Mutagenetix > Incidental Mutation

Incidental Mutation 'R0427:Ttc14'

38724

Institutional Source

Beutler Lab

Gene Symbol

Ttc14

Ensembl Gene

ENSMUSG00000027677

Gene Name

tetratricopeptide repeat domain 14

Synonyms

4933402I15Rik, 4931403I22Rik, cI-44, 4930434D01Rik, 2700016E08Rik

MMRRC Submission

038629-MU

Accession Numbers

Essential gene?

Possibly non essential (E-score: 0.383) question?

Stock #

R0427 (G1)

Quality Score

177

Status

Not validated

Chromosome

Chromosomal Location

33853981-33869009 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 33857633 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Serine to Proline at position 245 (S245P)

Ref Sequence

ENSEMBL: ENSMUSP00000103845 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000099153] [ENSMUST00000108210] [ENSMUST00000117915] [ENSMUST00000196139] [ENSMUST00000196369] [ENSMUST00000196975] [ENSMUST00000199222] [ENSMUST00000200271] [ENSMUST00000198529]

AlphaFold

no structure available at present

Predicted Effect

possibly damaging
Transcript: ENSMUST00000099153
AA Change: S245P

PolyPhen 2 Score 0.938 (Sensitivity: 0.80; Specificity: 0.94)

SMART Domains

Protein: ENSMUSP00000096757
Gene: ENSMUSG00000027677
AA Change: S245P

Domain	Start	End	E-Value	Type
low complexity region	38	56	N/A	INTRINSIC
S1	123	207	7.28e-2	SMART
TPR	306	339	6.19e-1	SMART
TPR	340	373	2.11e-3	SMART
TPR	381	414	1.88e0	SMART

Predicted Effect

probably damaging
Transcript: ENSMUST00000108210
AA Change: S245P

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)

SMART Domains

Protein: ENSMUSP00000103845
Gene: ENSMUSG00000027677
AA Change: S245P

Domain	Start	End	E-Value	Type
low complexity region	38	56	N/A	INTRINSIC
S1	123	207	7.28e-2	SMART
TPR	306	339	6.19e-1	SMART
TPR	340	373	2.11e-3	SMART
TPR	381	414	1.88e0	SMART
coiled coil region	415	476	N/A	INTRINSIC
low complexity region	617	630	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000117915

SMART Domains

Protein: ENSMUSP00000112450
Gene: ENSMUSG00000027677

Domain	Start	End	E-Value	Type
low complexity region	38	56	N/A	INTRINSIC
S1	123	207	7.28e-2	SMART
TPR	254	287	6.19e-1	SMART
TPR	288	321	2.11e-3	SMART
TPR	329	362	1.88e0	SMART
coiled coil region	363	424	N/A	INTRINSIC
low complexity region	565	578	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000196139

SMART Domains

Protein: ENSMUSP00000143173
Gene: ENSMUSG00000027677

Domain	Start	End	E-Value	Type
low complexity region	38	54	N/A	INTRINSIC
SCOP:d1go3e_	144	217	3e-5	SMART
Blast:S1	154	217	2e-39	BLAST

Predicted Effect

possibly damaging
Transcript: ENSMUST00000196369
AA Change: S143P

PolyPhen 2 Score 0.953 (Sensitivity: 0.79; Specificity: 0.95)

SMART Domains

Protein: ENSMUSP00000142863
Gene: ENSMUSG00000027677
AA Change: S143P

Domain	Start	End	E-Value	Type
S1	21	105	7.28e-2	SMART
TPR	204	237	6.19e-1	SMART
TPR	238	271	2.11e-3	SMART
TPR	279	312	1.88e0	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000196975

SMART Domains

Protein: ENSMUSP00000142684
Gene: ENSMUSG00000027677

Domain	Start	End	E-Value	Type
low complexity region	38	56	N/A	INTRINSIC
S1	123	207	4.6e-4	SMART
TPR	254	287	3e-3	SMART
TPR	288	321	1e-5	SMART
TPR	329	362	9e-3	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000197592

Predicted Effect

probably damaging
Transcript: ENSMUST00000199222
AA Change: S245P

PolyPhen 2 Score 0.983 (Sensitivity: 0.75; Specificity: 0.96)

SMART Domains

Protein: ENSMUSP00000142935
Gene: ENSMUSG00000027677
AA Change: S245P

Domain	Start	End	E-Value	Type
low complexity region	38	56	N/A	INTRINSIC
S1	123	207	7.28e-2	SMART
TPR	306	339	6.19e-1	SMART
TPR	340	373	2.11e-3	SMART
TPR	381	414	1.88e0	SMART

Predicted Effect

probably damaging
Transcript: ENSMUST00000200271
AA Change: S242P

PolyPhen 2 Score 0.983 (Sensitivity: 0.75; Specificity: 0.96)

SMART Domains

Protein: ENSMUSP00000143738
Gene: ENSMUSG00000027677
AA Change: S242P

Domain	Start	End	E-Value	Type
S1	120	204	7.28e-2	SMART
TPR	303	336	6.19e-1	SMART
TPR	337	370	2.11e-3	SMART
TPR	378	411	1.88e0	SMART

Predicted Effect

probably damaging
Transcript: ENSMUST00000198529
AA Change: S245P

PolyPhen 2 Score 0.970 (Sensitivity: 0.77; Specificity: 0.96)

SMART Domains

Protein: ENSMUSP00000143073
Gene: ENSMUSG00000027677
AA Change: S245P

Domain	Start	End	E-Value	Type
low complexity region	38	56	N/A	INTRINSIC
S1	123	207	7.28e-2	SMART
Pfam:TPR_11	304	371	2.1e-12	PFAM
Pfam:TPR_2	306	339	1.9e-4	PFAM
Pfam:TPR_1	308	339	1.3e-4	PFAM
Pfam:TPR_1	340	373	2.9e-5	PFAM
Pfam:TPR_2	340	373	6.8e-4	PFAM
low complexity region	395	408	N/A	INTRINSIC

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000199523

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000200559

Coding Region Coverage

1x: 99.1%
3x: 98.3%
10x: 96.2%
20x: 92.9%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 79 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Adam34	T	G	8: 44,105,493 (GRCm39)	T51P	probably benign	Het
Alpk1	A	T	3: 127,464,720 (GRCm39)	V1186E	probably damaging	Het
Ankfn1	T	C	11: 89,296,423 (GRCm39)	D102G	probably damaging	Het
Armc2	A	G	10: 41,876,406 (GRCm39)	I127T	possibly damaging	Het
Atp6v1b2	T	C	8: 69,554,084 (GRCm39)	L87P	probably damaging	Het
Atp9a	T	A	2: 168,482,617 (GRCm39)		probably null	Het
BC048679	C	G	7: 81,144,993 (GRCm39)	V123L	probably benign	Het
Birc7	G	A	2: 180,571,307 (GRCm39)		probably null	Het
Btbd9	C	T	17: 30,493,916 (GRCm39)	D492N	possibly damaging	Het
Cacna1d	T	A	14: 30,068,774 (GRCm39)	N155I	probably damaging	Het
Cd300lg	T	C	11: 101,933,852 (GRCm39)	V33A	probably damaging	Het
Cep290	A	G	10: 100,352,041 (GRCm39)	D742G	probably benign	Het
Cep95	A	G	11: 106,681,578 (GRCm39)	N14S	probably benign	Het
Cfap74	A	T	4: 155,525,734 (GRCm39)	M728L	probably benign	Het
Ctsll3	T	A	13: 60,949,205 (GRCm39)	T9S	probably benign	Het
Cyp3a44	A	G	5: 145,716,412 (GRCm39)	S393P	possibly damaging	Het
Dmbt1	T	A	7: 130,642,632 (GRCm39)	L150*	probably null	Het
Dnah2	A	G	11: 69,343,705 (GRCm39)	I2868T	probably damaging	Het
Dop1a	A	G	9: 86,389,585 (GRCm39)	H505R	probably damaging	Het
Exo1	A	G	1: 175,733,519 (GRCm39)	K781R	probably damaging	Het
Fam184a	A	G	10: 53,566,211 (GRCm39)	Y459H	probably damaging	Het
Foxp1	C	T	6: 98,907,164 (GRCm39)	D540N	probably damaging	Het
Fstl5	T	A	3: 76,615,034 (GRCm39)	Y698*	probably null	Het
Gm5141	T	C	13: 62,922,525 (GRCm39)	K215E	probably damaging	Het
Grik5	C	A	7: 24,757,923 (GRCm39)	R386L	probably benign	Het
Ikbke	A	T	1: 131,185,647 (GRCm39)	S620R	possibly damaging	Het
Kcnh3	A	T	15: 99,131,180 (GRCm39)	M518L	probably benign	Het
Lrrcc1	G	T	3: 14,623,416 (GRCm39)	A748S	probably damaging	Het
Mbd5	T	G	2: 49,169,091 (GRCm39)	S1191A	probably benign	Het
Med27	T	C	2: 29,390,283 (GRCm39)	I70T	probably damaging	Het
Mplkipl1	A	G	19: 61,163,908 (GRCm39)	Y176H	probably damaging	Het
Myh4	A	G	11: 67,149,479 (GRCm39)	D1737G	probably damaging	Het
Myo5a	A	G	9: 75,081,478 (GRCm39)	D1021G	probably benign	Het
Ncor1	T	C	11: 62,301,746 (GRCm39)	E212G	probably damaging	Het
Neb	A	T	2: 52,133,896 (GRCm39)	N3362K	possibly damaging	Het
Neb	A	G	2: 52,134,081 (GRCm39)	S3301P	probably damaging	Het
Neurod1	T	G	2: 79,284,526 (GRCm39)	K286Q	probably damaging	Het
Noc3l	T	C	19: 38,778,095 (GRCm39)	Q773R	probably benign	Het
Nup205	T	A	6: 35,171,398 (GRCm39)	N420K	probably benign	Het
Olfml3	A	T	3: 103,644,330 (GRCm39)	V113E	probably benign	Het
Opa1	T	C	16: 29,430,279 (GRCm39)	V439A	probably damaging	Het
Or13c7	A	G	4: 43,854,417 (GRCm39)	Y36C	probably damaging	Het
Or14j7	A	T	17: 38,234,520 (GRCm39)	H21L	probably benign	Het
Or1j14	C	T	2: 36,417,994 (GRCm39)	S190L	probably damaging	Het
Or1o11	T	A	17: 37,756,593 (GRCm39)	D60E	probably damaging	Het
Pcdhb11	T	C	18: 37,555,818 (GRCm39)	S383P	probably damaging	Het
Pkd1	T	C	17: 24,812,476 (GRCm39)	V3803A	probably damaging	Het
Plekhg1	A	G	10: 3,914,235 (GRCm39)	D1319G	probably benign	Het
Polq	T	A	16: 36,882,355 (GRCm39)	C1227*	probably null	Het
Pramel22	A	T	4: 143,380,993 (GRCm39)	N343K	probably benign	Het
Psmc1	T	C	12: 100,085,487 (GRCm39)	F283L	probably damaging	Het
Psmd8	T	C	7: 28,875,552 (GRCm39)	N189S	probably damaging	Het
Ptger4	G	A	15: 5,272,382 (GRCm39)	T104I	probably benign	Het
Ptpro	T	G	6: 137,345,294 (GRCm39)	V100G	possibly damaging	Het
Rab11fip1	T	A	8: 27,644,520 (GRCm39)	T422S	probably damaging	Het
Rad54l2	A	G	9: 106,570,891 (GRCm39)	L1143P	possibly damaging	Het
Rnf148	A	G	6: 23,654,072 (GRCm39)	M308T	probably damaging	Het
Sbsn	T	A	7: 30,451,523 (GRCm39)		probably benign	Het
Scube2	T	A	7: 109,424,044 (GRCm39)	T487S	probably benign	Het
Sema4c	C	A	1: 36,592,892 (GRCm39)	E109*	probably null	Het
Sipa1l2	A	T	8: 126,207,071 (GRCm39)	L544Q	probably damaging	Het
Slc28a2	A	G	2: 122,288,702 (GRCm39)	T603A	probably benign	Het
Tbc1d7	T	A	13: 43,306,563 (GRCm39)	T138S	probably benign	Het
Timd4	A	T	11: 46,710,084 (GRCm39)	T239S	probably benign	Het
Trp53bp1	A	G	2: 121,066,498 (GRCm39)	S743P	probably damaging	Het
Tspan10	T	A	11: 120,335,120 (GRCm39)	Y77N	probably damaging	Het
Ttf1	T	A	2: 28,955,054 (GRCm39)	S139R	probably benign	Het
Tubd1	C	A	11: 86,448,616 (GRCm39)	Q279K	possibly damaging	Het
Twnk	A	G	19: 44,996,026 (GRCm39)	E153G	probably benign	Het
Ush2a	A	G	1: 188,132,478 (GRCm39)	D900G	probably damaging	Het
Usp54	A	G	14: 20,620,432 (GRCm39)	V691A	probably benign	Het
Usp8	T	C	2: 126,559,952 (GRCm39)		probably benign	Het
Vmn1r231	C	T	17: 21,110,490 (GRCm39)	V142I	probably benign	Het
Vmn2r15	C	T	5: 109,434,953 (GRCm39)	A584T	probably damaging	Het
Vmn2r6	A	G	3: 64,467,008 (GRCm39)	S164P	probably damaging	Het
Vps16	A	G	2: 130,280,770 (GRCm39)	Y233C	probably benign	Het
Vwf	C	G	6: 125,650,902 (GRCm39)	H2511D	probably benign	Het
Wipf3	T	G	6: 54,460,882 (GRCm39)	L110R	possibly damaging	Het
Zfp945	T	A	17: 23,084,226 (GRCm39)	N11I	probably benign	Het

Other mutations in Ttc14

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01154:Ttc14	APN	3	33,857,248 (GRCm39)	missense	probably benign	0.35
IGL01326:Ttc14	APN	3	33,855,507 (GRCm39)	missense	probably benign	0.14
R0196:Ttc14	UTSW	3	33,863,403 (GRCm39)	unclassified	probably benign
R1713:Ttc14	UTSW	3	33,857,069 (GRCm39)	missense	probably damaging	1.00
R2312:Ttc14	UTSW	3	33,861,984 (GRCm39)	splice site	probably null
R2434:Ttc14	UTSW	3	33,855,227 (GRCm39)	missense	probably benign	0.40
R4794:Ttc14	UTSW	3	33,857,298 (GRCm39)	missense	probably benign	0.00
R4825:Ttc14	UTSW	3	33,855,518 (GRCm39)	missense	possibly damaging	0.88
R4888:Ttc14	UTSW	3	33,861,024 (GRCm39)	nonsense	probably null
R5143:Ttc14	UTSW	3	33,863,050 (GRCm39)	unclassified	probably benign
R6051:Ttc14	UTSW	3	33,863,073 (GRCm39)	unclassified	probably benign
R6270:Ttc14	UTSW	3	33,854,537 (GRCm39)	missense	possibly damaging	0.68
R6415:Ttc14	UTSW	3	33,857,724 (GRCm39)	missense	possibly damaging	0.81
R6439:Ttc14	UTSW	3	33,862,968 (GRCm39)	unclassified	probably benign
R7021:Ttc14	UTSW	3	33,857,646 (GRCm39)	missense	probably damaging	0.99
R7571:Ttc14	UTSW	3	33,863,400 (GRCm39)	missense	unknown
R7751:Ttc14	UTSW	3	33,863,590 (GRCm39)	missense	unknown
R8021:Ttc14	UTSW	3	33,863,270 (GRCm39)	nonsense	probably null
R8388:Ttc14	UTSW	3	33,854,735 (GRCm39)	missense	probably benign	0.01
R8884:Ttc14	UTSW	3	33,854,696 (GRCm39)	missense	unknown
R9169:Ttc14	UTSW	3	33,857,071 (GRCm39)	nonsense	probably null
R9399:Ttc14	UTSW	3	33,858,856 (GRCm39)	missense	possibly damaging	0.62
R9438:Ttc14	UTSW	3	33,858,861 (GRCm39)	missense	probably damaging	1.00
R9537:Ttc14	UTSW	3	33,857,347 (GRCm39)	missense	probably damaging	0.96
R9663:Ttc14	UTSW	3	33,855,537 (GRCm39)	missense	probably benign	0.01

Predicted Primers

PCR Primer
(F):5'- CCTCCACACATGGCTGGCATTAAAC -3'
(R):5'- TGTAGCCTCTGAGCTAATCCACACC -3'

Sequencing Primer
(F):5'- CATGGCTGGCATTAAACTAGGTG -3'
(R):5'- CCCTCACCACCTTTATCAGCTAAG -3'

Posted On

2013-05-23