Incidental Mutation 'R5067:Gm5828'
ID388356
Institutional Source Beutler Lab
Gene Symbol Gm5828
Ensembl Gene ENSMUSG00000091020
Gene Namepredicted gene 5828
Synonyms
MMRRC Submission 042657-MU
Accession Numbers
Is this an essential gene? Possibly non essential (E-score: 0.276) question?
Stock #R5067 (G1)
Quality Score225
Status Validated
Chromosome1
Chromosomal Location16768279-16770138 bp(-) (GRCm38)
Type of Mutationexon
DNA Base Change (assembly) A to G at 16769292 bp
ZygosityHeterozygous
Amino Acid Change
Gene Model predicted gene model for transcript(s):
Predicted Effect noncoding transcript
Transcript: ENSMUST00000071842
SMART Domains Protein: ENSMUSP00000136559
Gene: ENSMUSG00000091020

DomainStartEndE-ValueType
low complexity region 60 74 N/A INTRINSIC
low complexity region 143 163 N/A INTRINSIC
low complexity region 174 182 N/A INTRINSIC
low complexity region 207 218 N/A INTRINSIC
HMG 222 292 1.88e-17 SMART
low complexity region 307 339 N/A INTRINSIC
low complexity region 435 481 N/A INTRINSIC
Meta Mutation Damage Score 0.0869 question?
Coding Region Coverage
  • 1x: 99.1%
  • 3x: 98.3%
  • 10x: 96.0%
  • 20x: 91.3%
Validation Efficiency 100% (54/54)
Allele List at MGI
Other mutations in this stock
Total: 39 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Ahnak2 T C 12: 112,785,316 N304D probably benign Het
Akr7a5 T C 4: 139,311,022 S90P probably damaging Het
Aplnr T A 2: 85,136,784 V51E probably damaging Het
Arhgap21 A T 2: 20,880,037 H776Q probably damaging Het
Asxl3 C G 18: 22,525,299 A2122G possibly damaging Het
Bsn T A 9: 108,111,953 Y2200F probably damaging Het
Btbd10 A T 7: 113,325,836 D268E probably damaging Het
Cacna1h T C 17: 25,397,808 N113D probably damaging Het
Cfap54 T C 10: 93,066,766 N175D probably benign Het
Cfap61 A G 2: 146,102,036 D134G probably damaging Het
Clybl A T 14: 122,379,289 I239L possibly damaging Het
Defb11 A T 8: 21,906,336 F15Y probably damaging Het
Dlc1 A G 8: 36,584,493 S695P probably benign Het
Dscr3 T A 16: 94,526,404 probably benign Het
Fam196a A T 7: 134,918,555 V82E probably benign Het
Fbxl5 T C 5: 43,758,772 K432E probably benign Het
Fryl T C 5: 73,057,755 E2226G probably benign Het
Gm10337 T A 15: 102,503,871 probably null Het
Gm8674 A T 13: 49,899,834 noncoding transcript Het
Ighv6-5 T C 12: 114,416,571 probably null Het
Ints14 C A 9: 64,964,412 L11M probably damaging Het
Kcp G A 6: 29,492,108 P153L probably benign Het
Lrrk2 A C 15: 91,765,790 N1710T probably benign Het
March10 T A 11: 105,390,107 T451S possibly damaging Het
Mcf2l T G 8: 12,915,959 probably benign Het
Mfng C T 15: 78,764,388 R163H probably benign Het
Neurod2 T A 11: 98,327,237 H367L possibly damaging Het
Nfatc4 A T 14: 55,832,418 Q681L probably damaging Het
Nkx3-2 T C 5: 41,761,877 N256S probably damaging Het
Ntng1 G A 3: 110,135,345 T55M possibly damaging Het
Snd1 C A 6: 28,888,240 N891K probably damaging Het
Syt7 T C 19: 10,442,858 V382A possibly damaging Het
Trim72 T C 7: 128,009,967 S314P possibly damaging Het
Ttc41 T C 10: 86,744,544 S785P probably damaging Het
Ube2z C T 11: 96,063,009 V128I probably benign Het
Wdr43 T C 17: 71,626,854 Y149H probably benign Het
Wnk4 T A 11: 101,262,856 V248E probably damaging Het
Zcchc2 A T 1: 106,030,964 N1055I probably damaging Het
Zdhhc23 T C 16: 43,973,771 Y180C probably benign Het
Other mutations in Gm5828
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01143:Gm5828 APN 1 16769948 exon noncoding transcript
IGL01751:Gm5828 APN 1 16769984 exon noncoding transcript
IGL02275:Gm5828 APN 1 16769118 exon noncoding transcript
IGL02400:Gm5828 APN 1 16769818 exon noncoding transcript
IGL02480:Gm5828 APN 1 16769542 exon noncoding transcript
R0143:Gm5828 UTSW 1 16768355 exon noncoding transcript
R1245:Gm5828 UTSW 1 16769129 exon noncoding transcript
R1405:Gm5828 UTSW 1 16769544 exon noncoding transcript
R1514:Gm5828 UTSW 1 16769359 exon noncoding transcript
R1644:Gm5828 UTSW 1 16769261 exon noncoding transcript
R2118:Gm5828 UTSW 1 16769975 exon noncoding transcript
R2290:Gm5828 UTSW 1 16768344 exon noncoding transcript
R3428:Gm5828 UTSW 1 16768614 exon noncoding transcript
R3962:Gm5828 UTSW 1 16768644 exon noncoding transcript
R4657:Gm5828 UTSW 1 16769418 exon noncoding transcript
Predicted Primers PCR Primer
(F):5'- TTGGTTTGCCACATTAGATGAAAGC -3'
(R):5'- ATGAACCGCAGAAGCCAGTC -3'

Sequencing Primer
(F):5'- TTCACTATGATGCAAGGGGGC -3'
(R):5'- GCAGAAGCCAGTCTCTGCTTATG -3'
Posted On2016-06-06