binding protein 1
Synonyms Bic-C, jcpk
MMRRC Submission 042671-MU
Accession Numbers
Essential gene? Essential (E-score: 1.000) question?
Stock # R5082 (G1)
Quality Score 225
Status Not validated
Chromosome 10
Chromosomal Location 70758662-70995530 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) G to T at 70776352 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Histidine to Glutamine at position 782 (H782Q)
Ref Sequence ENSEMBL: ENSMUSP00000123201 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000014473] [ENSMUST00000131445] [ENSMUST00000143791]
AlphaFold Q99MQ1
Predicted Effect probably benign
Transcript: ENSMUST00000014473
AA Change: H782Q

PolyPhen 2 Score 0.049 (Sensitivity: 0.94; Specificity: 0.83)
SMART Domains Protein: ENSMUSP00000014473
Gene: ENSMUSG00000014329
AA Change: H782Q

DomainStartEndE-ValueType
KH 47 129 2.69e0 SMART
KH 133 206 6.24e-18 SMART
KH 285 355 1.25e-8 SMART
low complexity region 384 402 N/A INTRINSIC
low complexity region 447 467 N/A INTRINSIC
low complexity region 480 499 N/A INTRINSIC
low complexity region 700 718 N/A INTRINSIC
low complexity region 736 747 N/A INTRINSIC
low complexity region 794 815 N/A INTRINSIC
SAM 872 938 2.04e-9 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000131445
AA Change: H700Q

PolyPhen 2 Score 0.049 (Sensitivity: 0.94; Specificity: 0.83)
SMART Domains Protein: ENSMUSP00000119137
Gene: ENSMUSG00000014329
AA Change: H700Q

DomainStartEndE-ValueType
SCOP:d1dtja_ 1 46 1e-2 SMART
Blast:KH 1 47 1e-22 BLAST
KH 51 124 6.24e-18 SMART
KH 203 273 1.25e-8 SMART
low complexity region 302 320 N/A INTRINSIC
low complexity region 365 385 N/A INTRINSIC
low complexity region 398 417 N/A INTRINSIC
low complexity region 618 636 N/A INTRINSIC
low complexity region 654 665 N/A INTRINSIC
low complexity region 712 733 N/A INTRINSIC
SAM 790 856 2.04e-9 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000143791
AA Change: H782Q

PolyPhen 2 Score 0.049 (Sensitivity: 0.94; Specificity: 0.83)
SMART Domains Protein: ENSMUSP00000123201
Gene: ENSMUSG00000014329
AA Change: H782Q

DomainStartEndE-ValueType
KH 47 129 2.69e0 SMART
KH 133 206 6.24e-18 SMART
KH 285 355 1.25e-8 SMART
low complexity region 384 402 N/A INTRINSIC
low complexity region 447 467 N/A INTRINSIC
low complexity region 480 499 N/A INTRINSIC
low complexity region 700 718 N/A INTRINSIC
low complexity region 736 747 N/A INTRINSIC
low complexity region 794 815 N/A INTRINSIC
SAM 872 938 4.26e-12 SMART
Predicted Effect noncoding transcript
Transcript: ENSMUST00000144740
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.6%
  • 10x: 96.9%
  • 20x: 94.3%
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes an RNA-binding protein that is active in regulating gene expression by modulating protein translation during embryonic development. Mouse studies identified the corresponding protein to be under strict control during cell differentiation and to be a maternally provided gene product. [provided by RefSeq, Apr 2009]
PHENOTYPE: Homozygous inactivation of this gene causes heteroxia, impaired nodal flow, ventricular septal defects, partial prenatal lethality and postnatal death due to renal failure. Chemically induced mutants develop kidney cysts and may show bulging abdomens, bile duct anomalies and cardiovascular defects. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 53 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abca9 T A 11: 110,022,694 (GRCm39) M1015L probably benign Het
Aftph T C 11: 20,677,100 (GRCm39) S170G probably damaging Het
Aox4 C T 1: 58,270,642 (GRCm39) P274S possibly damaging Het
Ash1l G A 3: 88,873,541 (GRCm39) R108Q probably damaging Het
Aspm T A 1: 139,406,414 (GRCm39) L1767* probably null Het
Baz2b T A 2: 59,731,835 (GRCm39) K2068* probably null Het
Bcl9 A T 3: 97,117,218 (GRCm39) V492D probably damaging Het
Cabin1 T A 10: 75,574,164 (GRCm39) I640F probably damaging Het
Ccng1 A G 11: 40,643,015 (GRCm39) V144A possibly damaging Het
Cdc23 C A 18: 34,784,742 (GRCm39) V7L unknown Het
Ddx1 G T 12: 13,270,436 (GRCm39) C668* probably null Het
Dhx58 G A 11: 100,587,802 (GRCm39) S585L probably benign Het
Dnttip2 A T 3: 122,069,590 (GRCm39) K268N probably damaging Het
Ecd C T 14: 20,374,436 (GRCm39) probably null Het
Entpd1 A G 19: 40,713,473 (GRCm39) probably null Het
Erlin2 T C 8: 27,523,435 (GRCm39) V224A probably damaging Het
Exoc3l4 A G 12: 111,394,424 (GRCm39) S515G probably benign Het
Fcho1 T C 8: 72,169,829 (GRCm39) D98G possibly damaging Het
Fhod1 T A 8: 106,057,145 (GRCm39) D943V probably damaging Het
Gm10322 A T 10: 59,452,090 (GRCm39) E69V possibly damaging Het
Gm14295 T A 2: 176,499,210 (GRCm39) L19* probably null Het
Gm7347 T A 5: 26,262,372 (GRCm39) R50* probably null Het
Hesx1 T C 14: 26,722,731 (GRCm39) C19R probably benign Het
Hgh1 T A 15: 76,253,752 (GRCm39) F199L probably benign Het
Irak2 T C 6: 113,649,805 (GRCm39) F147L probably damaging Het
Kif22 G A 7: 126,632,549 (GRCm39) R254C possibly damaging Het
Klhl9 A T 4: 88,639,622 (GRCm39) S206R probably damaging Het
Maip1 T C 1: 57,451,010 (GRCm39) probably null Het
Mcm9 T A 10: 53,414,156 (GRCm39) E308V possibly damaging Het
Mfsd13b A T 7: 120,598,201 (GRCm39) N369I possibly damaging Het
Mga T A 2: 119,733,825 (GRCm39) H224Q probably damaging Het
Mtss1 A T 15: 58,842,868 (GRCm39) W115R probably damaging Het
Myo3b T C 2: 70,088,374 (GRCm39) V851A probably benign Het
Nectin2 A T 7: 19,472,049 (GRCm39) D113E probably damaging Het
Notch2 G A 3: 98,007,690 (GRCm39) C480Y probably damaging Het
Or6b6 G A 7: 106,570,871 (GRCm39) R227C probably benign Het
Or8b55 T C 9: 38,727,441 (GRCm39) I214T possibly damaging Het
Pfdn1 G T 18: 36,537,466 (GRCm39) N111K probably damaging Het
Pfkl A T 10: 77,832,242 (GRCm39) V283E probably damaging Het
Plbd2 G T 5: 120,629,249 (GRCm39) S305* probably null Het
Prom1 T C 5: 44,158,174 (GRCm39) probably null Het
Ptbp2 T A 3: 119,546,613 (GRCm39) M90L probably benign Het
Rai1 G A 11: 60,076,745 (GRCm39) E270K possibly damaging Het
Rbbp6 G A 7: 122,599,925 (GRCm39) probably benign Het
Reln T C 5: 22,101,075 (GRCm39) M3399V probably benign Het
Ros1 T A 10: 52,040,037 (GRCm39) Y318F possibly damaging Het
Sh2d2a A G 3: 87,759,091 (GRCm39) D231G probably benign Het
Smn1 T C 13: 100,273,890 (GRCm39) probably benign Het
Snrnp200 C T 2: 127,068,290 (GRCm39) Q877* probably null Het
Taf2 G T 15: 54,923,441 (GRCm39) H279N probably benign Het
Tnfaip3 T C 10: 18,881,032 (GRCm39) Y345C probably damaging Het
Vmn2r68 C T 7: 84,883,076 (GRCm39) M225I probably benign Het
Vps13a A T 19: 16,722,257 (GRCm39) W352R probably damaging Het
Other mutations in Bicc1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00961:Bicc1 APN 10 70,796,987 (GRCm39) missense probably damaging 1.00
IGL01988:Bicc1 APN 10 70,792,006 (GRCm39) missense probably damaging 1.00
IGL02686:Bicc1 APN 10 70,779,190 (GRCm39) splice site probably benign
IGL02829:Bicc1 APN 10 70,794,710 (GRCm39) missense probably damaging 1.00
IGL03276:Bicc1 APN 10 70,789,268 (GRCm39) missense possibly damaging 0.76
IGL03354:Bicc1 APN 10 70,782,432 (GRCm39) missense probably benign 0.00
artemis UTSW 10 70,863,784 (GRCm39) missense probably damaging 0.99
Pebbles UTSW 10 70,783,730 (GRCm39) missense possibly damaging 0.95
PIT1430001:Bicc1 UTSW 10 70,793,511 (GRCm39) missense possibly damaging 0.94
R0095:Bicc1 UTSW 10 70,796,988 (GRCm39) missense probably damaging 1.00
R0142:Bicc1 UTSW 10 70,761,200 (GRCm39) missense probably damaging 1.00
R0184:Bicc1 UTSW 10 70,915,045 (GRCm39) missense probably benign
R0469:Bicc1 UTSW 10 70,915,045 (GRCm39) missense probably benign
R0485:Bicc1 UTSW 10 70,761,145 (GRCm39) missense probably damaging 0.96
R0520:Bicc1 UTSW 10 70,793,020 (GRCm39) missense probably damaging 0.96
R0884:Bicc1 UTSW 10 70,794,677 (GRCm39) missense probably damaging 1.00
R1678:Bicc1 UTSW 10 70,779,348 (GRCm39) missense probably damaging 1.00
R1892:Bicc1 UTSW 10 70,794,614 (GRCm39) missense probably damaging 1.00
R1943:Bicc1 UTSW 10 70,995,353 (GRCm39) missense probably damaging 1.00
R2220:Bicc1 UTSW 10 70,785,955 (GRCm39) missense probably damaging 1.00
R2240:Bicc1 UTSW 10 70,782,633 (GRCm39) critical splice donor site probably null
R2519:Bicc1 UTSW 10 70,766,474 (GRCm39) missense probably damaging 1.00
R4362:Bicc1 UTSW 10 70,779,204 (GRCm39) frame shift probably null
R4363:Bicc1 UTSW 10 70,779,204 (GRCm39) frame shift probably null
R4419:Bicc1 UTSW 10 70,782,804 (GRCm39) missense possibly damaging 0.73
R4697:Bicc1 UTSW 10 70,789,314 (GRCm39) missense possibly damaging 0.87
R4728:Bicc1 UTSW 10 70,771,661 (GRCm39) critical splice donor site probably null
R4765:Bicc1 UTSW 10 70,776,423 (GRCm39) missense probably damaging 1.00
R4838:Bicc1 UTSW 10 70,781,146 (GRCm39) missense possibly damaging 0.50
R5022:Bicc1 UTSW 10 70,783,713 (GRCm39) missense possibly damaging 0.79
R5023:Bicc1 UTSW 10 70,783,713 (GRCm39) missense possibly damaging 0.79
R5057:Bicc1 UTSW 10 70,783,713 (GRCm39) missense possibly damaging 0.79
R5160:Bicc1 UTSW 10 70,768,066 (GRCm39) missense probably damaging 1.00
R5294:Bicc1 UTSW 10 70,783,730 (GRCm39) missense possibly damaging 0.95
R5639:Bicc1 UTSW 10 70,776,350 (GRCm39) missense probably damaging 1.00
R5749:Bicc1 UTSW 10 70,782,799 (GRCm39) missense probably benign 0.00
R6045:Bicc1 UTSW 10 70,792,911 (GRCm39) nonsense probably null
R6128:Bicc1 UTSW 10 70,776,313 (GRCm39) splice site probably null
R6277:Bicc1 UTSW 10 70,863,731 (GRCm39) missense possibly damaging 0.74
R6389:Bicc1 UTSW 10 70,794,752 (GRCm39) missense probably damaging 1.00
R7021:Bicc1 UTSW 10 70,796,978 (GRCm39) missense probably damaging 0.99
R7101:Bicc1 UTSW 10 70,766,483 (GRCm39) missense probably damaging 1.00
R7351:Bicc1 UTSW 10 70,783,730 (GRCm39) missense probably benign 0.18
R7352:Bicc1 UTSW 10 70,783,730 (GRCm39) missense probably benign 0.18
R7353:Bicc1 UTSW 10 70,783,730 (GRCm39) missense probably benign 0.18
R7366:Bicc1 UTSW 10 70,779,216 (GRCm39) missense probably benign 0.01
R7480:Bicc1 UTSW 10 70,779,306 (GRCm39) missense probably damaging 1.00
R7541:Bicc1 UTSW 10 70,782,434 (GRCm39) missense possibly damaging 0.82
R7544:Bicc1 UTSW 10 70,792,204 (GRCm39) missense possibly damaging 0.89
R7555:Bicc1 UTSW 10 70,792,121 (GRCm39) missense possibly damaging 0.75
R7663:Bicc1 UTSW 10 70,782,420 (GRCm39) missense probably benign
R7671:Bicc1 UTSW 10 70,792,997 (GRCm39) missense probably benign 0.01
R7747:Bicc1 UTSW 10 70,782,823 (GRCm39) missense probably benign
R8129:Bicc1 UTSW 10 70,915,033 (GRCm39) missense probably benign 0.01
R8270:Bicc1 UTSW 10 70,767,938 (GRCm39) missense probably damaging 0.99
R8525:Bicc1 UTSW 10 70,779,365 (GRCm39) missense possibly damaging 0.67
R8762:Bicc1 UTSW 10 70,779,216 (GRCm39) missense probably benign 0.03
R8849:Bicc1 UTSW 10 70,782,694 (GRCm39) missense probably benign 0.23
R9120:Bicc1 UTSW 10 70,776,862 (GRCm39) missense probably damaging 1.00
R9164:Bicc1 UTSW 10 70,781,094 (GRCm39) missense probably damaging 1.00
R9368:Bicc1 UTSW 10 70,785,917 (GRCm39) missense probably benign 0.13
R9452:Bicc1 UTSW 10 70,792,981 (GRCm39) missense probably damaging 0.99
R9497:Bicc1 UTSW 10 70,776,828 (GRCm39) critical splice donor site probably null
R9641:Bicc1 UTSW 10 70,863,772 (GRCm39) missense probably benign 0.01
R9672:Bicc1 UTSW 10 70,794,666 (GRCm39) missense probably damaging 1.00
RF013:Bicc1 UTSW 10 70,771,660 (GRCm39) critical splice donor site probably null
X0028:Bicc1 UTSW 10 70,781,166 (GRCm39) missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- ACACTGCAGCTGCTCTTTGC -3'
(R):5'- AGAATGAAGAAACCTTGTTCCCC -3'

Sequencing Primer
(F):5'- ACCCCACTTTATCATGTAGGATAC -3'
(R):5'- TGAAGAAACCTTGTTCCCCCTCAG -3'
Posted On 2016-06-06