Incidental Mutation 'R5173:Mis18bp1'
ID 398931
Institutional Source Beutler Lab
Gene Symbol Mis18bp1
Ensembl Gene ENSMUSG00000047534
Gene Name MIS18 binding protein 1
Synonyms C79407
MMRRC Submission 042753-MU
Accession Numbers
Essential gene? Essential (E-score: 1.000) question?
Stock # R5173 (G1)
Quality Score 225
Status Validated
Chromosome 12
Chromosomal Location 65179508-65219363 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to C at 65196149 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Isoleucine to Methionine at position 538 (I538M)
Ref Sequence ENSEMBL: ENSMUSP00000052109 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000052201] [ENSMUST00000221296] [ENSMUST00000222244]
AlphaFold Q80WQ8
Predicted Effect possibly damaging
Transcript: ENSMUST00000052201
AA Change: I538M

PolyPhen 2 Score 0.956 (Sensitivity: 0.79; Specificity: 0.95)
SMART Domains Protein: ENSMUSP00000052109
Gene: ENSMUSG00000047534
AA Change: I538M

DomainStartEndE-ValueType
low complexity region 319 332 N/A INTRINSIC
Pfam:SANTA 336 425 1.4e-27 PFAM
coiled coil region 428 448 N/A INTRINSIC
coiled coil region 645 668 N/A INTRINSIC
SANT 742 794 9.48e-6 SMART
low complexity region 874 884 N/A INTRINSIC
Predicted Effect noncoding transcript
Transcript: ENSMUST00000140391
Predicted Effect noncoding transcript
Transcript: ENSMUST00000149986
Predicted Effect probably benign
Transcript: ENSMUST00000221296
Predicted Effect probably benign
Transcript: ENSMUST00000222244
Meta Mutation Damage Score 0.1795 question?
Coding Region Coverage
  • 1x: 99.3%
  • 3x: 98.7%
  • 10x: 97.3%
  • 20x: 95.5%
Validation Efficiency 100% (50/50)
Allele List at MGI
Other mutations in this stock
Total: 48 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abca13 AC A 11: 9,632,032 (GRCm39) probably null Het
Abca6 A T 11: 110,082,546 (GRCm39) F1142L probably benign Het
Ap1g1 T A 8: 110,577,764 (GRCm39) probably null Het
Apob T C 12: 8,058,238 (GRCm39) V2207A probably benign Het
Cenpp CAAACCTGAAAA CAAA 13: 49,618,258 (GRCm39) probably null Het
Chd3 A G 11: 69,260,069 (GRCm39) probably benign Het
Coch C A 12: 51,643,290 (GRCm39) Y103* probably null Het
Cul3 A T 1: 80,259,133 (GRCm39) D382E possibly damaging Het
Cul5 T C 9: 53,554,034 (GRCm39) T291A probably benign Het
Dab1 T C 4: 104,545,645 (GRCm39) probably null Het
Dmtf1 A G 5: 9,190,356 (GRCm39) probably benign Het
Dpp4 T C 2: 62,217,474 (GRCm39) Y41C probably damaging Het
Eif2ak4 A G 2: 118,238,841 (GRCm39) I45M probably damaging Het
Epn3 T C 11: 94,386,923 (GRCm39) K149R probably damaging Het
Flnc A G 6: 29,455,537 (GRCm39) E2029G probably damaging Het
Gm5799 A G 14: 43,782,116 (GRCm39) N96S probably damaging Het
Gprc5c G T 11: 114,755,093 (GRCm39) V257L possibly damaging Het
Grik5 T C 7: 24,762,319 (GRCm39) H224R possibly damaging Het
Lpar6 A T 14: 73,476,537 (GRCm39) E166V probably benign Het
Mical1 T C 10: 41,360,985 (GRCm39) L683P probably damaging Het
Mobp A G 9: 119,997,311 (GRCm39) R77G possibly damaging Het
Muc21 G T 17: 35,931,633 (GRCm39) probably benign Het
Mylk A G 16: 34,797,383 (GRCm39) H1614R probably benign Het
Or2y16 T C 11: 49,334,713 (GRCm39) F12L probably benign Het
Or4p18 G A 2: 88,233,266 (GRCm39) T4I probably benign Het
Or7c19 T C 8: 85,957,205 (GRCm39) L27P probably damaging Het
Osbpl1a C T 18: 12,895,697 (GRCm39) V390I probably benign Het
Pcdha7 C A 18: 37,107,705 (GRCm39) D243E probably benign Het
Pi4ka A T 16: 17,168,770 (GRCm39) N653K possibly damaging Het
Plin5 T G 17: 56,422,548 (GRCm39) probably null Het
Plod1 A G 4: 148,000,758 (GRCm39) probably benign Het
Psd3 T C 8: 68,149,641 (GRCm39) K372E probably damaging Het
Psmd11 C T 11: 80,351,566 (GRCm39) T263I probably benign Het
Ptprt A T 2: 161,769,676 (GRCm39) N396K probably benign Het
Rab39 T C 9: 53,597,800 (GRCm39) E155G probably damaging Het
Rimbp2 T C 5: 128,874,712 (GRCm39) D293G probably benign Het
Rnf220 T C 4: 117,146,471 (GRCm39) probably benign Het
Rnmt C T 18: 68,454,430 (GRCm39) probably benign Het
Slc10a1 T A 12: 81,002,802 (GRCm39) I279F probably damaging Het
Sp140l1 G A 1: 85,078,288 (GRCm39) R54* probably null Het
Taar6 A G 10: 23,861,250 (GRCm39) Y99H probably damaging Het
Tas2r144 T A 6: 42,193,048 (GRCm39) F263I probably benign Het
Tex15 T A 8: 34,061,768 (GRCm39) N399K possibly damaging Het
Tlr9 T A 9: 106,103,151 (GRCm39) V814D possibly damaging Het
Tmem53 T A 4: 117,122,908 (GRCm39) probably benign Het
Ubap2l T C 3: 89,928,337 (GRCm39) I511V possibly damaging Het
Vmn2r60 T C 7: 41,844,935 (GRCm39) M766T probably damaging Het
Zfp462 T C 4: 55,011,115 (GRCm39) V1027A probably damaging Het
Other mutations in Mis18bp1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01329:Mis18bp1 APN 12 65,205,215 (GRCm39) missense possibly damaging 0.68
IGL01383:Mis18bp1 APN 12 65,195,763 (GRCm39) missense probably benign 0.05
IGL01736:Mis18bp1 APN 12 65,185,452 (GRCm39) missense probably damaging 1.00
IGL02037:Mis18bp1 APN 12 65,183,522 (GRCm39) critical splice donor site probably null
IGL02210:Mis18bp1 APN 12 65,183,605 (GRCm39) nonsense probably null
IGL02318:Mis18bp1 APN 12 65,205,515 (GRCm39) missense probably benign 0.04
IGL02541:Mis18bp1 APN 12 65,208,234 (GRCm39) missense probably damaging 0.97
IGL02664:Mis18bp1 APN 12 65,200,654 (GRCm39) nonsense probably null
IGL02838:Mis18bp1 APN 12 65,183,600 (GRCm39) missense probably damaging 0.99
IGL03031:Mis18bp1 APN 12 65,208,704 (GRCm39) missense probably benign
PIT4453001:Mis18bp1 UTSW 12 65,205,447 (GRCm39) missense probably damaging 0.98
R0555:Mis18bp1 UTSW 12 65,208,227 (GRCm39) missense possibly damaging 0.94
R1169:Mis18bp1 UTSW 12 65,190,057 (GRCm39) nonsense probably null
R1517:Mis18bp1 UTSW 12 65,180,587 (GRCm39) missense probably benign 0.03
R1702:Mis18bp1 UTSW 12 65,208,518 (GRCm39) missense probably benign
R1705:Mis18bp1 UTSW 12 65,196,113 (GRCm39) missense probably benign 0.19
R1888:Mis18bp1 UTSW 12 65,196,102 (GRCm39) missense probably benign 0.01
R1888:Mis18bp1 UTSW 12 65,196,102 (GRCm39) missense probably benign 0.01
R1973:Mis18bp1 UTSW 12 65,195,850 (GRCm39) nonsense probably null
R1990:Mis18bp1 UTSW 12 65,205,468 (GRCm39) missense probably benign 0.03
R2023:Mis18bp1 UTSW 12 65,195,883 (GRCm39) missense probably damaging 0.97
R2043:Mis18bp1 UTSW 12 65,196,192 (GRCm39) missense probably damaging 1.00
R2318:Mis18bp1 UTSW 12 65,187,617 (GRCm39) missense possibly damaging 0.92
R2897:Mis18bp1 UTSW 12 65,180,360 (GRCm39) missense probably benign 0.09
R3120:Mis18bp1 UTSW 12 65,203,762 (GRCm39) splice site probably null
R3845:Mis18bp1 UTSW 12 65,195,916 (GRCm39) missense possibly damaging 0.61
R4578:Mis18bp1 UTSW 12 65,200,655 (GRCm39) missense probably damaging 1.00
R4590:Mis18bp1 UTSW 12 65,205,280 (GRCm39) missense possibly damaging 0.50
R4614:Mis18bp1 UTSW 12 65,200,303 (GRCm39) intron probably benign
R4626:Mis18bp1 UTSW 12 65,187,540 (GRCm39) missense probably damaging 1.00
R4724:Mis18bp1 UTSW 12 65,205,513 (GRCm39) missense probably benign 0.18
R4873:Mis18bp1 UTSW 12 65,208,209 (GRCm39) missense probably benign 0.23
R4875:Mis18bp1 UTSW 12 65,208,209 (GRCm39) missense probably benign 0.23
R5294:Mis18bp1 UTSW 12 65,203,817 (GRCm39) missense probably damaging 1.00
R5540:Mis18bp1 UTSW 12 65,195,520 (GRCm39) missense possibly damaging 0.83
R5560:Mis18bp1 UTSW 12 65,199,590 (GRCm39) missense possibly damaging 0.83
R5584:Mis18bp1 UTSW 12 65,201,550 (GRCm39) missense probably damaging 0.98
R5661:Mis18bp1 UTSW 12 65,195,626 (GRCm39) missense probably benign 0.41
R6235:Mis18bp1 UTSW 12 65,205,182 (GRCm39) missense probably damaging 0.99
R6282:Mis18bp1 UTSW 12 65,195,937 (GRCm39) missense probably benign 0.01
R6284:Mis18bp1 UTSW 12 65,185,561 (GRCm39) missense probably benign 0.32
R6378:Mis18bp1 UTSW 12 65,196,021 (GRCm39) missense probably benign 0.11
R6418:Mis18bp1 UTSW 12 65,205,317 (GRCm39) missense possibly damaging 0.64
R7103:Mis18bp1 UTSW 12 65,196,057 (GRCm39) missense possibly damaging 0.61
R7244:Mis18bp1 UTSW 12 65,208,404 (GRCm39) missense probably damaging 0.96
R7371:Mis18bp1 UTSW 12 65,205,368 (GRCm39) missense probably benign 0.18
R7623:Mis18bp1 UTSW 12 65,195,626 (GRCm39) missense probably benign 0.05
R7845:Mis18bp1 UTSW 12 65,196,102 (GRCm39) missense probably benign 0.01
R7898:Mis18bp1 UTSW 12 65,196,246 (GRCm39) missense probably benign 0.41
R7912:Mis18bp1 UTSW 12 65,199,532 (GRCm39) missense possibly damaging 0.92
R8057:Mis18bp1 UTSW 12 65,195,673 (GRCm39) missense possibly damaging 0.56
R8403:Mis18bp1 UTSW 12 65,201,585 (GRCm39) missense possibly damaging 0.87
R8834:Mis18bp1 UTSW 12 65,208,419 (GRCm39) missense probably benign 0.00
R8905:Mis18bp1 UTSW 12 65,180,401 (GRCm39) critical splice acceptor site probably null
R8996:Mis18bp1 UTSW 12 65,180,632 (GRCm39) missense probably benign 0.24
R9007:Mis18bp1 UTSW 12 65,180,616 (GRCm39) missense probably benign 0.28
R9257:Mis18bp1 UTSW 12 65,180,631 (GRCm39) missense probably benign 0.14
R9299:Mis18bp1 UTSW 12 65,185,538 (GRCm39) missense possibly damaging 0.94
R9534:Mis18bp1 UTSW 12 65,205,234 (GRCm39) missense possibly damaging 0.68
R9593:Mis18bp1 UTSW 12 65,187,628 (GRCm39) missense probably damaging 1.00
R9716:Mis18bp1 UTSW 12 65,205,337 (GRCm39) start gained probably benign
X0058:Mis18bp1 UTSW 12 65,196,000 (GRCm39) missense probably damaging 0.99
Predicted Primers PCR Primer
(F):5'- GCAGTTTTGAGGGCAACTTG -3'
(R):5'- CTGAAGTACCCACTGATCCC -3'

Sequencing Primer
(F):5'- TCGGGCAAGGTATCTGAATATGTC -3'
(R):5'- TGATCCCTTGAACTCACTGGAAC -3'
Posted On 2016-07-06