Mutagenetix > Incidental Mutation

Incidental Mutation 'R5076:Vmn1r184'

395768

Institutional Source

Beutler Lab

Gene Symbol

Vmn1r184

Ensembl Gene

ENSMUSG00000046130

Gene Name

vomeronasal 1 receptor, 184

Synonyms

MMRRC Submission

042665-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.063) question?

Stock #

R5076 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

26260334-26270619 bp(+) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 26266921 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Methionine to Leucine at position 31 (M31L)

Ref Sequence

ENSEMBL: ENSMUSP00000154576 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000057123] [ENSMUST00000227230] [ENSMUST00000227232] [ENSMUST00000227534] [ENSMUST00000227790] [ENSMUST00000228145] [ENSMUST00000228369]

AlphaFold

E9Q2N4

Predicted Effect

probably benign
Transcript: ENSMUST00000057123
AA Change: M31L

PolyPhen 2 Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)

SMART Domains

Protein: ENSMUSP00000061885
Gene: ENSMUSG00000046130
AA Change: M31L

Domain	Start	End	E-Value	Type
Pfam:TAS2R	8	308	1.7e-7	PFAM
Pfam:V1R	35	297	7.5e-31	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000227230
AA Change: M31L

PolyPhen 2 Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)

Predicted Effect

probably benign
Transcript: ENSMUST00000227232
AA Change: M31L

PolyPhen 2 Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)

Predicted Effect

probably benign
Transcript: ENSMUST00000227534
AA Change: M31L

PolyPhen 2 Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)

Predicted Effect

probably benign
Transcript: ENSMUST00000227790
AA Change: M31L

PolyPhen 2 Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)

Predicted Effect

probably benign
Transcript: ENSMUST00000228145
AA Change: M31L

PolyPhen 2 Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)

Predicted Effect

probably benign
Transcript: ENSMUST00000228369
AA Change: M31L

PolyPhen 2 Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)

Meta Mutation Damage Score

0.0898

Coding Region Coverage

1x: 99.1%
3x: 98.3%
10x: 96.3%
20x: 92.0%

Validation Efficiency

97% (66/68)

Allele List at MGI

Other mutations in this stock

Total: 58 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4933434E20Rik	A	G	3: 90,056,252	I72V	probably benign	Het
Aadacl3	G	A	4: 144,456,070	P276L	possibly damaging	Het
Acp6	T	A	3: 97,167,989	S180T	probably benign	Het
Adgrd1	A	T	5: 129,143,989	R449*	probably null	Het
Ak1	T	C	2: 32,633,448	V176A	probably damaging	Het
Capzb	A	T	4: 139,287,814	D226V	possibly damaging	Het
Cd34	A	T	1: 194,948,030		probably benign	Het
Cdh15	C	A	8: 122,864,348	D445E	possibly damaging	Het
Chil4	A	G	3: 106,202,597	F367L	probably damaging	Het
Clstn2	T	C	9: 97,483,079	Y458C	probably damaging	Het
Ctsw	T	C	19: 5,468,458	Y9C	probably benign	Het
Dhrs7	T	C	12: 72,659,481	D50G	probably benign	Het
Dnah14	A	G	1: 181,757,234	K3177E	probably benign	Het
Ehd1	T	C	19: 6,277,221	F83L	probably benign	Het
Eif5a2	G	A	3: 28,782,737	V59I	possibly damaging	Het
Emilin3	T	A	2: 160,909,318		probably null	Het
Entpd8	A	G	2: 25,085,054	S426G	possibly damaging	Het
Epb41l4b	C	T	4: 57,040,984	G493D	probably damaging	Het
Fam208b	C	T	13: 3,576,357	V1198I	probably benign	Het
Gm11596	C	T	11: 99,792,872	G141R	unknown	Het
Gm1840	T	G	8: 5,640,130		noncoding transcript	Het
H2-Q4	T	C	17: 35,380,441	Y167H	probably damaging	Het
Hjurp	GT	GTT	1: 88,266,524		probably null	Het
Itpr1	A	G	6: 108,405,529		probably null	Het
Kif2c	A	T	4: 117,174,869		probably benign	Het
Klrb1-ps1	C	T	6: 129,119,788		noncoding transcript	Het
Krtap9-5	A	T	11: 99,949,468	T332S	unknown	Het
Lrrc39	A	T	3: 116,579,540	E283V	probably benign	Het
Mdga1	A	G	17: 29,850,554	S447P	possibly damaging	Het
Mindy1	G	A	3: 95,295,399	V425M	probably benign	Het
Mllt6	G	A	11: 97,669,500	S210N	possibly damaging	Het
Mrps5	T	A	2: 127,600,852	Y280*	probably null	Het
Muc3a	T	A	5: 137,210,540	T159S	probably damaging	Het
Olfr1252	T	A	2: 89,721,401	T237S	probably damaging	Het
Olfr1310	A	T	2: 112,008,592	M198K	probably damaging	Het
Olfr286	T	A	15: 98,226,761	I295F	probably damaging	Het
Pcdhga4	G	A	18: 37,685,595	V66I	probably benign	Het
Pdhx	T	C	2: 103,041,077	T203A	probably damaging	Het
Pdss1	A	G	2: 22,899,917		probably null	Het
Pdxk	G	T	10: 78,450,307	Q103K	probably benign	Het
Peg3	A	G	7: 6,708,420	C1268R	probably damaging	Het
Pitpnc1	A	T	11: 107,296,267	S77T	probably damaging	Het
Pnisr	T	A	4: 21,874,990		probably benign	Het
Poc1b	C	T	10: 99,107,841	T22I	probably damaging	Het
Ppfia1	G	A	7: 144,506,264	R604W	probably damaging	Het
Ppp1r3a	A	G	6: 14,754,681	F189S	probably damaging	Het
Rbks	T	A	5: 31,650,451	Y99*	probably null	Het
Rsg1	A	G	4: 141,217,385	I82M	probably benign	Het
Sh3rf2	G	T	18: 42,053,924	C36F	probably damaging	Het
Spock3	T	A	8: 63,345,855	N303K	probably damaging	Het
Tcaf2	T	C	6: 42,629,467	T518A	probably benign	Het
Tmem163	A	T	1: 127,500,276	V191D	probably damaging	Het
Trappc6b	A	G	12: 59,050,308	V76A	probably damaging	Het
Ube2nl	A	G	7: 61,549,532		noncoding transcript	Het
Unc5d	C	T	8: 28,694,676	V599M	possibly damaging	Het
Vrtn	C	A	12: 84,649,474	Q333K	probably damaging	Het
Zfp788	T	A	7: 41,648,584	F163I	possibly damaging	Het
Zfyve1	C	T	12: 83,555,647	R458H	probably damaging	Het

Other mutations in Vmn1r184

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01396:Vmn1r184	APN	7	26267437	missense	probably damaging	1.00
IGL01411:Vmn1r184	APN	7	26266895	missense	probably benign	0.06
IGL02961:Vmn1r184	APN	7	26267650	missense	probably benign	0.27
IGL03271:Vmn1r184	APN	7	26267609	missense	probably benign
R0302:Vmn1r184	UTSW	7	26267543	missense	probably damaging	1.00
R0384:Vmn1r184	UTSW	7	26267651	missense	probably benign	0.41
R0591:Vmn1r184	UTSW	7	26267075	missense	probably damaging	0.98
R0620:Vmn1r184	UTSW	7	26267177	missense	possibly damaging	0.46
R1644:Vmn1r184	UTSW	7	26267245	missense	probably benign	0.00
R2304:Vmn1r184	UTSW	7	26267125	missense	probably damaging	1.00
R2329:Vmn1r184	UTSW	7	26266962	missense	probably damaging	1.00
R3522:Vmn1r184	UTSW	7	26267583	nonsense	probably null
R5020:Vmn1r184	UTSW	7	26267530	missense	possibly damaging	0.87
R5030:Vmn1r184	UTSW	7	26267456	missense	probably benign	0.25
R5049:Vmn1r184	UTSW	7	26267368	missense	possibly damaging	0.49
R5213:Vmn1r184	UTSW	7	26267711	missense	probably damaging	0.99
R5554:Vmn1r184	UTSW	7	26266988	missense	probably damaging	1.00
R6146:Vmn1r184	UTSW	7	26267392	missense	probably benign	0.08
R6868:Vmn1r184	UTSW	7	26267302	missense	probably benign	0.00
R6937:Vmn1r184	UTSW	7	26267325	missense	probably benign	0.08
R6943:Vmn1r184	UTSW	7	26267138	missense	possibly damaging	0.77
R7190:Vmn1r184	UTSW	7	26267680	missense	probably damaging	1.00
R7239:Vmn1r184	UTSW	7	26267177	missense	possibly damaging	0.79
R7472:Vmn1r184	UTSW	7	26267399	missense	possibly damaging	0.82
R8258:Vmn1r184	UTSW	7	26267261	missense	probably benign	0.44
R8259:Vmn1r184	UTSW	7	26267261	missense	probably benign	0.44
R8911:Vmn1r184	UTSW	7	26266885	missense	possibly damaging	0.89
R9008:Vmn1r184	UTSW	7	26267752	missense	probably benign
R9159:Vmn1r184	UTSW	7	26267120	missense	possibly damaging	0.65
R9216:Vmn1r184	UTSW	7	26267278	missense	probably benign	0.00
R9548:Vmn1r184	UTSW	7	26267309	missense	probably benign	0.29
R9588:Vmn1r184	UTSW	7	26266922	missense	probably null	0.78
Z1177:Vmn1r184	UTSW	7	26266990	missense	possibly damaging	0.95

Predicted Primers

PCR Primer
(F):5'- AGCATCTCTGAAGCTCCATGG -3'
(R):5'- ACTCAAGAGGCAAGTGGTCC -3'

Sequencing Primer
(F):5'- GCATCTCTGAAGCTCCATGGTTAATG -3'
(R):5'- TCCTTGAATATAGAATAGGAGCTCAC -3'

Posted On

2016-06-21