Incidental Mutation 'R5047:Cyp2d40'
ID394426
Institutional Source Beutler Lab
Gene Symbol Cyp2d40
Ensembl Gene ENSMUSG00000068083
Gene Namecytochrome P450, family 2, subfamily d, polypeptide 40
Synonyms
MMRRC Submission 042637-MU
Accession Numbers
Is this an essential gene? Probably non essential (E-score: 0.122) question?
Stock #R5047 (G1)
Quality Score225
Status Validated
Chromosome15
Chromosomal Location82759833-82764183 bp(-) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) C to T at 82760259 bp
ZygosityHeterozygous
Amino Acid Change Arginine to Histidine at position 255 (R255H)
Ref Sequence ENSEMBL: ENSMUSP00000060524 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000055721]
Predicted Effect unknown
Transcript: ENSMUST00000055721
AA Change: R255H
SMART Domains Protein: ENSMUSP00000060524
Gene: ENSMUSG00000068083
AA Change: R255H

DomainStartEndE-ValueType
transmembrane domain 4 26 N/A INTRINSIC
Pfam:p450 59 335 1.3e-94 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000230433
Meta Mutation Damage Score 0.0957 question?
Coding Region Coverage
  • 1x: 99.0%
  • 3x: 98.1%
  • 10x: 95.5%
  • 20x: 89.5%
Validation Efficiency 96% (49/51)
Allele List at MGI
Other mutations in this stock
Total: 42 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
3632451O06Rik G T 14: 49,770,438 A526D probably damaging Het
4930503E14Rik A T 14: 44,169,241 M117K possibly damaging Het
Adamts13 G A 2: 26,996,910 A1020T probably damaging Het
Atg3 C A 16: 45,178,232 D132E probably benign Het
Blzf1 A G 1: 164,306,468 M4T possibly damaging Het
Cdon G A 9: 35,478,639 R863Q probably damaging Het
Evi5 T C 5: 107,821,874 K57R probably damaging Het
Fam186b T C 15: 99,280,686 E253G probably damaging Het
Fcgr1 A T 3: 96,285,884 F266I probably benign Het
Fchsd1 C T 18: 37,959,873 probably benign Het
Gm10142 G T 10: 77,716,162 C119F probably damaging Het
Gpr63 A G 4: 25,008,202 S309G probably benign Het
Herc3 C T 6: 58,855,760 Q137* probably null Het
Jmy T A 13: 93,441,572 H696L possibly damaging Het
Kif13a T C 13: 46,788,085 H972R probably benign Het
Lama1 C T 17: 67,743,281 Q296* probably null Het
Lmf1 C T 17: 25,631,838 probably benign Het
Lpp T C 16: 24,971,846 C352R probably damaging Het
Ltbp1 T C 17: 75,292,886 probably benign Het
Maml3 G T 3: 51,690,841 D807E possibly damaging Het
Mdc1 T A 17: 35,847,844 V372D probably benign Het
Mst1 C A 9: 108,084,309 H579Q probably benign Het
Olfr1238 A G 2: 89,406,713 V122A probably damaging Het
Olfr26 G A 9: 38,855,289 V76I probably benign Het
Olfr398 T C 11: 73,984,378 T77A probably damaging Het
Olfr739 T C 14: 50,425,239 F240S probably damaging Het
Pcdhb22 G T 18: 37,519,126 G216C probably damaging Het
Phlpp2 A T 8: 109,913,619 H472L probably benign Het
Plscr3 A G 11: 69,850,091 probably null Het
Rab7 A T 6: 88,005,223 probably null Het
Rad50 A G 11: 53,674,696 probably null Het
Scgb1b20 A G 7: 33,373,312 probably null Het
Scn9a A C 2: 66,562,480 L256R probably damaging Het
Spag1 G T 15: 36,195,442 Q260H probably damaging Het
Tatdn3 T A 1: 191,046,278 I239F probably damaging Het
Tcof1 A G 18: 60,831,914 S578P possibly damaging Het
Top3b A G 16: 16,891,418 T657A probably benign Het
Tstd3 A G 4: 21,759,621 probably null Het
Ttc4 A T 4: 106,668,238 L233H probably damaging Het
Vmn2r-ps130 T A 17: 23,063,820 M158K probably benign Het
Yeats2 A T 16: 20,208,465 Q822L probably damaging Het
Zfp976 A T 7: 42,613,419 C331* probably null Het
Other mutations in Cyp2d40
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01134:Cyp2d40 APN 15 82760901 missense unknown
IGL01313:Cyp2d40 APN 15 82761277 missense unknown
IGL01714:Cyp2d40 APN 15 82761240 missense possibly damaging 0.55
IGL02324:Cyp2d40 APN 15 82760948 splice site probably benign
IGL02993:Cyp2d40 APN 15 82761521 missense probably benign 0.19
IGL03162:Cyp2d40 APN 15 82760042 missense unknown
R0070:Cyp2d40 UTSW 15 82760774 missense unknown
R0499:Cyp2d40 UTSW 15 82761217 missense probably benign 0.11
R0885:Cyp2d40 UTSW 15 82760915 missense unknown
R1587:Cyp2d40 UTSW 15 82761133 splice site probably null
R1613:Cyp2d40 UTSW 15 82761439 missense unknown
R4773:Cyp2d40 UTSW 15 82761562 missense possibly damaging 0.73
R5604:Cyp2d40 UTSW 15 82764055 missense probably damaging 0.99
R6087:Cyp2d40 UTSW 15 82764004 missense possibly damaging 0.73
R6334:Cyp2d40 UTSW 15 82761552 missense probably benign 0.03
R6841:Cyp2d40 UTSW 15 82761486 missense probably benign 0.03
R7017:Cyp2d40 UTSW 15 82760033 missense unknown
R7045:Cyp2d40 UTSW 15 82761562 missense probably benign 0.01
R7565:Cyp2d40 UTSW 15 82760774 missense unknown
R7934:Cyp2d40 UTSW 15 82764011 missense probably damaging 0.99
Predicted Primers PCR Primer
(F):5'- CCGGTACTGAGAAGCTAAAGC -3'
(R):5'- TATGACAGCATCCAGTGTGTG -3'

Sequencing Primer
(F):5'- GGCTCACCCAGACATGCTC -3'
(R):5'- ACAGCATCCAGTGTGTGTGGTAG -3'
Posted On2016-06-15