Incidental Mutation 'R5147:Vmn1r65'
ID 395153
Institutional Source Beutler Lab
Gene Symbol Vmn1r65
Ensembl Gene ENSMUSG00000066850
Gene Name vomeronasal 1 receptor 65
Synonyms V1rd6, V3R6
MMRRC Submission 042731-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.056) question?
Stock # R5147 (G1)
Quality Score 225
Status Not validated
Chromosome 7
Chromosomal Location 6010749-6014009 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to G at 6011818 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Isoleucine to Leucine at position 139 (I139L)
Ref Sequence ENSEMBL: ENSMUSP00000083520 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000086338]
AlphaFold Q9EPS7
Predicted Effect probably benign
Transcript: ENSMUST00000086338
AA Change: I139L

PolyPhen 2 Score 0.011 (Sensitivity: 0.96; Specificity: 0.78)
SMART Domains Protein: ENSMUSP00000083520
Gene: ENSMUSG00000066850
AA Change: I139L

DomainStartEndE-ValueType
Pfam:TAS2R 20 308 7.3e-14 PFAM
Pfam:7tm_1 42 301 1.6e-6 PFAM
Pfam:V1R 53 308 5.6e-15 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000227656
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.6%
  • 10x: 97.1%
  • 20x: 94.5%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 37 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abca7 T C 10: 79,851,149 (GRCm39) Y2121H probably benign Het
Adgrf2 A G 17: 43,021,574 (GRCm39) Y417H probably damaging Het
Ap5z1 A C 5: 142,452,265 (GRCm39) D66A probably benign Het
Cachd1 T A 4: 100,821,688 (GRCm39) Y422N probably damaging Het
Cfap54 C T 10: 92,773,700 (GRCm39) G114D probably benign Het
Cgref1 C T 5: 31,091,049 (GRCm39) G255E probably benign Het
Cyp2a22 A C 7: 26,635,750 (GRCm39) L271R probably damaging Het
Dcp2 G T 18: 44,550,662 (GRCm39) E379* probably null Het
Fhl3 T A 4: 124,601,724 (GRCm39) D277E probably benign Het
Gm19684 C T 17: 36,439,411 (GRCm39) V190M probably damaging Het
Hpse T C 5: 100,867,375 (GRCm39) D29G probably benign Het
Il31 T C 5: 123,620,121 (GRCm39) probably benign Het
Ilk T C 7: 105,391,774 (GRCm39) C422R possibly damaging Het
Itga1 T G 13: 115,121,678 (GRCm39) D777A possibly damaging Het
Kank3 A G 17: 34,041,176 (GRCm39) D556G probably damaging Het
Lrit3 A G 3: 129,597,574 (GRCm39) S36P possibly damaging Het
Magi1 C T 6: 93,724,248 (GRCm39) E256K probably damaging Het
Mroh9 C G 1: 162,888,329 (GRCm39) G249R probably damaging Het
Mymk C T 2: 26,952,299 (GRCm39) M148I probably benign Het
Nlrp12 T A 7: 3,290,003 (GRCm39) I170F possibly damaging Het
Odad3 T C 9: 21,906,158 (GRCm39) E260G probably benign Het
Or5al7 A T 2: 85,992,378 (GRCm39) I305K possibly damaging Het
Or5an11 T A 19: 12,246,268 (GRCm39) S225T probably damaging Het
Pkd1l1 G A 11: 8,799,003 (GRCm39) T1803I possibly damaging Het
Ppp2r2b C T 18: 42,778,942 (GRCm39) V398I probably benign Het
Ppp2r5e T A 12: 75,516,544 (GRCm39) R214S probably damaging Het
Prss16 T C 13: 22,190,264 (GRCm39) D298G possibly damaging Het
Qprt G A 7: 126,707,622 (GRCm39) R189W probably damaging Het
Rara C T 11: 98,841,550 (GRCm39) S36F probably benign Het
Rasal2 A G 1: 157,003,264 (GRCm39) V465A probably damaging Het
Slc22a1 C T 17: 12,869,838 (GRCm39) G508R probably damaging Het
Slco2a1 C A 9: 102,927,468 (GRCm39) F120L probably damaging Het
Tex15 T A 8: 34,062,340 (GRCm39) L864* probably null Het
Tssk4 A G 14: 55,888,430 (GRCm39) I100V possibly damaging Het
Vgll4 A G 6: 114,867,576 (GRCm39) probably null Het
Vps13b C T 15: 35,456,824 (GRCm39) P757S probably benign Het
Ythdc2 G A 18: 44,977,359 (GRCm39) G385E probably damaging Het
Other mutations in Vmn1r65
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01636:Vmn1r65 APN 7 6,011,720 (GRCm39) missense probably benign 0.12
IGL02821:Vmn1r65 APN 7 6,011,893 (GRCm39) missense possibly damaging 0.62
R0991:Vmn1r65 UTSW 7 6,012,076 (GRCm39) missense probably damaging 0.99
R1457:Vmn1r65 UTSW 7 6,012,156 (GRCm39) missense probably benign 0.10
R1507:Vmn1r65 UTSW 7 6,012,108 (GRCm39) missense probably benign 0.13
R1856:Vmn1r65 UTSW 7 6,011,265 (GRCm39) missense possibly damaging 0.93
R2914:Vmn1r65 UTSW 7 6,012,040 (GRCm39) missense possibly damaging 0.69
R5279:Vmn1r65 UTSW 7 6,011,754 (GRCm39) missense probably damaging 1.00
R5399:Vmn1r65 UTSW 7 6,011,809 (GRCm39) nonsense probably null
R5409:Vmn1r65 UTSW 7 6,012,012 (GRCm39) missense possibly damaging 0.77
R5646:Vmn1r65 UTSW 7 6,012,223 (GRCm39) missense probably benign 0.01
R5963:Vmn1r65 UTSW 7 6,011,608 (GRCm39) missense probably damaging 1.00
R6034:Vmn1r65 UTSW 7 6,011,868 (GRCm39) missense probably damaging 1.00
R6034:Vmn1r65 UTSW 7 6,011,868 (GRCm39) missense probably damaging 1.00
R6327:Vmn1r65 UTSW 7 6,011,651 (GRCm39) missense possibly damaging 0.48
R7958:Vmn1r65 UTSW 7 6,011,254 (GRCm39) missense probably benign 0.01
R8121:Vmn1r65 UTSW 7 6,011,464 (GRCm39) missense possibly damaging 0.87
R8345:Vmn1r65 UTSW 7 6,011,256 (GRCm39) missense probably benign
R8725:Vmn1r65 UTSW 7 6,011,503 (GRCm39) missense probably damaging 1.00
R8727:Vmn1r65 UTSW 7 6,011,503 (GRCm39) missense probably damaging 1.00
R9246:Vmn1r65 UTSW 7 6,011,769 (GRCm39) missense possibly damaging 0.95
R9279:Vmn1r65 UTSW 7 6,011,988 (GRCm39) missense probably benign 0.06
R9778:Vmn1r65 UTSW 7 6,011,387 (GRCm39) nonsense probably null
Predicted Primers PCR Primer
(F):5'- ACTGTAAGAAGCTCATGCCAAC -3'
(R):5'- AAACTTAGCTGTGGCCAATACC -3'

Sequencing Primer
(F):5'- TGCCAACATTGAAACCAGAAGTTG -3'
(R):5'- AGCTGTGGCCAATACCTTCATTC -3'
Posted On 2016-06-21