Incidental Mutation 'R5056:Chil6'
ID 390830
Institutional Source Beutler Lab
Gene Symbol Chil6
Ensembl Gene ENSMUSG00000027902
Gene Name chitinase-like 6
Synonyms BYm, BC051070
MMRRC Submission 042646-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.057) question?
Stock # R5056 (G1)
Quality Score 225
Status Validated
Chromosome 3
Chromosomal Location 106294700-106313498 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to A at 106301659 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Tyrosine to Phenylalanine at position 147 (Y147F)
Ref Sequence ENSEMBL: ENSMUSP00000029510 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000029510]
AlphaFold Q80W26
Predicted Effect probably damaging
Transcript: ENSMUST00000029510
AA Change: Y147F

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000029510
Gene: ENSMUSG00000027902
AA Change: Y147F

DomainStartEndE-ValueType
Glyco_18 39 382 3.04e-122 SMART
Meta Mutation Damage Score 0.5479 question?
Coding Region Coverage
  • 1x: 99.1%
  • 3x: 98.3%
  • 10x: 96.0%
  • 20x: 91.2%
Validation Efficiency 99% (73/74)
Allele List at MGI
Other mutations in this stock
Total: 66 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
1700030J22Rik T A 8: 117,698,421 (GRCm39) K229* probably null Het
Adora2a T A 10: 75,161,992 (GRCm39) S44T probably damaging Het
Agap3 T C 5: 24,682,860 (GRCm39) V459A probably damaging Het
Apc2 T C 10: 80,137,148 (GRCm39) V31A probably benign Het
Asic2 T A 11: 80,862,429 (GRCm39) K189N possibly damaging Het
Bbs10 C T 10: 111,136,401 (GRCm39) P505S probably benign Het
Brd10 A T 19: 29,694,759 (GRCm39) I1578K probably benign Het
Cdh20 G T 1: 104,881,722 (GRCm39) V396L probably benign Het
Cenpb C T 2: 131,020,091 (GRCm39) probably benign Het
Cluh C T 11: 74,552,772 (GRCm39) R606C probably damaging Het
Cmtr1 A G 17: 29,909,302 (GRCm39) T404A possibly damaging Het
Cnot1 T C 8: 96,467,636 (GRCm39) N1499S probably damaging Het
Dmkn T C 7: 30,463,529 (GRCm39) S61P probably damaging Het
Dmxl1 T C 18: 50,003,990 (GRCm39) C872R probably benign Het
Dnah3 A G 7: 119,620,169 (GRCm39) Y1587H probably damaging Het
Dsc2 A T 18: 20,183,199 (GRCm39) V73D probably damaging Het
F5 A T 1: 164,019,601 (GRCm39) Y692F possibly damaging Het
Fam184a A T 10: 53,550,670 (GRCm39) L80I probably damaging Het
Foxj2 A G 6: 122,810,833 (GRCm39) H271R probably benign Het
Grm7 A G 6: 111,057,404 (GRCm39) T335A probably damaging Het
Hspa9 A G 18: 35,071,734 (GRCm39) L622P probably damaging Het
Kcna7 G A 7: 45,056,015 (GRCm39) R77H probably damaging Het
Kcnd3 T A 3: 105,574,244 (GRCm39) probably benign Het
Klhdc8b ACACGCACGCACGCACGCACGCACGCACGCACGCACGCAC ACACGCACGCACGCACGCACGCACGCACGCACGCACGCACGCAC 9: 108,326,184 (GRCm39) probably benign Het
Klk14 G A 7: 43,341,501 (GRCm39) C51Y probably damaging Het
Lrch4 C G 5: 137,635,113 (GRCm39) N237K probably damaging Het
Lss T G 10: 76,388,760 (GRCm39) probably null Het
Map6 T C 7: 98,985,859 (GRCm39) F588L probably benign Het
Mbd6 C T 10: 127,122,310 (GRCm39) V173I probably benign Het
Med13 A T 11: 86,219,391 (GRCm39) S352T probably benign Het
Mettl16 T A 11: 74,707,766 (GRCm39) V320E probably benign Het
Myh7b G C 2: 155,474,293 (GRCm39) R1669S possibly damaging Het
Nup188 T A 2: 30,194,143 (GRCm39) D149E probably damaging Het
Ogfrl1 A G 1: 23,418,130 (GRCm39) S83P probably damaging Het
Or52l1 T A 7: 104,829,779 (GRCm39) H262L probably damaging Het
Or5m13 T A 2: 85,748,480 (GRCm39) D70E probably damaging Het
Or8k36-ps1 T A 2: 86,437,364 (GRCm39) I184F unknown Het
Or9m1 T C 2: 87,733,915 (GRCm39) Y35C probably damaging Het
Pafah1b3 C T 7: 24,994,764 (GRCm39) R98Q probably damaging Het
Pde6b A T 5: 108,571,357 (GRCm39) K437* probably null Het
Ppp1r12b A T 1: 134,762,130 (GRCm39) probably benign Het
Ppp1r12b G T 1: 134,883,471 (GRCm39) A17E probably benign Het
Pramel34 T C 5: 93,786,784 (GRCm39) probably benign Het
Prdm9 T C 17: 15,782,679 (GRCm39) Q104R possibly damaging Het
Rgs22 A T 15: 36,050,391 (GRCm39) probably null Het
Rnf14 C T 18: 38,441,441 (GRCm39) P277L probably damaging Het
Robo4 T C 9: 37,316,102 (GRCm39) S258P probably benign Het
Sfrp1 T A 8: 23,907,420 (GRCm39) F207I probably damaging Het
Sgms1 A G 19: 32,137,087 (GRCm39) S160P probably damaging Het
Sil1 T C 18: 35,402,755 (GRCm39) K263R probably benign Het
St14 A G 9: 31,008,847 (GRCm39) probably null Het
Syne2 A G 12: 75,955,905 (GRCm39) probably benign Het
Tbc1d9 T C 8: 83,995,835 (GRCm39) S1013P probably benign Het
Tent5b C T 4: 133,207,749 (GRCm39) R47W possibly damaging Het
Tmem67 T C 4: 12,070,471 (GRCm39) S352G probably benign Het
Trib2 C A 12: 15,843,795 (GRCm39) K282N possibly damaging Het
Trnau1ap T C 4: 132,054,482 (GRCm39) probably benign Het
Trpm4 T C 7: 44,958,054 (GRCm39) D952G probably damaging Het
Unc93b1 A G 19: 3,992,762 (GRCm39) N305D possibly damaging Het
Usp32 A G 11: 84,917,621 (GRCm39) V802A probably benign Het
Vmn2r48 T A 7: 9,676,251 (GRCm39) H410L probably damaging Het
Wfs1 T C 5: 37,132,931 (GRCm39) N116S probably benign Het
Wif1 A T 10: 120,935,684 (GRCm39) H333L probably benign Het
Zfp109 T C 7: 23,928,162 (GRCm39) T416A possibly damaging Het
Zfp808 T A 13: 62,320,444 (GRCm39) C558S probably damaging Het
Zpbp T C 11: 11,409,734 (GRCm39) D116G possibly damaging Het
Other mutations in Chil6
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01411:Chil6 APN 3 106,296,141 (GRCm39) missense probably damaging 1.00
IGL01735:Chil6 APN 3 106,296,004 (GRCm39) critical splice donor site probably null
IGL01795:Chil6 APN 3 106,296,108 (GRCm39) missense probably damaging 0.96
IGL02505:Chil6 APN 3 106,313,278 (GRCm39) missense probably benign
IGL03164:Chil6 APN 3 106,301,714 (GRCm39) missense probably benign 0.04
cold_cut UTSW 3 106,297,290 (GRCm39) missense probably damaging 1.00
R0409:Chil6 UTSW 3 106,311,492 (GRCm39) missense probably benign 0.44
R1761:Chil6 UTSW 3 106,301,654 (GRCm39) missense probably damaging 1.00
R1967:Chil6 UTSW 3 106,298,470 (GRCm39) missense possibly damaging 0.84
R2571:Chil6 UTSW 3 106,297,709 (GRCm39) nonsense probably null
R3024:Chil6 UTSW 3 106,296,086 (GRCm39) missense probably damaging 1.00
R3829:Chil6 UTSW 3 106,313,274 (GRCm39) missense probably benign 0.00
R4835:Chil6 UTSW 3 106,313,290 (GRCm39) nonsense probably null
R4851:Chil6 UTSW 3 106,297,244 (GRCm39) missense possibly damaging 0.61
R4948:Chil6 UTSW 3 106,295,988 (GRCm39) intron probably benign
R5244:Chil6 UTSW 3 106,297,290 (GRCm39) missense probably damaging 1.00
R5555:Chil6 UTSW 3 106,297,268 (GRCm39) missense possibly damaging 0.87
R5594:Chil6 UTSW 3 106,301,745 (GRCm39) splice site probably null
R5633:Chil6 UTSW 3 106,296,068 (GRCm39) missense probably damaging 1.00
R6194:Chil6 UTSW 3 106,312,192 (GRCm39) critical splice donor site probably null
R6587:Chil6 UTSW 3 106,312,197 (GRCm39) missense probably benign
R6613:Chil6 UTSW 3 106,297,191 (GRCm39) missense probably benign 0.25
R6641:Chil6 UTSW 3 106,296,240 (GRCm39) missense possibly damaging 0.61
R6651:Chil6 UTSW 3 106,311,576 (GRCm39) missense probably damaging 1.00
R7094:Chil6 UTSW 3 106,311,486 (GRCm39) missense probably damaging 0.96
R7161:Chil6 UTSW 3 106,301,728 (GRCm39) missense probably benign 0.01
R7653:Chil6 UTSW 3 106,301,641 (GRCm39) missense possibly damaging 0.82
R8802:Chil6 UTSW 3 106,312,208 (GRCm39) missense probably damaging 1.00
R9217:Chil6 UTSW 3 106,313,411 (GRCm39) start gained probably benign
R9584:Chil6 UTSW 3 106,301,672 (GRCm39) missense probably damaging 1.00
R9782:Chil6 UTSW 3 106,296,121 (GRCm39) nonsense probably null
X0026:Chil6 UTSW 3 106,296,284 (GRCm39) missense probably benign 0.02
X0064:Chil6 UTSW 3 106,311,635 (GRCm39) nonsense probably null
Predicted Primers PCR Primer
(F):5'- CTAGCATTTACCTTGTCGAATGAAG -3'
(R):5'- CCTGATGAAAGGCTCAGAGG -3'

Sequencing Primer
(F):5'- CTTTCCTTACATGCATCAGG -3'
(R):5'- AGGCTCAGAGGCAGATATTAATG -3'
Posted On 2016-06-06