Mutagenetix > Incidental Mutation

Incidental Mutation 'R5255:Vmn1r218'

399515

Institutional Source

Beutler Lab

Gene Symbol

Vmn1r218

Ensembl Gene

ENSMUSG00000115020

Gene Name

vomeronasal 1 receptor 218

Synonyms

V1ri5

MMRRC Submission

042826-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.140) question?

Stock #

R5255 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

23320655-23321551 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 23320881 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Aspartic acid to Valine at position 76 (D76V)

Ref Sequence

ENSEMBL: ENSMUSP00000154543 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000074992] [ENSMUST00000226692] [ENSMUST00000227050] [ENSMUST00000227160] [ENSMUST00000227741]

AlphaFold

Q8R261

Predicted Effect

possibly damaging
Transcript: ENSMUST00000074992
AA Change: D76V

PolyPhen 2 Score 0.923 (Sensitivity: 0.81; Specificity: 0.94)

SMART Domains

Protein: ENSMUSP00000074519
Gene: ENSMUSG00000115020
AA Change: D76V

Domain	Start	End	E-Value	Type
Pfam:TAS2R	1	288	2e-7	PFAM
Pfam:V1R	33	297	5.4e-41	PFAM

Predicted Effect

possibly damaging
Transcript: ENSMUST00000226692
AA Change: D76V

PolyPhen 2 Score 0.923 (Sensitivity: 0.81; Specificity: 0.94)

Predicted Effect

possibly damaging
Transcript: ENSMUST00000227050
AA Change: D76V

PolyPhen 2 Score 0.923 (Sensitivity: 0.81; Specificity: 0.94)

Predicted Effect

probably benign
Transcript: ENSMUST00000227160

Predicted Effect

probably benign
Transcript: ENSMUST00000227741

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000228348

Coding Region Coverage

1x: 99.3%
3x: 98.6%
10x: 97.2%
20x: 95.3%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 46 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abcf1	A	T	17: 36,270,629 (GRCm39)		probably null	Het
Abr	T	A	11: 76,346,509 (GRCm39)	E434V	probably damaging	Het
Acaca	T	A	11: 84,202,133 (GRCm39)	L197Q	probably damaging	Het
Acot10	A	G	15: 20,666,018 (GRCm39)	I241T	probably benign	Het
Acp6	T	C	3: 97,075,312 (GRCm39)	V182A	probably benign	Het
Ahnak2	G	A	12: 112,739,812 (GRCm39)	T1420I	possibly damaging	Het
Akr1c6	A	T	13: 4,497,018 (GRCm39)	K153N	probably benign	Het
Ank3	T	C	10: 69,721,030 (GRCm39)	L600P	probably damaging	Het
Arhgef1	G	A	7: 24,624,447 (GRCm39)	A824T	probably damaging	Het
B230307C23Rik	T	A	16: 97,809,891 (GRCm39)	N22K	possibly damaging	Het
Btn1a1	A	G	13: 23,648,324 (GRCm39)		probably benign	Het
Cenpf	G	A	1: 189,404,824 (GRCm39)	T352I	possibly damaging	Het
Ces4a	C	A	8: 105,869,121 (GRCm39)	F185L	probably benign	Het
Clybl	A	C	14: 122,621,691 (GRCm39)	E293A	probably benign	Het
Cobl	A	G	11: 12,325,825 (GRCm39)	W217R	probably damaging	Het
D430041D05Rik	T	C	2: 104,086,945 (GRCm39)	N677S	probably benign	Het
Ddx51	C	A	5: 110,803,908 (GRCm39)	T390N	possibly damaging	Het
Drd5	T	G	5: 38,477,310 (GRCm39)	V101G	probably damaging	Het
Elmo3	C	T	8: 106,033,985 (GRCm39)	P244L	probably benign	Het
Esrrg	G	A	1: 187,878,555 (GRCm39)	R189H	probably damaging	Het
Fxr2	A	G	11: 69,534,667 (GRCm39)	T183A	probably benign	Het
Gjd4	T	C	18: 9,280,613 (GRCm39)	H155R	probably benign	Het
Hivep2	T	A	10: 14,007,011 (GRCm39)		probably null	Het
Ints10	T	C	8: 69,246,624 (GRCm39)		probably benign	Het
Kank4	T	C	4: 98,667,209 (GRCm39)	T413A	probably benign	Het
Mapkbp1	T	C	2: 119,847,735 (GRCm39)	V568A	probably damaging	Het
Mobp	A	G	9: 119,997,419 (GRCm39)		probably benign	Het
Mpst	A	G	15: 78,294,708 (GRCm39)	S147G	probably benign	Het
Myo5b	A	T	18: 74,795,741 (GRCm39)	Y559F	possibly damaging	Het
Nceh1	T	C	3: 27,237,288 (GRCm39)	I21T	probably damaging	Het
Or4f7	T	C	2: 111,644,523 (GRCm39)	K183E	probably benign	Het
Phf8-ps	A	T	17: 33,285,739 (GRCm39)	C354*	probably null	Het
Ralgps1	A	T	2: 33,166,171 (GRCm39)	V126E	probably damaging	Het
Rnls	A	G	19: 33,359,823 (GRCm39)	V115A	probably damaging	Het
Scn1a	A	T	2: 66,108,013 (GRCm39)	V1554D	probably damaging	Het
Slc16a11	T	A	11: 70,106,258 (GRCm39)	D165E	probably damaging	Het
Slc16a5	A	G	11: 115,353,501 (GRCm39)	T23A	probably benign	Het
Slc22a30	G	A	19: 8,321,757 (GRCm39)	Q436*	probably null	Het
Slc3a1	A	T	17: 85,335,881 (GRCm39)		probably null	Het
Slitrk6	A	T	14: 110,987,185 (GRCm39)	*841K	probably null	Het
Syngr1	A	G	15: 79,975,647 (GRCm39)	Y18C	possibly damaging	Het
Tarbp1	T	G	8: 127,155,709 (GRCm39)	D1343A	probably benign	Het
Vac14	T	A	8: 111,360,961 (GRCm39)	I177N	probably damaging	Het
Wdr75	T	A	1: 45,838,277 (GRCm39)	I62N	probably damaging	Het
Zfp12	A	T	5: 143,226,134 (GRCm39)	I68L	probably null	Het
Zswim8	T	A	14: 20,771,719 (GRCm39)	Y1551N	probably damaging	Het

Other mutations in Vmn1r218

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL02014:Vmn1r218	APN	13	23,321,001 (GRCm39)	missense	probably damaging	0.97
IGL02670:Vmn1r218	APN	13	23,321,174 (GRCm39)	missense	probably benign	0.01
IGL03085:Vmn1r218	APN	13	23,321,481 (GRCm39)	missense	possibly damaging	0.76
IGL03334:Vmn1r218	APN	13	23,320,788 (GRCm39)	missense	probably damaging	1.00
R0049:Vmn1r218	UTSW	13	23,321,225 (GRCm39)	nonsense	probably null
R0049:Vmn1r218	UTSW	13	23,321,225 (GRCm39)	nonsense	probably null
R1387:Vmn1r218	UTSW	13	23,321,478 (GRCm39)	missense	probably damaging	1.00
R1959:Vmn1r218	UTSW	13	23,320,683 (GRCm39)	missense	probably damaging	0.96
R3713:Vmn1r218	UTSW	13	23,321,081 (GRCm39)	missense	probably damaging	1.00
R3714:Vmn1r218	UTSW	13	23,321,081 (GRCm39)	missense	probably damaging	1.00
R4037:Vmn1r218	UTSW	13	23,320,971 (GRCm39)	missense	possibly damaging	0.91
R4038:Vmn1r218	UTSW	13	23,320,971 (GRCm39)	missense	possibly damaging	0.91
R4039:Vmn1r218	UTSW	13	23,320,971 (GRCm39)	missense	possibly damaging	0.91
R4432:Vmn1r218	UTSW	13	23,321,412 (GRCm39)	missense	possibly damaging	0.87
R5521:Vmn1r218	UTSW	13	23,320,743 (GRCm39)	missense	probably benign	0.01
R7384:Vmn1r218	UTSW	13	23,320,895 (GRCm39)	missense	probably benign	0.00
R7565:Vmn1r218	UTSW	13	23,320,830 (GRCm39)	missense	probably benign	0.05
R8178:Vmn1r218	UTSW	13	23,321,472 (GRCm39)	missense	probably benign	0.08
R8536:Vmn1r218	UTSW	13	23,321,535 (GRCm39)	missense	probably benign	0.00
R9225:Vmn1r218	UTSW	13	23,320,824 (GRCm39)	missense	probably benign	0.04
R9609:Vmn1r218	UTSW	13	23,320,839 (GRCm39)	missense	probably benign	0.01
R9734:Vmn1r218	UTSW	13	23,321,034 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- TTCTCTAGCTGGACCTGGAG -3'
(R):5'- GCAAGTTGGAGCTTATGAGAAC -3'

Sequencing Primer
(F):5'- CTGGACCTGGAGTTGTAGGAAATATC -3'
(R):5'- GGAGCTTATGAGAACATTAACAATCC -3'

Posted On

2016-07-06