Incidental Mutation 'R5006:Or6b6'
| ID |
390165 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Or6b6
|
| Ensembl Gene |
ENSMUSG00000045013 |
| Gene Name |
olfactory receptor family 6 subfamily B member 6 |
| Synonyms |
MOR103-4, Olfr711, GA_x6K02T2PBJ9-9352783-9351839 |
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.079)
|
| Stock # |
R5006 (G1)
|
| Quality Score |
225 |
|
Status
|
Not validated
|
| Chromosome |
7 |
| Chromosomal Location |
106570575-106574658 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
C to T
at 106570808 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Valine to Isoleucine
at position 248
(V248I)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000149016
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000051715]
[ENSMUST00000207200]
[ENSMUST00000216335]
|
| AlphaFold |
Q9EPG2 |
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000051715
AA Change: V248I
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
| SMART Domains |
Protein: ENSMUSP00000055724
Gene: ENSMUSG00000045013
AA Change: V248I
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
31 |
307 |
1.5e-58 |
PFAM |
|
Pfam:7tm_1
|
41 |
290 |
1.2e-19 |
PFAM |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000207200
AA Change: V248I
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000216335
AA Change: V248I
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
| Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.4%
- 10x: 96.7%
- 20x: 93.6%
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 21 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Abcf2 |
C |
A |
5: 24,781,535 (GRCm39) |
E51* |
probably null |
Het |
| Bcl11a |
T |
A |
11: 24,114,989 (GRCm39) |
Y777* |
probably null |
Het |
| C2cd4c |
T |
A |
10: 79,448,341 (GRCm39) |
T269S |
probably benign |
Het |
| Ciao2a |
G |
A |
9: 66,043,634 (GRCm39) |
|
probably null |
Het |
| Efcab3 |
T |
A |
11: 104,620,503 (GRCm39) |
|
probably null |
Het |
| Foxp1 |
A |
C |
6: 99,139,819 (GRCm39) |
V54G |
probably damaging |
Het |
| Il2ra |
T |
G |
2: 11,679,157 (GRCm39) |
L39R |
possibly damaging |
Het |
| Klk1b9 |
A |
T |
7: 43,628,711 (GRCm39) |
K72* |
probably null |
Het |
| Lmo7 |
A |
G |
14: 102,163,673 (GRCm39) |
|
probably benign |
Het |
| Mfng |
C |
T |
15: 78,648,588 (GRCm39) |
R163H |
probably benign |
Het |
| Nebl |
T |
A |
2: 17,393,582 (GRCm39) |
|
probably null |
Het |
| Or7e169 |
G |
T |
9: 19,757,567 (GRCm39) |
A116E |
probably benign |
Het |
| Or7g30 |
A |
G |
9: 19,352,545 (GRCm39) |
N112S |
probably benign |
Het |
| Ralgapa1 |
A |
T |
12: 55,764,899 (GRCm39) |
C918S |
probably benign |
Het |
| Rasd2 |
G |
T |
8: 75,945,234 (GRCm39) |
R21L |
probably damaging |
Het |
| Sema4a |
A |
G |
3: 88,344,091 (GRCm39) |
M720T |
probably benign |
Het |
| Susd3 |
A |
G |
13: 49,392,181 (GRCm39) |
|
probably benign |
Het |
| Vmn1r235 |
T |
C |
17: 21,482,467 (GRCm39) |
M264T |
probably benign |
Het |
| Wls |
A |
G |
3: 159,617,428 (GRCm39) |
I368V |
possibly damaging |
Het |
| Ypel4 |
A |
G |
2: 84,567,182 (GRCm39) |
D5G |
probably benign |
Het |
| Zbtb38 |
C |
T |
9: 96,567,704 (GRCm39) |
G1127S |
probably damaging |
Het |
|
| Other mutations in Or6b6 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL02600:Or6b6
|
APN |
7 |
106,570,756 (GRCm39) |
missense |
possibly damaging |
0.51 |
|
R0087:Or6b6
|
UTSW |
7 |
106,571,323 (GRCm39) |
missense |
probably benign |
0.01 |
|
R0580:Or6b6
|
UTSW |
7 |
106,571,447 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1375:Or6b6
|
UTSW |
7 |
106,571,305 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1538:Or6b6
|
UTSW |
7 |
106,571,190 (GRCm39) |
nonsense |
probably null |
|
|
R1875:Or6b6
|
UTSW |
7 |
106,571,389 (GRCm39) |
missense |
possibly damaging |
0.86 |
|
R2156:Or6b6
|
UTSW |
7 |
106,570,775 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4290:Or6b6
|
UTSW |
7 |
106,570,918 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R4332:Or6b6
|
UTSW |
7 |
106,571,354 (GRCm39) |
missense |
probably benign |
0.00 |
|
R4400:Or6b6
|
UTSW |
7 |
106,571,209 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4688:Or6b6
|
UTSW |
7 |
106,571,068 (GRCm39) |
missense |
probably benign |
0.02 |
|
R4868:Or6b6
|
UTSW |
7 |
106,570,974 (GRCm39) |
missense |
probably benign |
|
|
R4970:Or6b6
|
UTSW |
7 |
106,570,778 (GRCm39) |
missense |
probably benign |
0.35 |
|
R5082:Or6b6
|
UTSW |
7 |
106,570,871 (GRCm39) |
missense |
probably benign |
0.00 |
|
R5121:Or6b6
|
UTSW |
7 |
106,571,438 (GRCm39) |
missense |
probably benign |
|
|
R6465:Or6b6
|
UTSW |
7 |
106,571,419 (GRCm39) |
missense |
possibly damaging |
0.63 |
|
R6541:Or6b6
|
UTSW |
7 |
106,571,410 (GRCm39) |
missense |
probably benign |
0.20 |
|
R7419:Or6b6
|
UTSW |
7 |
106,571,353 (GRCm39) |
missense |
probably benign |
0.01 |
|
R8048:Or6b6
|
UTSW |
7 |
106,571,671 (GRCm39) |
start gained |
probably benign |
|
|
R9310:Or6b6
|
UTSW |
7 |
106,570,678 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9470:Or6b6
|
UTSW |
7 |
106,571,461 (GRCm39) |
missense |
probably benign |
0.26 |
|
R9603:Or6b6
|
UTSW |
7 |
106,571,103 (GRCm39) |
nonsense |
probably null |
|
|
Z1177:Or6b6
|
UTSW |
7 |
106,571,122 (GRCm39) |
missense |
probably benign |
0.00 |
|
| Predicted Primers |
PCR Primer
(F):5'- TTTCTCAGGGCAAAGGGATC -3'
(R):5'- ATGCAAAGATATGTCCACAGCTG -3'
Sequencing Primer
(F):5'- AGGAAGCACTGGCCACCTC -3'
(R):5'- CCACAGCTGAGCTAGTAGACTTTG -3'
|
| Posted On |
2016-06-06 |
Incidental Mutation