Incidental Mutation 'IGL02799:Vmn2r62'
ID 392272
Institutional Source Beutler Lab
Gene Symbol Vmn2r62
Ensembl Gene ENSMUSG00000091926
Gene Name vomeronasal 2, receptor 62
Synonyms
Accession Numbers
Essential gene? Probably non essential (E-score: 0.127) question?
Stock # IGL02799 (G1)
Quality Score 81
Status Validated
Chromosome 7
Chromosomal Location 42413862-42442920 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 42437396 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Serine to Proline at position 363 (S363P)
Ref Sequence ENSEMBL: ENSMUSP00000130557 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000169130]
AlphaFold K7N712
Predicted Effect possibly damaging
Transcript: ENSMUST00000169130
AA Change: S363P

PolyPhen 2 Score 0.650 (Sensitivity: 0.87; Specificity: 0.91)
SMART Domains Protein: ENSMUSP00000130557
Gene: ENSMUSG00000091926
AA Change: S363P

DomainStartEndE-ValueType
signal peptide 1 18 N/A INTRINSIC
Pfam:ANF_receptor 77 471 2.1e-43 PFAM
Pfam:NCD3G 514 567 2.7e-23 PFAM
Pfam:7tm_3 600 835 6e-52 PFAM
Meta Mutation Damage Score 0.1795 question?
Coding Region Coverage
  • 1x: 0.0%
  • 3x: 0.0%
  • 10x: 0.0%
  • 20x: 0.0%
Validation Efficiency 99% (67/68)
Allele List at MGI
Other mutations in this stock
Total: 72 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Add2 A G 6: 86,083,234 (GRCm39) N444S possibly damaging Het
Atp2b2 A T 6: 113,739,813 (GRCm39) Y823* probably null Het
Atp2c1 A C 9: 105,290,242 (GRCm39) probably benign Het
Capns1 A T 7: 29,891,644 (GRCm39) D133E probably benign Het
Cast A G 13: 74,884,871 (GRCm39) V361A probably damaging Het
Cd69 G A 6: 129,245,223 (GRCm39) probably benign Het
Celsr2 T A 3: 108,321,378 (GRCm39) D478V probably damaging Het
Cenpf T C 1: 189,391,849 (GRCm39) E661G probably damaging Het
Chrna1 A G 2: 73,404,985 (GRCm39) probably benign Het
Clec5a C A 6: 40,554,983 (GRCm39) V138F probably damaging Het
Ctsj T A 13: 61,151,634 (GRCm39) I95F probably benign Het
Dcaf1 T A 9: 106,735,139 (GRCm39) S696T probably benign Het
Dcp1a T C 14: 30,241,636 (GRCm39) probably null Het
Dnajc14 C T 10: 128,642,725 (GRCm39) P216S possibly damaging Het
Dst T C 1: 34,218,930 (GRCm39) I1790T possibly damaging Het
Ehmt1 A T 2: 24,705,818 (GRCm39) H789Q probably damaging Het
Exoc7 A T 11: 116,192,007 (GRCm39) L188Q probably damaging Het
Faap100 A G 11: 120,261,561 (GRCm39) L823P probably damaging Het
Fdxacb1 T A 9: 50,683,896 (GRCm39) S620T probably benign Het
Fhl2 C T 1: 43,167,562 (GRCm39) R177Q probably benign Het
Gars1 C A 6: 55,040,084 (GRCm39) T337K probably damaging Het
Ggta1 A T 2: 35,312,211 (GRCm39) F56I probably damaging Het
Gm10715 A C 9: 3,038,062 (GRCm39) probably benign Het
Gpr108 T A 17: 57,544,482 (GRCm39) I343F probably damaging Het
Gpr12 T A 5: 146,520,629 (GRCm39) I98F possibly damaging Het
Hk2 A G 6: 82,737,219 (GRCm39) L3P probably damaging Het
Imp4 C A 1: 34,479,258 (GRCm39) probably benign Het
Insrr G A 3: 87,720,888 (GRCm39) V1049M probably damaging Het
Klhl24 T C 16: 19,933,331 (GRCm39) V314A probably damaging Het
Krt32 A T 11: 99,978,733 (GRCm39) V107D possibly damaging Het
Krtap5-1 G A 7: 141,850,242 (GRCm39) Q189* probably null Het
Lrrc9 A G 12: 72,553,178 (GRCm39) E1360G probably damaging Het
Mdc1 G T 17: 36,157,083 (GRCm39) L163F possibly damaging Het
Mroh1 T G 15: 76,276,661 (GRCm39) probably null Het
Myh8 A G 11: 67,192,418 (GRCm39) probably benign Het
Ndufab1 A T 7: 121,692,949 (GRCm39) probably benign Het
Nek3 A G 8: 22,648,735 (GRCm39) probably benign Het
Ngly1 A T 14: 16,260,636 (GRCm38) I107L probably benign Het
Nkain4 A T 2: 180,577,728 (GRCm39) probably null Het
Nsd2 T A 5: 34,022,132 (GRCm39) probably benign Het
Or4n4 A G 14: 50,518,801 (GRCm39) I303T probably benign Het
Or5e1 A T 7: 108,354,830 (GRCm39) M256L probably benign Het
Or5t9 A T 2: 86,659,300 (GRCm39) H68L probably damaging Het
Or7e166 T A 9: 19,624,314 (GRCm39) Y64N probably damaging Het
Or8b12 T A 9: 37,657,805 (GRCm39) I125N probably damaging Het
Pcnt G A 10: 76,248,417 (GRCm39) Q901* probably null Het
Pctp C A 11: 89,881,913 (GRCm39) W81C probably damaging Het
Pik3r5 A T 11: 68,386,773 (GRCm39) I801F probably damaging Het
Ptprj A T 2: 90,299,942 (GRCm39) N193K probably benign Het
Rab11fip1 A T 8: 27,642,788 (GRCm39) D670E probably benign Het
Racgap1 T C 15: 99,530,628 (GRCm39) K201E probably benign Het
Ranbp2 T C 10: 58,316,086 (GRCm39) F2269L probably damaging Het
Rint1 C A 5: 24,024,478 (GRCm39) A760D possibly damaging Het
Ryr2 G A 13: 11,680,848 (GRCm39) P3166S probably damaging Het
Snap29 A G 16: 17,240,367 (GRCm39) N158D probably benign Het
Speer4c1 A C 5: 15,919,214 (GRCm39) probably benign Het
St6galnac1 G T 11: 116,657,473 (GRCm39) probably benign Het
Strc G A 2: 121,209,717 (GRCm39) T202I probably damaging Het
Stxbp4 A G 11: 90,385,426 (GRCm39) probably null Het
Syne1 A T 10: 5,309,059 (GRCm39) M650K probably damaging Het
Tbc1d2b C T 9: 90,105,487 (GRCm39) probably benign Het
Tcfl5 A T 2: 180,280,419 (GRCm39) I328N possibly damaging Het
Tenm2 A G 11: 36,164,235 (GRCm39) Y337H probably damaging Het
Tgfbr2 T C 9: 115,939,204 (GRCm39) K233E possibly damaging Het
Tnk2 T C 16: 32,484,699 (GRCm39) probably benign Het
Trbv13-2 A G 6: 41,098,471 (GRCm39) probably benign Het
Tut4 T C 4: 108,370,725 (GRCm39) Y875H probably benign Het
Usp6nl T A 2: 6,432,360 (GRCm39) probably benign Het
Vnn3 T C 10: 23,727,869 (GRCm39) I93T possibly damaging Het
Ylpm1 A G 12: 85,091,258 (GRCm39) D1108G probably damaging Het
Zbtb17 G A 4: 141,190,691 (GRCm39) G170S probably benign Het
Zfyve26 T C 12: 79,320,084 (GRCm39) E1087G probably benign Het
Other mutations in Vmn2r62
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01726:Vmn2r62 APN 7 42,414,526 (GRCm39) missense probably damaging 1.00
IGL01900:Vmn2r62 APN 7 42,438,495 (GRCm39) missense probably benign 0.01
IGL02551:Vmn2r62 APN 7 42,437,930 (GRCm39) missense probably benign 0.02
R0144:Vmn2r62 UTSW 7 42,438,440 (GRCm39) missense probably damaging 1.00
R1396:Vmn2r62 UTSW 7 42,414,261 (GRCm39) missense probably damaging 0.99
R1846:Vmn2r62 UTSW 7 42,438,546 (GRCm39) missense probably damaging 0.97
R3738:Vmn2r62 UTSW 7 42,437,311 (GRCm39) missense probably benign 0.00
R4519:Vmn2r62 UTSW 7 42,413,957 (GRCm39) missense probably damaging 1.00
R5138:Vmn2r62 UTSW 7 42,414,240 (GRCm39) missense possibly damaging 0.90
R5381:Vmn2r62 UTSW 7 42,437,219 (GRCm39) missense probably benign 0.43
R6855:Vmn2r62 UTSW 7 42,438,412 (GRCm39) missense probably benign 0.00
R6872:Vmn2r62 UTSW 7 42,438,412 (GRCm39) missense probably benign 0.00
R6968:Vmn2r62 UTSW 7 42,437,866 (GRCm39) missense probably benign 0.18
R7030:Vmn2r62 UTSW 7 42,438,473 (GRCm39) missense possibly damaging 0.82
R7067:Vmn2r62 UTSW 7 42,414,302 (GRCm39) missense probably benign 0.44
R7148:Vmn2r62 UTSW 7 42,414,640 (GRCm39) missense probably benign 0.02
R7305:Vmn2r62 UTSW 7 42,414,235 (GRCm39) missense possibly damaging 0.76
R7493:Vmn2r62 UTSW 7 42,437,316 (GRCm39) missense possibly damaging 0.81
R7583:Vmn2r62 UTSW 7 42,437,466 (GRCm39) missense possibly damaging 0.76
R7593:Vmn2r62 UTSW 7 42,437,213 (GRCm39) missense possibly damaging 0.55
R7851:Vmn2r62 UTSW 7 42,438,539 (GRCm39) missense probably benign 0.00
R7974:Vmn2r62 UTSW 7 42,437,281 (GRCm39) missense probably damaging 1.00
R7974:Vmn2r62 UTSW 7 42,414,031 (GRCm39) missense probably damaging 0.98
R8085:Vmn2r62 UTSW 7 42,437,270 (GRCm39) missense probably damaging 0.99
R8514:Vmn2r62 UTSW 7 42,413,992 (GRCm39) missense probably benign 0.00
R8935:Vmn2r62 UTSW 7 42,437,791 (GRCm39) missense probably benign
R9053:Vmn2r62 UTSW 7 42,413,920 (GRCm39) missense
Predicted Primers PCR Primer
(F):5'- CCGTCTCCATTGGCATATGG -3'
(R):5'- GAAAGTCTGGGTCTTGAACTCTC -3'

Sequencing Primer
(F):5'- CTCCATTGGCATATGGTTGTGTC -3'
(R):5'- AAGTCTGGGTCTTGAACTCTCAATGG -3'
Posted On 2016-06-09