Mutagenetix > Incidental Mutation

Incidental Mutation 'R0453:Oprl1'

39746

Institutional Source

Beutler Lab

Gene Symbol

Oprl1

Ensembl Gene

ENSMUSG00000027584

Gene Name

opioid receptor-like 1

Synonyms

MOR-C, morc, nociceptin/ orphaninFQ receptor, NOP, LC132, N/OFQ receptor, ORL1, XOR1

MMRRC Submission

038653-MU

Accession Numbers

Essential gene?

Possibly non essential (E-score: 0.331) question?

Stock #

R0453 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

181356809-181362778 bp(+) (GRCm39)

Type of Mutation

critical splice donor site (2 bp from exon)

DNA Base Change (assembly)

T to C at 181360527 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000104399 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000071585] [ENSMUST00000108763] [ENSMUST00000108763] [ENSMUST00000108766] [ENSMUST00000108767] [ENSMUST00000108767] [ENSMUST00000108768] [ENSMUST00000108768] [ENSMUST00000148334] [ENSMUST00000183693] [ENSMUST00000184127] [ENSMUST00000184795]

AlphaFold

P35377

Predicted Effect

probably null
Transcript: ENSMUST00000071585

SMART Domains

Protein: ENSMUSP00000071513
Gene: ENSMUSG00000027584

Domain	Start	End	E-Value	Type
Pfam:7tm_4	54	334	5.8e-9	PFAM
Pfam:7TM_GPCR_Srx	56	264	1.4e-6	PFAM
Pfam:7TM_GPCR_Srsx	59	331	1.2e-14	PFAM
Pfam:7tm_1	65	316	1.4e-62	PFAM
Pfam:7TM_GPCR_Srv	112	332	7.8e-12	PFAM

Predicted Effect

probably null
Transcript: ENSMUST00000108763

SMART Domains

Protein: ENSMUSP00000104394
Gene: ENSMUSG00000027584

Domain	Start	End	E-Value	Type
Pfam:7TM_GPCR_Srsx	59	317	6.9e-11	PFAM
Pfam:7tm_1	60	302	1.6e-62	PFAM
Pfam:7TM_GPCR_Srv	91	318	4.3e-12	PFAM

Predicted Effect

probably null
Transcript: ENSMUST00000108763

SMART Domains

Protein: ENSMUSP00000104394
Gene: ENSMUSG00000027584

Domain	Start	End	E-Value	Type
Pfam:7TM_GPCR_Srsx	59	317	6.9e-11	PFAM
Pfam:7tm_1	60	302	1.6e-62	PFAM
Pfam:7TM_GPCR_Srv	91	318	4.3e-12	PFAM

Predicted Effect

silent
Transcript: ENSMUST00000108766

SMART Domains

Protein: ENSMUSP00000104397
Gene: ENSMUSG00000027584

Domain	Start	End	E-Value	Type
Pfam:7TM_GPCR_Srx	56	189	3.6e-8	PFAM
Pfam:7TM_GPCR_Srsx	59	201	1.8e-9	PFAM
Pfam:7tm_1	65	210	1.6e-41	PFAM

Predicted Effect

probably null
Transcript: ENSMUST00000108767

SMART Domains

Protein: ENSMUSP00000104398
Gene: ENSMUSG00000027584

Domain	Start	End	E-Value	Type
Pfam:7TM_GPCR_Srsx	59	331	1.2e-14	PFAM
Pfam:7tm_1	65	316	2.1e-66	PFAM
Pfam:7TM_GPCR_Srv	105	332	7.6e-12	PFAM

Predicted Effect

probably null
Transcript: ENSMUST00000108767

SMART Domains

Protein: ENSMUSP00000104398
Gene: ENSMUSG00000027584

Domain	Start	End	E-Value	Type
Pfam:7TM_GPCR_Srsx	59	331	1.2e-14	PFAM
Pfam:7tm_1	65	316	2.1e-66	PFAM
Pfam:7TM_GPCR_Srv	105	332	7.6e-12	PFAM

Predicted Effect

probably null
Transcript: ENSMUST00000108768

SMART Domains

Protein: ENSMUSP00000104399
Gene: ENSMUSG00000027584

Domain	Start	End	E-Value	Type
Pfam:7TM_GPCR_Srsx	59	331	1.2e-14	PFAM
Pfam:7tm_1	65	316	2.1e-66	PFAM
Pfam:7TM_GPCR_Srv	105	332	7.6e-12	PFAM

Predicted Effect

probably null
Transcript: ENSMUST00000108768

SMART Domains

Protein: ENSMUSP00000104399
Gene: ENSMUSG00000027584

Domain	Start	End	E-Value	Type
Pfam:7TM_GPCR_Srsx	59	331	1.2e-14	PFAM
Pfam:7tm_1	65	316	2.1e-66	PFAM
Pfam:7TM_GPCR_Srv	105	332	7.6e-12	PFAM

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000126835

Predicted Effect

probably benign
Transcript: ENSMUST00000148334

SMART Domains

Protein: ENSMUSP00000118664
Gene: ENSMUSG00000027584

Domain	Start	End	E-Value	Type
Pfam:7tm_1	65	140	5.9e-21	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000183693

SMART Domains

Protein: ENSMUSP00000138810
Gene: ENSMUSG00000027584

Domain	Start	End	E-Value	Type
SCOP:d1l9ha_	21	77	1e-3	SMART
PDB:4EA3\|B	41	76	9e-17	PDB

Predicted Effect

probably benign
Transcript: ENSMUST00000184127

SMART Domains

Protein: ENSMUSP00000139119
Gene: ENSMUSG00000027584

Domain	Start	End	E-Value	Type
SCOP:d1l9ha_	21	76	3e-4	SMART
PDB:4EA3\|B	41	76	1e-16	PDB

Predicted Effect

probably benign
Transcript: ENSMUST00000184795

SMART Domains

Protein: ENSMUSP00000138979
Gene: ENSMUSG00000027584

Domain	Start	End	E-Value	Type
SCOP:d1l9ha_	21	71	2e-3	SMART
PDB:4EA3\|B	41	71	5e-13	PDB

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000151241

Meta Mutation Damage Score

0.9491

Coding Region Coverage

1x: 99.1%
3x: 98.3%
10x: 96.4%
20x: 93.6%

Validation Efficiency

99% (97/98)

MGI Phenotype

FUNCTION: The protein encoded by this gene is a member of the 7 transmembrane-spanning G protein-coupled receptor family, and functions as a receptor for the endogenous, opioid-related neuropeptide, nociceptin/orphanin FQ. This receptor-ligand system modulates a variety of biological functions and neurobehavior, including stress responses and anxiety behavior, learning and memory, locomotor activity, and inflammatory and immune responses. Alternatively spliced transcript variants have been described for this gene. A recent study provided evidence for translational readthrough in this gene and expression of an additional C-terminally extended isoform via the use of an alternative in-frame translation termination codon. [provided by RefSeq, Jan 2016]
PHENOTYPE: Mice homozygous for a null allele exhibit altered touch/nociception, facilitation of long-term potentiation and memory, increased dopamine release upon administration of opioid peptide agonist, impaired behavioral response to morphine, and increased susceptibility to noise-induced hearing loss. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 97 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Acad10	T	A	5: 121,765,445 (GRCm39)	K843*	probably null	Het
Adam26b	T	C	8: 43,973,387 (GRCm39)	I538M	probably benign	Het
Adamtsl1	T	C	4: 86,150,852 (GRCm39)	Y337H	probably damaging	Het
Ak7	T	C	12: 105,682,307 (GRCm39)	M156T	probably damaging	Het
Aldh3a1	A	G	11: 61,106,338 (GRCm39)	M238V	probably benign	Het
Asic4	T	A	1: 75,450,155 (GRCm39)		probably benign	Het
AW551984	A	G	9: 39,511,937 (GRCm39)	S25P	probably damaging	Het
Bbs7	T	A	3: 36,661,818 (GRCm39)	Y127F	possibly damaging	Het
Bco1	G	A	8: 117,835,516 (GRCm39)	E156K	possibly damaging	Het
Becn1	T	C	11: 101,181,275 (GRCm39)	D342G	probably damaging	Het
Birc6	T	A	17: 74,956,749 (GRCm39)	I3575N	probably damaging	Het
Brd10	T	C	19: 29,731,068 (GRCm39)	Y715C	probably damaging	Het
Cc2d2a	A	T	5: 43,860,636 (GRCm39)	M522L	probably benign	Het
Cerkl	A	G	2: 79,172,795 (GRCm39)	F293L	probably benign	Het
Chil3	T	G	3: 106,056,221 (GRCm39)	N311T	probably benign	Het
Cpeb2	T	A	5: 43,443,056 (GRCm39)		probably benign	Het
Cpxm2	A	G	7: 131,730,134 (GRCm39)	S162P	probably damaging	Het
Cracr2b	A	C	7: 141,044,176 (GRCm39)	E136A	probably damaging	Het
Cyp2a4	T	A	7: 26,012,258 (GRCm39)	M347K	probably benign	Het
Dicer1	C	A	12: 104,668,889 (GRCm39)	R1264S	probably benign	Het
Dlgap1	T	A	17: 71,068,341 (GRCm39)	N609K	probably benign	Het
Dnhd1	A	G	7: 105,323,651 (GRCm39)	T641A	probably benign	Het
Egfl8	T	C	17: 34,833,856 (GRCm39)	Y74C	probably damaging	Het
Esyt1	A	G	10: 128,348,078 (GRCm39)	S901P	probably benign	Het
Fam83e	A	T	7: 45,373,372 (GRCm39)	D246V	probably damaging	Het
Galnt2	T	C	8: 125,065,323 (GRCm39)		probably benign	Het
Hdc	A	G	2: 126,436,871 (GRCm39)		probably benign	Het
Herc1	A	C	9: 66,307,054 (GRCm39)	Q958P	probably benign	Het
Iqcg	T	A	16: 32,870,213 (GRCm39)		probably benign	Het
Iqub	A	T	6: 24,450,829 (GRCm39)	F590Y	probably damaging	Het
Jak2	T	C	19: 29,289,238 (GRCm39)	I1130T	probably benign	Het
Kbtbd11	G	A	8: 15,077,499 (GRCm39)	A33T	probably benign	Het
Kcnip4	A	G	5: 48,667,054 (GRCm39)	L37P	probably damaging	Het
Klk6	A	G	7: 43,477,963 (GRCm39)	N112D	probably damaging	Het
Kmt2c	G	A	5: 25,559,745 (GRCm39)	T1011I	probably damaging	Het
Knl1	A	T	2: 118,898,869 (GRCm39)	K190M	probably damaging	Het
Lama3	T	A	18: 12,598,535 (GRCm39)	S981T	possibly damaging	Het
Lrrc18	T	C	14: 32,730,608 (GRCm39)	L49P	probably damaging	Het
Lrrc31	T	C	3: 30,741,674 (GRCm39)	E245G	probably damaging	Het
Lypd10	T	A	7: 24,413,712 (GRCm39)	S243T	probably benign	Het
Macf1	T	C	4: 123,338,737 (GRCm39)	I2456M	probably benign	Het
Mcm6	T	A	1: 128,261,292 (GRCm39)	T771S	probably benign	Het
Met	A	C	6: 17,534,197 (GRCm39)	Y680S	possibly damaging	Het
Mixl1	T	A	1: 180,524,211 (GRCm39)	T123S	probably damaging	Het
Myh8	A	T	11: 67,183,731 (GRCm39)	I787F	probably benign	Het
Myocd	A	G	11: 65,087,051 (GRCm39)	F292S	probably damaging	Het
Neb	T	C	2: 52,203,902 (GRCm39)		probably null	Het
Nfe2l1	A	G	11: 96,718,194 (GRCm39)	S114P	probably damaging	Het
Nrxn2	T	C	19: 6,541,551 (GRCm39)	S986P	probably damaging	Het
Or11h6	T	C	14: 50,880,461 (GRCm39)	V241A	possibly damaging	Het
Or4a73	A	T	2: 89,421,095 (GRCm39)	Y121*	probably null	Het
Or5b101	T	G	19: 13,005,295 (GRCm39)	T133P	probably damaging	Het
Or6c8	A	G	10: 128,915,640 (GRCm39)	F64S	probably damaging	Het
Or8b53	G	A	9: 38,667,425 (GRCm39)	G147D	probably damaging	Het
Or8c9	A	T	9: 38,241,467 (GRCm39)	T195S	probably benign	Het
Panx2	T	A	15: 88,952,610 (GRCm39)	I359N	probably damaging	Het
Pik3c2b	T	A	1: 133,005,134 (GRCm39)	V545E	probably damaging	Het
Piwil4	T	C	9: 14,638,748 (GRCm39)	N259S	probably benign	Het
Plcxd2	A	T	16: 45,800,919 (GRCm39)	F102I	probably damaging	Het
Pld5	A	T	1: 175,917,522 (GRCm39)	M75K	possibly damaging	Het
Pmp22	T	A	11: 63,041,929 (GRCm39)		probably benign	Het
Polr2a	A	G	11: 69,631,845 (GRCm39)	S1074P	possibly damaging	Het
Pop1	T	A	15: 34,526,352 (GRCm39)	V649E	possibly damaging	Het
Prc1	A	G	7: 79,962,850 (GRCm39)	N548S	probably damaging	Het
Prss51	T	C	14: 64,334,588 (GRCm39)	L202P	probably damaging	Het
Rhpn1	T	C	15: 75,585,428 (GRCm39)	S576P	possibly damaging	Het
Rictor	A	G	15: 6,738,123 (GRCm39)	D20G	probably benign	Het
Rpl13a-ps1	A	T	19: 50,018,645 (GRCm39)	L177*	probably null	Het
Rpl23a-ps1	T	G	1: 46,021,087 (GRCm39)		noncoding transcript	Het
Saa2	A	G	7: 46,402,902 (GRCm39)	D51G	probably damaging	Het
Sec31a	A	T	5: 100,551,977 (GRCm39)		probably benign	Het
Secisbp2	G	A	13: 51,837,361 (GRCm39)	E841K	possibly damaging	Het
Serinc1	A	G	10: 57,393,306 (GRCm39)	Y437H	probably damaging	Het
Slc39a12	A	T	2: 14,440,492 (GRCm39)	H481L	probably benign	Het
Suz12	T	A	11: 79,920,859 (GRCm39)	N586K	probably damaging	Het
Synm	T	C	7: 67,386,630 (GRCm39)	Y344C	possibly damaging	Het
Tas2r104	A	G	6: 131,662,304 (GRCm39)	V135A	probably benign	Het
Tdrd9	T	C	12: 112,034,673 (GRCm39)	S1371P	probably benign	Het
Tg	T	A	15: 66,700,382 (GRCm39)	D893E	probably benign	Het
Thoc5	C	A	11: 4,868,217 (GRCm39)	D423E	possibly damaging	Het
Trim11	G	A	11: 58,881,361 (GRCm39)	R418H	probably damaging	Het
Trim52	T	G	14: 106,344,399 (GRCm39)	V19G	probably damaging	Het
Tuba4a	C	A	1: 75,192,502 (GRCm39)	V371L	probably damaging	Het
Ugt8a	A	G	3: 125,708,606 (GRCm39)	V168A	probably benign	Het
Ulk1	C	T	5: 110,938,951 (GRCm39)	G496R	probably damaging	Het
Usp40	A	G	1: 87,874,320 (GRCm39)	*1236Q	probably null	Het
Vmn2r100	C	A	17: 19,742,382 (GRCm39)	P252Q	possibly damaging	Het
Vmn2r24	A	G	6: 123,757,350 (GRCm39)		probably null	Het
Vmn2r53	A	G	7: 12,316,338 (GRCm39)	Y494H	probably damaging	Het
Vmn2r65	T	A	7: 84,595,442 (GRCm39)	D414V	probably benign	Het
Wdr26	A	T	1: 181,010,444 (GRCm39)	L519*	probably null	Het
Wnk1	A	G	6: 119,940,112 (GRCm39)	V173A	probably damaging	Het
Zfp217	C	T	2: 169,957,382 (GRCm39)	A539T	probably benign	Het
Zfp318	T	C	17: 46,707,634 (GRCm39)	S231P	probably damaging	Het
Zfp398	T	C	6: 47,842,782 (GRCm39)	V146A	probably benign	Het
Zfp410	T	C	12: 84,378,486 (GRCm39)	M270T	probably damaging	Het
Zfp445	A	T	9: 122,682,578 (GRCm39)	H454Q	possibly damaging	Het

Other mutations in Oprl1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL02977:Oprl1	APN	2	181,360,304 (GRCm39)	missense	probably damaging	1.00
R0302:Oprl1	UTSW	2	181,361,021 (GRCm39)	missense	probably benign	0.01
R1564:Oprl1	UTSW	2	181,360,733 (GRCm39)	missense	possibly damaging	0.79
R1618:Oprl1	UTSW	2	181,360,646 (GRCm39)	missense	probably benign	0.22
R4801:Oprl1	UTSW	2	181,361,046 (GRCm39)	missense	probably benign
R4802:Oprl1	UTSW	2	181,361,046 (GRCm39)	missense	probably benign
R5032:Oprl1	UTSW	2	181,360,795 (GRCm39)	missense	probably damaging	1.00
R5133:Oprl1	UTSW	2	181,360,403 (GRCm39)	missense	probably damaging	0.99
R5134:Oprl1	UTSW	2	181,360,403 (GRCm39)	missense	probably damaging	0.99
R6284:Oprl1	UTSW	2	181,359,784 (GRCm39)	intron	probably benign
R6374:Oprl1	UTSW	2	181,357,721 (GRCm39)	missense	probably damaging	1.00
R6394:Oprl1	UTSW	2	181,360,795 (GRCm39)	missense	probably damaging	1.00
R6843:Oprl1	UTSW	2	181,357,547 (GRCm39)	missense	probably damaging	1.00
R7009:Oprl1	UTSW	2	181,360,174 (GRCm39)	missense	probably damaging	1.00
R8329:Oprl1	UTSW	2	181,360,717 (GRCm39)	missense	probably damaging	1.00
R9241:Oprl1	UTSW	2	181,360,405 (GRCm39)	missense	probably damaging	1.00
R9452:Oprl1	UTSW	2	181,360,454 (GRCm39)	missense	possibly damaging	0.89
R9712:Oprl1	UTSW	2	181,360,212 (GRCm39)	missense	probably damaging	1.00
X0022:Oprl1	UTSW	2	181,357,600 (GRCm39)	missense	probably benign	0.28
X0024:Oprl1	UTSW	2	181,360,341 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- ACTGTGCAAGACGGTCATTGCTATC -3'
(R):5'- ACCACGAAGTCGTCGAATCATGAG -3'

Sequencing Primer
(F):5'- AGACGGTCATTGCTATCGACTAC -3'
(R):5'- TGATCAGAACCGGGATGATG -3'

Posted On

2013-05-23