Incidental Mutation 'R5120:Zmym1'
ID 392913
Institutional Source Beutler Lab
Gene Symbol Zmym1
Ensembl Gene ENSMUSG00000043872
Gene Name zinc finger, MYM domain containing 1
Synonyms 5830412B09Rik
MMRRC Submission 042708-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.211) question?
Stock # R5120 (G1)
Quality Score 225
Status Validated
Chromosome 4
Chromosomal Location 126940887-126954945 bp(-) (GRCm39)
Type of Mutation splice site
DNA Base Change (assembly) T to C at 126945230 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000101708 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000055013] [ENSMUST00000055013] [ENSMUST00000055013] [ENSMUST00000055013] [ENSMUST00000055013] [ENSMUST00000106099] [ENSMUST00000106099] [ENSMUST00000106099] [ENSMUST00000106099] [ENSMUST00000106099] [ENSMUST00000106102] [ENSMUST00000106102] [ENSMUST00000106102] [ENSMUST00000106102] [ENSMUST00000136186]
AlphaFold Q3TJB1
Predicted Effect probably null
Transcript: ENSMUST00000055013
SMART Domains Protein: ENSMUSP00000050669
Gene: ENSMUSG00000043872

DomainStartEndE-ValueType
Pfam:zf-FCS 6 46 2.4e-8 PFAM
Pfam:zf-FCS 53 96 1.6e-10 PFAM
low complexity region 155 168 N/A INTRINSIC
low complexity region 229 243 N/A INTRINSIC
Pfam:DUF4371 335 569 4.9e-55 PFAM
Pfam:Dimer_Tnp_hAT 870 959 5.1e-18 PFAM
Predicted Effect probably null
Transcript: ENSMUST00000055013
SMART Domains Protein: ENSMUSP00000050669
Gene: ENSMUSG00000043872

DomainStartEndE-ValueType
Pfam:zf-FCS 6 46 2.4e-8 PFAM
Pfam:zf-FCS 53 96 1.6e-10 PFAM
low complexity region 155 168 N/A INTRINSIC
low complexity region 229 243 N/A INTRINSIC
Pfam:DUF4371 335 569 4.9e-55 PFAM
Pfam:Dimer_Tnp_hAT 870 959 5.1e-18 PFAM
Predicted Effect probably null
Transcript: ENSMUST00000055013
SMART Domains Protein: ENSMUSP00000050669
Gene: ENSMUSG00000043872

DomainStartEndE-ValueType
Pfam:zf-FCS 6 46 2.4e-8 PFAM
Pfam:zf-FCS 53 96 1.6e-10 PFAM
low complexity region 155 168 N/A INTRINSIC
low complexity region 229 243 N/A INTRINSIC
Pfam:DUF4371 335 569 4.9e-55 PFAM
Pfam:Dimer_Tnp_hAT 870 959 5.1e-18 PFAM
Predicted Effect probably null
Transcript: ENSMUST00000055013
SMART Domains Protein: ENSMUSP00000050669
Gene: ENSMUSG00000043872

DomainStartEndE-ValueType
Pfam:zf-FCS 6 46 2.4e-8 PFAM
Pfam:zf-FCS 53 96 1.6e-10 PFAM
low complexity region 155 168 N/A INTRINSIC
low complexity region 229 243 N/A INTRINSIC
Pfam:DUF4371 335 569 4.9e-55 PFAM
Pfam:Dimer_Tnp_hAT 870 959 5.1e-18 PFAM
Predicted Effect probably null
Transcript: ENSMUST00000055013
SMART Domains Protein: ENSMUSP00000050669
Gene: ENSMUSG00000043872

DomainStartEndE-ValueType
Pfam:zf-FCS 6 46 2.4e-8 PFAM
Pfam:zf-FCS 53 96 1.6e-10 PFAM
low complexity region 155 168 N/A INTRINSIC
low complexity region 229 243 N/A INTRINSIC
Pfam:DUF4371 335 569 4.9e-55 PFAM
Pfam:Dimer_Tnp_hAT 870 959 5.1e-18 PFAM
Predicted Effect probably null
Transcript: ENSMUST00000106099
SMART Domains Protein: ENSMUSP00000101705
Gene: ENSMUSG00000043872

DomainStartEndE-ValueType
Pfam:zf-FCS 6 46 3.3e-9 PFAM
Pfam:zf-FCS 53 96 4.6e-10 PFAM
low complexity region 155 168 N/A INTRINSIC
Pfam:DUF4371 237 471 2.8e-52 PFAM
Pfam:Dimer_Tnp_hAT 772 861 5.3e-18 PFAM
Predicted Effect probably null
Transcript: ENSMUST00000106099
SMART Domains Protein: ENSMUSP00000101705
Gene: ENSMUSG00000043872

DomainStartEndE-ValueType
Pfam:zf-FCS 6 46 3.3e-9 PFAM
Pfam:zf-FCS 53 96 4.6e-10 PFAM
low complexity region 155 168 N/A INTRINSIC
Pfam:DUF4371 237 471 2.8e-52 PFAM
Pfam:Dimer_Tnp_hAT 772 861 5.3e-18 PFAM
Predicted Effect probably null
Transcript: ENSMUST00000106099
SMART Domains Protein: ENSMUSP00000101705
Gene: ENSMUSG00000043872

DomainStartEndE-ValueType
Pfam:zf-FCS 6 46 3.3e-9 PFAM
Pfam:zf-FCS 53 96 4.6e-10 PFAM
low complexity region 155 168 N/A INTRINSIC
Pfam:DUF4371 237 471 2.8e-52 PFAM
Pfam:Dimer_Tnp_hAT 772 861 5.3e-18 PFAM
Predicted Effect probably null
Transcript: ENSMUST00000106099
SMART Domains Protein: ENSMUSP00000101705
Gene: ENSMUSG00000043872

DomainStartEndE-ValueType
Pfam:zf-FCS 6 46 3.3e-9 PFAM
Pfam:zf-FCS 53 96 4.6e-10 PFAM
low complexity region 155 168 N/A INTRINSIC
Pfam:DUF4371 237 471 2.8e-52 PFAM
Pfam:Dimer_Tnp_hAT 772 861 5.3e-18 PFAM
Predicted Effect probably null
Transcript: ENSMUST00000106099
SMART Domains Protein: ENSMUSP00000101705
Gene: ENSMUSG00000043872

DomainStartEndE-ValueType
Pfam:zf-FCS 6 46 3.3e-9 PFAM
Pfam:zf-FCS 53 96 4.6e-10 PFAM
low complexity region 155 168 N/A INTRINSIC
Pfam:DUF4371 237 471 2.8e-52 PFAM
Pfam:Dimer_Tnp_hAT 772 861 5.3e-18 PFAM
Predicted Effect probably null
Transcript: ENSMUST00000106102
SMART Domains Protein: ENSMUSP00000101708
Gene: ENSMUSG00000043872

DomainStartEndE-ValueType
Pfam:zf-FCS 6 46 7.8e-9 PFAM
Pfam:zf-FCS 53 96 1.1e-9 PFAM
low complexity region 155 168 N/A INTRINSIC
low complexity region 229 243 N/A INTRINSIC
Pfam:DUF4371 335 569 7.4e-52 PFAM
Pfam:Dimer_Tnp_hAT 870 959 1.7e-17 PFAM
Predicted Effect probably null
Transcript: ENSMUST00000106102
SMART Domains Protein: ENSMUSP00000101708
Gene: ENSMUSG00000043872

DomainStartEndE-ValueType
Pfam:zf-FCS 6 46 7.8e-9 PFAM
Pfam:zf-FCS 53 96 1.1e-9 PFAM
low complexity region 155 168 N/A INTRINSIC
low complexity region 229 243 N/A INTRINSIC
Pfam:DUF4371 335 569 7.4e-52 PFAM
Pfam:Dimer_Tnp_hAT 870 959 1.7e-17 PFAM
Predicted Effect probably null
Transcript: ENSMUST00000106102
SMART Domains Protein: ENSMUSP00000101708
Gene: ENSMUSG00000043872

DomainStartEndE-ValueType
Pfam:zf-FCS 6 46 7.8e-9 PFAM
Pfam:zf-FCS 53 96 1.1e-9 PFAM
low complexity region 155 168 N/A INTRINSIC
low complexity region 229 243 N/A INTRINSIC
Pfam:DUF4371 335 569 7.4e-52 PFAM
Pfam:Dimer_Tnp_hAT 870 959 1.7e-17 PFAM
Predicted Effect probably null
Transcript: ENSMUST00000106102
SMART Domains Protein: ENSMUSP00000101708
Gene: ENSMUSG00000043872

DomainStartEndE-ValueType
Pfam:zf-FCS 6 46 7.8e-9 PFAM
Pfam:zf-FCS 53 96 1.1e-9 PFAM
low complexity region 155 168 N/A INTRINSIC
low complexity region 229 243 N/A INTRINSIC
Pfam:DUF4371 335 569 7.4e-52 PFAM
Pfam:Dimer_Tnp_hAT 870 959 1.7e-17 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000117934
Predicted Effect noncoding transcript
Transcript: ENSMUST00000119262
Predicted Effect noncoding transcript
Transcript: ENSMUST00000124429
Predicted Effect noncoding transcript
Transcript: ENSMUST00000152607
Predicted Effect noncoding transcript
Transcript: ENSMUST00000140605
Predicted Effect noncoding transcript
Transcript: ENSMUST00000137236
Predicted Effect probably benign
Transcript: ENSMUST00000136186
SMART Domains Protein: ENSMUSP00000120772
Gene: ENSMUSG00000043872

DomainStartEndE-ValueType
Pfam:zf-FCS 6 46 1.5e-10 PFAM
Meta Mutation Damage Score 0.9755 question?
Coding Region Coverage
  • 1x: 99.1%
  • 3x: 98.2%
  • 10x: 95.8%
  • 20x: 90.6%
Validation Efficiency 100% (97/97)
Allele List at MGI
Other mutations in this stock
Total: 84 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
2310033P09Rik A G 11: 59,101,061 (GRCm39) H225R probably benign Het
Abcc9 T A 6: 142,602,344 (GRCm39) I690F probably benign Het
Acp4 A T 7: 43,906,395 (GRCm39) D52E probably damaging Het
Adam17 T C 12: 21,393,020 (GRCm39) probably benign Het
Adamts15 T C 9: 30,832,872 (GRCm39) E221G probably damaging Het
Aoc2 A G 11: 101,216,540 (GRCm39) T208A probably benign Het
Apoa4 T G 9: 46,154,035 (GRCm39) I212S probably damaging Het
Bptf A T 11: 106,964,211 (GRCm39) M1598K probably damaging Het
Camsap3 G A 8: 3,650,680 (GRCm39) R209Q probably damaging Het
Ccdc171 C A 4: 83,476,763 (GRCm39) probably benign Het
Celsr2 G C 3: 108,300,436 (GRCm39) P2875A probably benign Het
Cenpb A G 2: 131,021,738 (GRCm39) V20A probably benign Het
Cfap61 A T 2: 145,985,080 (GRCm39) K975* probably null Het
Cfhr4 T C 1: 139,680,841 (GRCm39) S226G probably benign Het
Col9a2 G T 4: 120,896,969 (GRCm39) A20S unknown Het
Crnn A T 3: 93,056,203 (GRCm39) I330F probably benign Het
Csf3r C A 4: 125,929,620 (GRCm39) P381Q probably benign Het
Csmd3 G A 15: 48,536,891 (GRCm39) Q104* probably null Het
Ctnna1 G A 18: 35,315,607 (GRCm39) probably null Het
Cwf19l2 C T 9: 3,418,761 (GRCm39) Q183* probably null Het
Ddx60 T C 8: 62,398,940 (GRCm39) Y220H probably benign Het
Dhh T C 15: 98,796,038 (GRCm39) Q39R probably benign Het
Dynlrb2 T A 8: 117,242,437 (GRCm39) I89N possibly damaging Het
Dytn T C 1: 63,662,202 (GRCm39) E645G probably benign Het
Efcab7 A G 4: 99,754,688 (GRCm39) T287A probably damaging Het
Eogt A G 6: 97,111,276 (GRCm39) V195A probably benign Het
Ep400 G T 5: 110,904,224 (GRCm39) P125Q probably damaging Het
Fasn A G 11: 120,702,217 (GRCm39) V1815A probably benign Het
Gm5866 T C 5: 52,740,224 (GRCm39) noncoding transcript Het
Gm8674 C A 13: 50,055,984 (GRCm39) noncoding transcript Het
Gpat4 G T 8: 23,670,218 (GRCm39) H270Q possibly damaging Het
Grik5 A G 7: 24,710,065 (GRCm39) L890P probably damaging Het
Gsap A G 5: 21,474,934 (GRCm39) N500S probably damaging Het
H2-M10.1 T C 17: 36,636,048 (GRCm39) D173G probably benign Het
Igfn1 T A 1: 135,901,240 (GRCm39) I413F possibly damaging Het
Ighv1-52 G T 12: 115,109,406 (GRCm39) H17N probably benign Het
Kcnu1 T A 8: 26,424,516 (GRCm39) D270E possibly damaging Het
Kif16b A C 2: 142,690,259 (GRCm39) N274K probably damaging Het
Klk1b11 C T 7: 43,648,446 (GRCm39) T151I probably benign Het
Krtap13 A G 16: 88,548,458 (GRCm39) F10S probably damaging Het
Large1 A T 8: 73,585,969 (GRCm39) I379N probably damaging Het
Lhx8 T C 3: 154,017,332 (GRCm39) H301R probably damaging Het
Lrriq3 T C 3: 154,835,021 (GRCm39) V252A probably benign Het
Lysmd3 T A 13: 81,817,311 (GRCm39) I96N probably damaging Het
Mpeg1 C T 19: 12,438,793 (GRCm39) Q84* probably null Het
Myoz1 C T 14: 20,700,722 (GRCm39) G165D probably benign Het
Myt1 G A 2: 181,439,413 (GRCm39) V312I probably benign Het
Ndufb7 T C 8: 84,293,606 (GRCm39) probably benign Het
Numa1 C T 7: 101,626,644 (GRCm39) T10M probably damaging Het
Or10d1b T A 9: 39,613,366 (GRCm39) H233L probably benign Het
Or1e30 A C 11: 73,677,790 (GRCm39) I9L probably benign Het
Or2g7 A T 17: 38,378,157 (GRCm39) I32F probably damaging Het
Or4f14d A T 2: 111,960,903 (GRCm39) D84E probably damaging Het
Or4k39 T C 2: 111,239,585 (GRCm39) noncoding transcript Het
Osmr A T 15: 6,856,756 (GRCm39) S464T probably benign Het
Pak5 G A 2: 135,925,149 (GRCm39) H718Y probably damaging Het
Pan2 T A 10: 128,150,864 (GRCm39) probably null Het
Pik3r4 T C 9: 105,546,208 (GRCm39) S853P probably benign Het
Pnkp C T 7: 44,511,827 (GRCm39) S113L probably damaging Het
Polr3gl T A 3: 96,485,795 (GRCm39) probably benign Het
Psd2 G A 18: 36,112,863 (GRCm39) R186Q possibly damaging Het
Psd4 T C 2: 24,295,450 (GRCm39) V868A probably benign Het
Ralgapa2 G T 2: 146,254,004 (GRCm39) T852K probably benign Het
Rbm43 T C 2: 51,822,435 (GRCm39) probably benign Het
Rps6kl1 C A 12: 85,186,122 (GRCm39) G329C probably damaging Het
Scaf11 T C 15: 96,317,423 (GRCm39) T714A probably benign Het
Selenoo C A 15: 88,978,508 (GRCm39) N310K possibly damaging Het
Sepsecs T C 5: 52,818,003 (GRCm39) Q258R probably damaging Het
Sgcz T C 8: 37,993,420 (GRCm39) S226G probably benign Het
Slfn5 A G 11: 82,851,754 (GRCm39) K627E probably damaging Het
Sos1 A T 17: 80,715,677 (GRCm39) F1027I probably damaging Het
Ssh1 C G 5: 114,095,459 (GRCm39) V228L possibly damaging Het
Sugp1 C A 8: 70,501,317 (GRCm39) P65T probably benign Het
Tas2r106 T A 6: 131,655,779 (GRCm39) N24I probably damaging Het
Tex10 T C 4: 48,459,272 (GRCm39) E534G possibly damaging Het
Tmem182 C T 1: 40,894,061 (GRCm39) T192I possibly damaging Het
Traf7 T A 17: 24,737,718 (GRCm39) K51* probably null Het
Trap1 C A 16: 3,861,952 (GRCm39) R604L probably damaging Het
Trim6 T A 7: 103,877,447 (GRCm39) L179Q probably damaging Het
Ubfd1 T C 7: 121,670,973 (GRCm39) S264P probably damaging Het
Upk3bl T C 5: 136,093,045 (GRCm39) probably benign Het
Wdfy3 T A 5: 102,015,972 (GRCm39) Q2601L possibly damaging Het
Wdr89 A G 12: 75,679,412 (GRCm39) Y281H probably damaging Het
Zfp286 A T 11: 62,671,551 (GRCm39) M174K probably benign Het
Other mutations in Zmym1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01140:Zmym1 APN 4 126,943,435 (GRCm39) missense probably damaging 1.00
IGL02326:Zmym1 APN 4 126,941,553 (GRCm39) missense probably damaging 1.00
IGL02392:Zmym1 APN 4 126,942,256 (GRCm39) missense probably damaging 1.00
IGL02431:Zmym1 APN 4 126,941,557 (GRCm39) nonsense probably null
IGL02512:Zmym1 APN 4 126,942,465 (GRCm39) missense probably damaging 1.00
IGL03303:Zmym1 APN 4 126,942,927 (GRCm39) missense probably damaging 1.00
BB009:Zmym1 UTSW 4 126,944,578 (GRCm39) missense possibly damaging 0.77
BB019:Zmym1 UTSW 4 126,944,578 (GRCm39) missense possibly damaging 0.77
R0195:Zmym1 UTSW 4 126,941,704 (GRCm39) missense possibly damaging 0.85
R0266:Zmym1 UTSW 4 126,941,818 (GRCm39) missense possibly damaging 0.86
R0416:Zmym1 UTSW 4 126,952,613 (GRCm39) missense probably benign 0.00
R1374:Zmym1 UTSW 4 126,943,404 (GRCm39) missense probably damaging 1.00
R1480:Zmym1 UTSW 4 126,942,405 (GRCm39) missense probably damaging 0.99
R1704:Zmym1 UTSW 4 126,942,177 (GRCm39) missense probably damaging 1.00
R1806:Zmym1 UTSW 4 126,941,872 (GRCm39) missense probably damaging 1.00
R1815:Zmym1 UTSW 4 126,942,814 (GRCm39) missense possibly damaging 0.76
R2124:Zmym1 UTSW 4 126,943,363 (GRCm39) missense probably benign 0.05
R2169:Zmym1 UTSW 4 126,947,996 (GRCm39) splice site probably null
R4027:Zmym1 UTSW 4 126,943,672 (GRCm39) missense probably benign 0.08
R4410:Zmym1 UTSW 4 126,941,897 (GRCm39) nonsense probably null
R4572:Zmym1 UTSW 4 126,944,628 (GRCm39) missense probably benign 0.39
R4788:Zmym1 UTSW 4 126,948,090 (GRCm39) missense probably benign 0.10
R5130:Zmym1 UTSW 4 126,942,451 (GRCm39) missense probably damaging 1.00
R5615:Zmym1 UTSW 4 126,943,191 (GRCm39) missense probably damaging 1.00
R6190:Zmym1 UTSW 4 126,941,677 (GRCm39) missense probably damaging 0.99
R7426:Zmym1 UTSW 4 126,943,191 (GRCm39) missense possibly damaging 0.81
R7464:Zmym1 UTSW 4 126,952,728 (GRCm39) nonsense probably null
R7540:Zmym1 UTSW 4 126,942,550 (GRCm39) missense probably benign
R7779:Zmym1 UTSW 4 126,948,038 (GRCm39) missense probably benign
R7807:Zmym1 UTSW 4 126,941,667 (GRCm39) missense probably damaging 1.00
R7876:Zmym1 UTSW 4 126,941,496 (GRCm39) missense probably damaging 0.98
R7932:Zmym1 UTSW 4 126,944,578 (GRCm39) missense possibly damaging 0.77
R8183:Zmym1 UTSW 4 126,952,649 (GRCm39) missense probably benign 0.07
R8276:Zmym1 UTSW 4 126,948,051 (GRCm39) missense probably damaging 0.99
R8744:Zmym1 UTSW 4 126,945,165 (GRCm39) missense probably damaging 1.00
R8798:Zmym1 UTSW 4 126,943,664 (GRCm39) missense possibly damaging 0.90
R9199:Zmym1 UTSW 4 126,944,623 (GRCm39) missense possibly damaging 0.80
R9385:Zmym1 UTSW 4 126,952,683 (GRCm39) missense probably damaging 1.00
T0722:Zmym1 UTSW 4 126,943,466 (GRCm39) missense probably benign 0.05
T0722:Zmym1 UTSW 4 126,942,043 (GRCm39) missense probably benign 0.01
T0722:Zmym1 UTSW 4 126,941,740 (GRCm39) missense probably benign 0.00
T0975:Zmym1 UTSW 4 126,943,466 (GRCm39) missense probably benign 0.05
T0975:Zmym1 UTSW 4 126,942,043 (GRCm39) missense probably benign 0.01
T0975:Zmym1 UTSW 4 126,941,740 (GRCm39) missense probably benign 0.00
Predicted Primers PCR Primer
(F):5'- GGCATTACCTGAAGGAGACTCC -3'
(R):5'- CCCAGGATCGTATGGTAGATAC -3'

Sequencing Primer
(F):5'- CTCCATCACAGCACTGTTGTATGAAG -3'
(R):5'- TGCAAGGGCTCATGTCCAAG -3'
Posted On 2016-06-15