Incidental Mutation 'R5026:Vmn2r16'
ID |
391339 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Vmn2r16
|
Ensembl Gene |
ENSMUSG00000092080 |
Gene Name |
vomeronasal 2, receptor 16 |
Synonyms |
EG384220 |
MMRRC Submission |
042617-MU
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.154)
|
Stock # |
R5026 (G1)
|
Quality Score |
225 |
Status
|
Validated
|
Chromosome |
5 |
Chromosomal Location |
109478247-109512347 bp(+) (GRCm39) |
Type of Mutation |
nonsense |
DNA Base Change (assembly) |
T to A
at 109508722 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Tyrosine to Stop codon
at position 483
(Y483*)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000127838
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000165180]
|
AlphaFold |
A0A3B2WCY4 |
Predicted Effect |
probably null
Transcript: ENSMUST00000165180
AA Change: Y483*
|
SMART Domains |
Protein: ENSMUSP00000127838 Gene: ENSMUSG00000092080 AA Change: Y483*
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
24 |
N/A |
INTRINSIC |
Pfam:ANF_receptor
|
76 |
425 |
2.3e-28 |
PFAM |
Pfam:NCD3G
|
509 |
563 |
8.2e-19 |
PFAM |
Pfam:7tm_3
|
596 |
831 |
3.5e-56 |
PFAM |
|
Meta Mutation Damage Score |
0.9755 |
Coding Region Coverage |
- 1x: 99.0%
- 3x: 98.2%
- 10x: 95.9%
- 20x: 90.7%
|
Validation Efficiency |
96% (88/92) |
Allele List at MGI |
|
Other mutations in this stock |
Total: 79 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Abca12 |
T |
C |
1: 71,356,383 (GRCm39) |
N608S |
probably benign |
Het |
Actg1 |
T |
C |
11: 120,237,784 (GRCm39) |
N7S |
probably damaging |
Het |
Adamtsl3 |
T |
A |
7: 82,225,262 (GRCm39) |
L357Q |
probably benign |
Het |
Ahnak |
A |
T |
19: 8,987,995 (GRCm39) |
Q3093L |
possibly damaging |
Het |
Ankrd16 |
T |
A |
2: 11,794,692 (GRCm39) |
V359E |
probably benign |
Het |
Ankrd40 |
T |
C |
11: 94,230,550 (GRCm39) |
|
probably benign |
Het |
Ano10 |
G |
A |
9: 122,101,625 (GRCm39) |
Q49* |
probably null |
Het |
Aoah |
A |
T |
13: 21,099,129 (GRCm39) |
D236V |
probably damaging |
Het |
Bin1 |
T |
C |
18: 32,552,983 (GRCm39) |
|
probably null |
Het |
Braf |
T |
C |
6: 39,665,221 (GRCm39) |
D49G |
probably benign |
Het |
Brsk1 |
A |
T |
7: 4,707,265 (GRCm39) |
R273W |
probably damaging |
Het |
C2cd3 |
T |
A |
7: 100,109,049 (GRCm39) |
M2259K |
possibly damaging |
Het |
Cabp1 |
T |
C |
5: 115,313,531 (GRCm39) |
N43D |
possibly damaging |
Het |
Ccar2 |
T |
A |
14: 70,379,951 (GRCm39) |
Q412L |
possibly damaging |
Het |
Cd4 |
T |
C |
6: 124,843,583 (GRCm39) |
T443A |
possibly damaging |
Het |
Cdh23 |
T |
A |
10: 60,140,627 (GRCm39) |
I3206F |
possibly damaging |
Het |
Ceacam9 |
A |
T |
7: 16,459,122 (GRCm39) |
|
probably null |
Het |
Chid1 |
T |
C |
7: 141,093,749 (GRCm39) |
D289G |
probably damaging |
Het |
Chmp6 |
T |
A |
11: 119,809,469 (GRCm39) |
L196Q |
probably damaging |
Het |
Cog8 |
A |
G |
8: 107,775,757 (GRCm39) |
S536P |
probably benign |
Het |
Dmxl2 |
A |
T |
9: 54,323,960 (GRCm39) |
S1141R |
probably damaging |
Het |
Dnah7a |
T |
G |
1: 53,701,657 (GRCm39) |
Y166S |
probably damaging |
Het |
Dnah7b |
G |
T |
1: 46,226,523 (GRCm39) |
W1318L |
probably damaging |
Het |
Ecd |
A |
G |
14: 20,387,098 (GRCm39) |
F212S |
probably damaging |
Het |
Entpd6 |
A |
T |
2: 150,605,564 (GRCm39) |
S265C |
probably damaging |
Het |
Epb41l2 |
A |
G |
10: 25,360,206 (GRCm39) |
T523A |
possibly damaging |
Het |
Focad |
T |
C |
4: 88,262,819 (GRCm39) |
S939P |
unknown |
Het |
Gjb3 |
A |
T |
4: 127,220,280 (GRCm39) |
V84D |
probably damaging |
Het |
Gm572 |
A |
T |
4: 148,739,301 (GRCm39) |
E43V |
possibly damaging |
Het |
Gm6185 |
T |
A |
1: 161,052,178 (GRCm39) |
|
noncoding transcript |
Het |
Gria1 |
T |
A |
11: 57,201,522 (GRCm39) |
C787S |
probably damaging |
Het |
Grpel2 |
A |
G |
18: 61,849,024 (GRCm39) |
L162P |
probably damaging |
Het |
Herc1 |
A |
G |
9: 66,393,408 (GRCm39) |
T4096A |
probably benign |
Het |
Hook3 |
A |
T |
8: 26,600,785 (GRCm39) |
M41K |
probably damaging |
Het |
Ifit1bl1 |
T |
C |
19: 34,571,293 (GRCm39) |
Y388C |
probably damaging |
Het |
Ighv3-4 |
A |
G |
12: 114,217,382 (GRCm39) |
Y70H |
probably benign |
Het |
Itm2c |
T |
C |
1: 85,834,213 (GRCm39) |
L176P |
probably damaging |
Het |
Lmtk3 |
G |
A |
7: 45,443,836 (GRCm39) |
|
probably benign |
Het |
Macf1 |
G |
A |
4: 123,333,287 (GRCm39) |
T2376I |
possibly damaging |
Het |
Map1a |
T |
G |
2: 121,138,019 (GRCm39) |
S2660A |
possibly damaging |
Het |
Mmrn2 |
A |
G |
14: 34,121,158 (GRCm39) |
H676R |
probably benign |
Het |
Nbeal1 |
A |
T |
1: 60,276,338 (GRCm39) |
K693M |
probably damaging |
Het |
Ndufa13 |
T |
A |
8: 70,347,920 (GRCm39) |
R49* |
probably null |
Het |
Neb |
T |
A |
2: 52,094,892 (GRCm39) |
T1115S |
possibly damaging |
Het |
Nvl |
C |
T |
1: 180,932,720 (GRCm39) |
R699H |
probably damaging |
Het |
Or10w1 |
A |
G |
19: 13,632,296 (GRCm39) |
I163V |
probably benign |
Het |
Or5d47 |
A |
T |
2: 87,804,364 (GRCm39) |
I215N |
probably damaging |
Het |
Or8b53 |
A |
G |
9: 38,667,041 (GRCm39) |
D19G |
probably benign |
Het |
Or8d2b |
A |
T |
9: 38,789,195 (GRCm39) |
H241L |
possibly damaging |
Het |
Piezo1 |
G |
T |
8: 123,213,557 (GRCm39) |
D1779E |
probably benign |
Het |
Prl8a9 |
A |
G |
13: 27,745,560 (GRCm39) |
S77P |
probably damaging |
Het |
Prune2 |
A |
T |
19: 17,176,506 (GRCm39) |
I2904F |
probably damaging |
Het |
Retreg1 |
T |
A |
15: 25,970,214 (GRCm39) |
S151T |
probably damaging |
Het |
Rnf213 |
A |
G |
11: 119,327,590 (GRCm39) |
D1859G |
probably damaging |
Het |
Rnf39 |
T |
C |
17: 37,256,426 (GRCm39) |
F173L |
probably benign |
Het |
Rspry1 |
T |
A |
8: 95,376,931 (GRCm39) |
N371K |
probably damaging |
Het |
Samd9l |
T |
A |
6: 3,375,284 (GRCm39) |
D659V |
possibly damaging |
Het |
Sez6 |
T |
A |
11: 77,859,815 (GRCm39) |
F378Y |
probably damaging |
Het |
Slc22a19 |
G |
A |
19: 7,651,737 (GRCm39) |
T490M |
probably benign |
Het |
Slit2 |
A |
T |
5: 48,414,147 (GRCm39) |
N917I |
probably damaging |
Het |
Smg1 |
T |
A |
7: 117,792,768 (GRCm39) |
|
probably benign |
Het |
Tes |
T |
C |
6: 17,096,339 (GRCm39) |
V24A |
probably benign |
Het |
Tial1 |
C |
T |
7: 128,050,120 (GRCm39) |
E82K |
probably damaging |
Het |
Tmem94 |
G |
A |
11: 115,683,930 (GRCm39) |
C750Y |
probably damaging |
Het |
Tmppe |
T |
A |
9: 114,234,887 (GRCm39) |
N395K |
possibly damaging |
Het |
Tnn |
T |
C |
1: 159,973,707 (GRCm39) |
H220R |
probably benign |
Het |
Trappc10 |
T |
C |
10: 78,040,122 (GRCm39) |
T610A |
possibly damaging |
Het |
Trmt1l |
T |
A |
1: 151,316,627 (GRCm39) |
M196K |
probably damaging |
Het |
Trpv4 |
T |
C |
5: 114,760,715 (GRCm39) |
*872W |
probably null |
Het |
Ttn |
T |
C |
2: 76,579,353 (GRCm39) |
T23847A |
probably benign |
Het |
Ube4b |
T |
A |
4: 149,445,022 (GRCm39) |
L440F |
probably damaging |
Het |
Ugt1a5 |
C |
G |
1: 88,093,963 (GRCm39) |
R64G |
probably benign |
Het |
Unc13c |
T |
A |
9: 73,838,185 (GRCm39) |
T889S |
possibly damaging |
Het |
Vmn1r215 |
C |
T |
13: 23,260,449 (GRCm39) |
T163I |
probably benign |
Het |
Wdr47 |
T |
A |
3: 108,525,838 (GRCm39) |
C120* |
probably null |
Het |
Zc3h6 |
G |
A |
2: 128,859,229 (GRCm39) |
V1087I |
probably benign |
Het |
Zfp423 |
T |
C |
8: 88,507,302 (GRCm39) |
H889R |
probably damaging |
Het |
Zfp825 |
G |
T |
13: 74,629,196 (GRCm39) |
H107N |
probably benign |
Het |
Zfp945 |
T |
C |
17: 23,069,859 (GRCm39) |
H680R |
probably damaging |
Het |
|
Other mutations in Vmn2r16 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01116:Vmn2r16
|
APN |
5 |
109,488,294 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01374:Vmn2r16
|
APN |
5 |
109,478,283 (GRCm39) |
missense |
probably benign |
0.00 |
IGL01391:Vmn2r16
|
APN |
5 |
109,511,627 (GRCm39) |
missense |
possibly damaging |
0.50 |
IGL01419:Vmn2r16
|
APN |
5 |
109,510,267 (GRCm39) |
splice site |
probably benign |
|
IGL01634:Vmn2r16
|
APN |
5 |
109,488,177 (GRCm39) |
missense |
probably benign |
0.00 |
IGL01845:Vmn2r16
|
APN |
5 |
109,511,762 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01875:Vmn2r16
|
APN |
5 |
109,478,277 (GRCm39) |
missense |
probably benign |
0.01 |
IGL01910:Vmn2r16
|
APN |
5 |
109,487,951 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02217:Vmn2r16
|
APN |
5 |
109,487,676 (GRCm39) |
missense |
probably damaging |
0.98 |
IGL02327:Vmn2r16
|
APN |
5 |
109,487,987 (GRCm39) |
missense |
probably benign |
0.01 |
IGL02491:Vmn2r16
|
APN |
5 |
109,487,703 (GRCm39) |
nonsense |
probably null |
|
IGL02531:Vmn2r16
|
APN |
5 |
109,488,134 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL02680:Vmn2r16
|
APN |
5 |
109,487,948 (GRCm39) |
missense |
probably benign |
0.44 |
IGL02884:Vmn2r16
|
APN |
5 |
109,508,757 (GRCm39) |
missense |
possibly damaging |
0.94 |
IGL03084:Vmn2r16
|
APN |
5 |
109,478,292 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL03096:Vmn2r16
|
APN |
5 |
109,487,751 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL03355:Vmn2r16
|
APN |
5 |
109,511,580 (GRCm39) |
missense |
possibly damaging |
0.74 |
R0280:Vmn2r16
|
UTSW |
5 |
109,488,005 (GRCm39) |
missense |
possibly damaging |
0.88 |
R0594:Vmn2r16
|
UTSW |
5 |
109,511,762 (GRCm39) |
missense |
probably damaging |
1.00 |
R1016:Vmn2r16
|
UTSW |
5 |
109,487,754 (GRCm39) |
missense |
probably damaging |
1.00 |
R1109:Vmn2r16
|
UTSW |
5 |
109,487,652 (GRCm39) |
missense |
probably damaging |
0.98 |
R1248:Vmn2r16
|
UTSW |
5 |
109,508,643 (GRCm39) |
missense |
probably benign |
0.10 |
R1626:Vmn2r16
|
UTSW |
5 |
109,511,443 (GRCm39) |
missense |
probably damaging |
1.00 |
R1909:Vmn2r16
|
UTSW |
5 |
109,511,853 (GRCm39) |
missense |
probably benign |
0.01 |
R1929:Vmn2r16
|
UTSW |
5 |
109,487,124 (GRCm39) |
missense |
possibly damaging |
0.92 |
R1982:Vmn2r16
|
UTSW |
5 |
109,511,890 (GRCm39) |
missense |
probably benign |
0.01 |
R3038:Vmn2r16
|
UTSW |
5 |
109,487,199 (GRCm39) |
missense |
probably damaging |
1.00 |
R3437:Vmn2r16
|
UTSW |
5 |
109,478,362 (GRCm39) |
missense |
probably damaging |
0.99 |
R3734:Vmn2r16
|
UTSW |
5 |
109,478,280 (GRCm39) |
missense |
probably benign |
0.11 |
R3820:Vmn2r16
|
UTSW |
5 |
109,510,143 (GRCm39) |
missense |
probably benign |
0.36 |
R3873:Vmn2r16
|
UTSW |
5 |
109,488,177 (GRCm39) |
missense |
probably benign |
0.33 |
R4165:Vmn2r16
|
UTSW |
5 |
109,478,427 (GRCm39) |
missense |
possibly damaging |
0.80 |
R4373:Vmn2r16
|
UTSW |
5 |
109,511,667 (GRCm39) |
missense |
probably damaging |
1.00 |
R4575:Vmn2r16
|
UTSW |
5 |
109,511,665 (GRCm39) |
missense |
possibly damaging |
0.81 |
R4576:Vmn2r16
|
UTSW |
5 |
109,511,665 (GRCm39) |
missense |
possibly damaging |
0.81 |
R4578:Vmn2r16
|
UTSW |
5 |
109,511,665 (GRCm39) |
missense |
possibly damaging |
0.81 |
R4637:Vmn2r16
|
UTSW |
5 |
109,478,280 (GRCm39) |
missense |
probably benign |
0.00 |
R4696:Vmn2r16
|
UTSW |
5 |
109,487,168 (GRCm39) |
missense |
probably benign |
0.01 |
R5180:Vmn2r16
|
UTSW |
5 |
109,478,391 (GRCm39) |
missense |
probably benign |
0.01 |
R5433:Vmn2r16
|
UTSW |
5 |
109,511,708 (GRCm39) |
missense |
probably damaging |
1.00 |
R5955:Vmn2r16
|
UTSW |
5 |
109,511,613 (GRCm39) |
missense |
possibly damaging |
0.78 |
R5958:Vmn2r16
|
UTSW |
5 |
109,510,153 (GRCm39) |
missense |
possibly damaging |
0.81 |
R6353:Vmn2r16
|
UTSW |
5 |
109,488,119 (GRCm39) |
missense |
probably benign |
0.33 |
R6389:Vmn2r16
|
UTSW |
5 |
109,478,344 (GRCm39) |
missense |
probably benign |
0.19 |
R6819:Vmn2r16
|
UTSW |
5 |
109,488,412 (GRCm39) |
missense |
probably benign |
0.04 |
R6994:Vmn2r16
|
UTSW |
5 |
109,487,969 (GRCm39) |
missense |
probably damaging |
1.00 |
R7061:Vmn2r16
|
UTSW |
5 |
109,511,620 (GRCm39) |
missense |
probably damaging |
0.99 |
R7063:Vmn2r16
|
UTSW |
5 |
109,511,650 (GRCm39) |
missense |
probably damaging |
1.00 |
R7220:Vmn2r16
|
UTSW |
5 |
109,508,772 (GRCm39) |
missense |
probably damaging |
0.97 |
R7268:Vmn2r16
|
UTSW |
5 |
109,488,331 (GRCm39) |
nonsense |
probably null |
|
R7420:Vmn2r16
|
UTSW |
5 |
109,511,736 (GRCm39) |
missense |
probably damaging |
0.96 |
R7591:Vmn2r16
|
UTSW |
5 |
109,510,223 (GRCm39) |
missense |
probably damaging |
0.99 |
R7644:Vmn2r16
|
UTSW |
5 |
109,487,837 (GRCm39) |
missense |
probably damaging |
1.00 |
R7939:Vmn2r16
|
UTSW |
5 |
109,487,705 (GRCm39) |
missense |
possibly damaging |
0.79 |
R7977:Vmn2r16
|
UTSW |
5 |
109,488,015 (GRCm39) |
missense |
probably damaging |
1.00 |
R7987:Vmn2r16
|
UTSW |
5 |
109,488,015 (GRCm39) |
missense |
probably damaging |
1.00 |
R8023:Vmn2r16
|
UTSW |
5 |
109,488,272 (GRCm39) |
nonsense |
probably null |
|
R8427:Vmn2r16
|
UTSW |
5 |
109,488,138 (GRCm39) |
missense |
probably benign |
0.03 |
R8436:Vmn2r16
|
UTSW |
5 |
109,511,649 (GRCm39) |
missense |
probably damaging |
1.00 |
R8475:Vmn2r16
|
UTSW |
5 |
109,487,073 (GRCm39) |
missense |
probably benign |
0.01 |
R8554:Vmn2r16
|
UTSW |
5 |
109,511,997 (GRCm39) |
missense |
probably benign |
0.13 |
R8771:Vmn2r16
|
UTSW |
5 |
109,488,231 (GRCm39) |
missense |
probably benign |
0.00 |
R8774:Vmn2r16
|
UTSW |
5 |
109,488,231 (GRCm39) |
missense |
probably benign |
0.00 |
R8774-TAIL:Vmn2r16
|
UTSW |
5 |
109,488,231 (GRCm39) |
missense |
probably benign |
0.00 |
R8775:Vmn2r16
|
UTSW |
5 |
109,488,231 (GRCm39) |
missense |
probably benign |
0.00 |
R8775-TAIL:Vmn2r16
|
UTSW |
5 |
109,488,231 (GRCm39) |
missense |
probably benign |
0.00 |
R8777:Vmn2r16
|
UTSW |
5 |
109,488,231 (GRCm39) |
missense |
probably benign |
0.00 |
R8777-TAIL:Vmn2r16
|
UTSW |
5 |
109,488,231 (GRCm39) |
missense |
probably benign |
0.00 |
R8825:Vmn2r16
|
UTSW |
5 |
109,487,019 (GRCm39) |
missense |
probably benign |
0.41 |
R8865:Vmn2r16
|
UTSW |
5 |
109,487,910 (GRCm39) |
missense |
probably benign |
0.33 |
R8900:Vmn2r16
|
UTSW |
5 |
109,511,619 (GRCm39) |
missense |
probably benign |
0.04 |
R9365:Vmn2r16
|
UTSW |
5 |
109,488,064 (GRCm39) |
missense |
probably damaging |
0.99 |
R9683:Vmn2r16
|
UTSW |
5 |
109,511,677 (GRCm39) |
missense |
probably damaging |
1.00 |
X0027:Vmn2r16
|
UTSW |
5 |
109,487,175 (GRCm39) |
missense |
probably damaging |
1.00 |
Z1088:Vmn2r16
|
UTSW |
5 |
109,511,779 (GRCm39) |
frame shift |
probably null |
|
Z1088:Vmn2r16
|
UTSW |
5 |
109,488,381 (GRCm39) |
missense |
probably benign |
0.03 |
Z1177:Vmn2r16
|
UTSW |
5 |
109,487,864 (GRCm39) |
missense |
possibly damaging |
0.79 |
|
Predicted Primers |
PCR Primer
(F):5'- TATCTAATGAAGCATCTCATTTAGGTG -3'
(R):5'- AATGTGTTTCTGTACTGTGGATTGAA -3'
Sequencing Primer
(F):5'- GAAGCATCTCATTTAGGTGGCTTCC -3'
(R):5'- TCCAATAGCTGACTGTGAGC -3'
|
Posted On |
2016-06-06 |