Incidental Mutation 'R0446:Krt20'
ID 39397
Institutional Source Beutler Lab
Gene Symbol Krt20
Ensembl Gene ENSMUSG00000035775
Gene Name keratin 20
Synonyms CK20, 9030623C06Rik, cytokeratin 20
MMRRC Submission 038647-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.063) question?
Stock # R0446 (G1)
Quality Score 225
Status Not validated
Chromosome 11
Chromosomal Location 99428403-99438150 bp(-) (GRCm38)
Type of Mutation nonsense
DNA Base Change (assembly) G to A at 99437776 bp (GRCm38)
Zygosity Heterozygous
Amino Acid Change Glutamine to Stop codon at position 108 (Q108*)
Ref Sequence ENSEMBL: ENSMUSP00000017743 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000017743]
AlphaFold Q9D312
Predicted Effect probably null
Transcript: ENSMUST00000017743
AA Change: Q108*
SMART Domains Protein: ENSMUSP00000017743
Gene: ENSMUSG00000035775
AA Change: Q108*

low complexity region 3 26 N/A INTRINSIC
Filament 76 387 7.19e-146 SMART
low complexity region 410 431 N/A INTRINSIC
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.5%
  • 10x: 96.9%
  • 20x: 94.6%
Validation Efficiency
MGI Phenotype FUNCTION: This gene encodes a member of the keratin protein family and is found within a cluster of cytokeratin genes on chromosome 11. Keratins are cytoskeletal proteins that are preferentially expressed in epithelial cells. The encoded protein may help maintain intermediate filament organization in intestinal epithelium. Phosphorylation of this protein may also influence mucin secretion in the small intestine. [provided by RefSeq, Dec 2015]
Allele List at MGI
Other mutations in this stock
Total: 63 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
1110051M20Rik G A 2: 91,304,764 (GRCm38) T20I possibly damaging Het
4930435E12Rik G A 16: 38,828,702 (GRCm38) T15I probably benign Het
4933434E20Rik A G 3: 90,064,459 (GRCm38) T42A probably benign Het
Actr3b T A 5: 25,831,732 (GRCm38) I181K probably damaging Het
Avl9 G T 6: 56,736,483 (GRCm38) R242L probably benign Het
B3galt4 T C 17: 33,951,018 (GRCm38) E82G probably benign Het
Bag1 G A 4: 40,936,609 (GRCm38) T349I probably benign Het
Brip1 A T 11: 86,157,601 (GRCm38) L305Q probably damaging Het
Cdipt A G 7: 126,978,264 (GRCm38) T61A probably damaging Het
Cmya5 T A 13: 93,093,656 (GRCm38) R1641S probably benign Het
Cog7 T C 7: 121,937,072 (GRCm38) D515G probably benign Het
Cpsf4 T A 5: 145,177,244 (GRCm38) L171Q probably damaging Het
Cuzd1 A T 7: 131,316,280 (GRCm38) probably null Het
Dapk1 T A 13: 60,725,287 (GRCm38) probably null Het
Diaph1 A G 18: 37,853,590 (GRCm38) V1114A possibly damaging Het
Emx2 A T 19: 59,463,916 (GRCm38) K211* probably null Het
Fam160b1 G A 19: 57,381,407 (GRCm38) D461N probably benign Het
Fam170a T A 18: 50,280,632 (GRCm38) C55S possibly damaging Het
Fbxw26 A G 9: 109,743,720 (GRCm38) S119P probably benign Het
Fryl G A 5: 73,097,417 (GRCm38) T894M possibly damaging Het
Gad1-ps C A 10: 99,445,521 (GRCm38) noncoding transcript Het
Gm14124 A G 2: 150,268,073 (GRCm38) T228A possibly damaging Het
Gss T C 2: 155,567,745 (GRCm38) E257G probably benign Het
Klhdc1 A C 12: 69,283,308 (GRCm38) S404R probably benign Het
Kmt2e T A 5: 23,497,534 (GRCm38) probably null Het
Lmnb1 T A 18: 56,743,259 (GRCm38) S480T probably benign Het
Lyst T A 13: 13,638,048 (GRCm38) M1015K probably benign Het
Mdm1 T G 10: 118,152,056 (GRCm38) S290A probably benign Het
Mkln1 T A 6: 31,449,504 (GRCm38) F238I probably damaging Het
Mrgprb3 A G 7: 48,643,236 (GRCm38) V189A probably benign Het
Myrf G C 19: 10,218,162 (GRCm38) T428S probably benign Het
Naip2 A C 13: 100,161,782 (GRCm38) I582S probably benign Het
Neurod6 C T 6: 55,679,629 (GRCm38) E8K probably benign Het
Nlrp12 T C 7: 3,234,029 (GRCm38) I747V probably benign Het
Notch4 C T 17: 34,565,363 (GRCm38) R43W possibly damaging Het
Obscn A T 11: 58,995,412 (GRCm38) probably benign Het
Olfr1153 T C 2: 87,896,855 (GRCm38) Y219H possibly damaging Het
Olfr1346 T C 7: 6,475,025 (GRCm38) V305A probably benign Het
Olfr480 A T 7: 108,066,725 (GRCm38) Y24* probably null Het
Olfr522 A T 7: 140,162,471 (GRCm38) S160T probably damaging Het
Olfr920 G T 9: 38,755,818 (GRCm38) L43F probably damaging Het
Olfr958 A T 9: 39,550,451 (GRCm38) I140N probably damaging Het
Orc5 C T 5: 22,546,457 (GRCm38) V85I probably benign Het
Pccb T C 9: 100,982,797 (GRCm38) D468G probably damaging Het
Pdzd2 A T 15: 12,375,024 (GRCm38) V1675E probably benign Het
Pkd1l3 C G 8: 109,623,649 (GRCm38) D375E possibly damaging Het
Pltp A T 2: 164,854,400 (GRCm38) N97K probably damaging Het
Polr1a T C 6: 71,950,664 (GRCm38) probably null Het
Prss42 G A 9: 110,799,273 (GRCm38) V162I possibly damaging Het
Rbfox2 A T 15: 77,099,255 (GRCm38) Y269N probably damaging Het
Rftn2 A T 1: 55,214,195 (GRCm38) I83K probably damaging Het
S1pr4 A T 10: 81,498,989 (GRCm38) I217N probably damaging Het
Slc23a2 T C 2: 132,078,433 (GRCm38) K184R probably benign Het
Slc6a19 T C 13: 73,691,695 (GRCm38) N156S probably benign Het
Svep1 C T 4: 58,088,280 (GRCm38) G1723D probably damaging Het
Tbc1d32 T A 10: 56,192,898 (GRCm38) H358L possibly damaging Het
Tigit G T 16: 43,662,271 (GRCm38) N33K probably damaging Het
Tmem25 T C 9: 44,796,581 (GRCm38) Y139C probably damaging Het
Trmt13 G A 3: 116,582,626 (GRCm38) T372M probably damaging Het
Ubr2 A T 17: 46,983,298 (GRCm38) M303K probably damaging Het
Usp34 A G 11: 23,467,207 (GRCm38) E2952G probably damaging Het
Zan T A 5: 137,391,658 (GRCm38) I4851F unknown Het
Zfand4 C T 6: 116,288,054 (GRCm38) T160I probably benign Het
Other mutations in Krt20
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01455:Krt20 APN 11 99,431,943 (GRCm38) missense probably benign 0.01
IGL01926:Krt20 APN 11 99,437,826 (GRCm38) missense probably damaging 1.00
IGL02105:Krt20 APN 11 99,438,001 (GRCm38) missense probably benign 0.01
IGL03225:Krt20 APN 11 99,431,930 (GRCm38) missense probably damaging 0.97
IGL03274:Krt20 APN 11 99,430,029 (GRCm38) splice site probably benign
IGL03331:Krt20 APN 11 99,435,430 (GRCm38) splice site probably null
R0091:Krt20 UTSW 11 99,437,814 (GRCm38) missense probably damaging 1.00
R3955:Krt20 UTSW 11 99,432,211 (GRCm38) nonsense probably null
R4805:Krt20 UTSW 11 99,428,985 (GRCm38) missense unknown
R5156:Krt20 UTSW 11 99,430,053 (GRCm38) missense possibly damaging 0.92
R5620:Krt20 UTSW 11 99,435,457 (GRCm38) missense probably damaging 1.00
R6716:Krt20 UTSW 11 99,431,928 (GRCm38) missense possibly damaging 0.77
R7006:Krt20 UTSW 11 99,437,761 (GRCm38) missense probably benign 0.34
R8041:Krt20 UTSW 11 99,437,837 (GRCm38) missense probably damaging 1.00
R8296:Krt20 UTSW 11 99,432,237 (GRCm38) missense probably damaging 1.00
R9189:Krt20 UTSW 11 99,432,261 (GRCm38) missense possibly damaging 0.78
Predicted Primers PCR Primer

Sequencing Primer
Posted On 2013-05-23