Incidental Mutation 'R5220:Or13c7'
| ID |
402258 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Or13c7
|
| Ensembl Gene |
ENSMUSG00000071000 |
| Gene Name |
olfactory receptor family 13 subfamily C member 7 |
| Synonyms |
MOR262-14, mOR37a, OR37A, GA_x6K02T2N78B-16092200-16091241, Olfr37a, Olfr155 |
| MMRRC Submission |
042793-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.059)
|
| Stock # |
R5220 (G1)
|
| Quality Score |
225 |
|
Status
|
Not validated
|
| Chromosome |
4 |
| Chromosomal Location |
43854292-43855463 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
C to A
at 43854624 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Serine to Tyrosine
at position 105
(S105Y)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000103492
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000095108]
[ENSMUST00000107860]
|
| AlphaFold |
Q9QZ22 |
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000095108
AA Change: S105Y
PolyPhen 2
Score 0.895 (Sensitivity: 0.82; Specificity: 0.94)
|
| SMART Domains |
Protein: ENSMUSP00000092726
Gene: ENSMUSG00000071000
AA Change: S105Y
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_1
|
42 |
297 |
2.8e-35 |
PFAM |
|
Pfam:7tm_4
|
140 |
290 |
1.4e-45 |
PFAM |
|
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000107860
AA Change: S105Y
PolyPhen 2
Score 0.895 (Sensitivity: 0.82; Specificity: 0.94)
|
| SMART Domains |
Protein: ENSMUSP00000103492
Gene: ENSMUSG00000071000
AA Change: S105Y
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
32 |
315 |
9.7e-59 |
PFAM |
|
Pfam:7tm_1
|
42 |
297 |
3.5e-25 |
PFAM |
|
| Coding Region Coverage |
- 1x: 99.3%
- 3x: 98.8%
- 10x: 97.5%
- 20x: 95.9%
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 42 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Acan |
A |
G |
7: 78,738,045 (GRCm39) |
E250G |
probably damaging |
Het |
| Adgra1 |
A |
G |
7: 139,455,512 (GRCm39) |
N380S |
probably benign |
Het |
| Ap3d1 |
G |
A |
10: 80,563,001 (GRCm39) |
P160L |
probably damaging |
Het |
| Atg9a |
C |
T |
1: 75,162,372 (GRCm39) |
V505M |
probably damaging |
Het |
| Chsy3 |
A |
T |
18: 59,543,102 (GRCm39) |
I747F |
probably damaging |
Het |
| Clec2g |
A |
G |
6: 128,958,269 (GRCm39) |
S100G |
probably benign |
Het |
| Cmya5 |
G |
T |
13: 93,228,804 (GRCm39) |
P2095T |
probably damaging |
Het |
| Dcaf10 |
T |
C |
4: 45,373,909 (GRCm39) |
W445R |
possibly damaging |
Het |
| Espl1 |
T |
A |
15: 102,207,012 (GRCm39) |
L159M |
probably benign |
Het |
| Fbxw8 |
T |
C |
5: 118,233,776 (GRCm39) |
D285G |
possibly damaging |
Het |
| Fras1 |
C |
T |
5: 96,916,222 (GRCm39) |
R3419W |
probably damaging |
Het |
| Galc |
T |
A |
12: 98,197,672 (GRCm39) |
|
probably null |
Het |
| Ghdc |
T |
C |
11: 100,660,543 (GRCm39) |
E110G |
probably damaging |
Het |
| Gm4787 |
G |
C |
12: 81,424,604 (GRCm39) |
T518S |
probably benign |
Het |
| H2-T24 |
T |
C |
17: 36,325,562 (GRCm39) |
T309A |
probably benign |
Het |
| Helb |
A |
C |
10: 119,937,391 (GRCm39) |
F618V |
probably damaging |
Het |
| Hycc1 |
A |
C |
5: 24,170,220 (GRCm39) |
S376R |
possibly damaging |
Het |
| Ifi211 |
A |
G |
1: 173,735,262 (GRCm39) |
F56L |
probably damaging |
Het |
| Kntc1 |
T |
C |
5: 123,950,160 (GRCm39) |
F1988L |
probably damaging |
Het |
| Mapk13 |
G |
A |
17: 28,997,465 (GRCm39) |
S361N |
probably benign |
Het |
| Mapk3 |
A |
G |
7: 126,363,408 (GRCm39) |
I146V |
probably benign |
Het |
| Megf6 |
G |
A |
4: 154,338,295 (GRCm39) |
|
probably null |
Het |
| Mug1 |
G |
T |
6: 121,838,092 (GRCm39) |
V441F |
probably benign |
Het |
| Mymk |
A |
G |
2: 26,952,226 (GRCm39) |
S173P |
probably benign |
Het |
| Nox4 |
A |
G |
7: 87,023,616 (GRCm39) |
T501A |
possibly damaging |
Het |
| Or1e16 |
AGCGGTCGTAGGC |
AGC |
11: 73,286,480 (GRCm39) |
|
probably null |
Het |
| Or52n2 |
T |
C |
7: 104,542,104 (GRCm39) |
T244A |
possibly damaging |
Het |
| Prkcb |
C |
A |
7: 121,888,678 (GRCm39) |
H37Q |
probably damaging |
Het |
| Rabggtb |
A |
G |
3: 153,615,024 (GRCm39) |
F189L |
probably damaging |
Het |
| Setd1b |
T |
C |
5: 123,281,471 (GRCm39) |
I75T |
unknown |
Het |
| Slc10a5 |
T |
A |
3: 10,400,148 (GRCm39) |
R171* |
probably null |
Het |
| Slc12a4 |
A |
G |
8: 106,680,484 (GRCm39) |
F211L |
probably damaging |
Het |
| Slc1a5 |
T |
A |
7: 16,527,759 (GRCm39) |
W352R |
probably damaging |
Het |
| Slc22a27 |
C |
G |
19: 7,843,303 (GRCm39) |
A359P |
probably damaging |
Het |
| St8sia4 |
A |
G |
1: 95,555,460 (GRCm39) |
M190T |
probably damaging |
Het |
| Tmeff2 |
A |
G |
1: 51,018,476 (GRCm39) |
M153V |
probably benign |
Het |
| Trappc12 |
T |
C |
12: 28,796,696 (GRCm39) |
T279A |
probably damaging |
Het |
| Ubn1 |
G |
T |
16: 4,895,818 (GRCm39) |
A955S |
probably benign |
Het |
| Usp24 |
T |
A |
4: 106,239,500 (GRCm39) |
H1147Q |
possibly damaging |
Het |
| Vrk1 |
T |
A |
12: 106,039,865 (GRCm39) |
|
probably null |
Het |
| Zdhhc25 |
T |
A |
15: 88,485,365 (GRCm39) |
Y233* |
probably null |
Het |
| Zfp109 |
A |
G |
7: 23,928,179 (GRCm39) |
V418A |
probably benign |
Het |
|
| Other mutations in Or13c7 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL02729:Or13c7
|
APN |
4 |
43,854,439 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0240:Or13c7
|
UTSW |
4 |
43,854,512 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0240:Or13c7
|
UTSW |
4 |
43,854,512 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0285:Or13c7
|
UTSW |
4 |
43,854,398 (GRCm39) |
missense |
possibly damaging |
0.46 |
|
R0427:Or13c7
|
UTSW |
4 |
43,854,417 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4468:Or13c7
|
UTSW |
4 |
43,854,737 (GRCm39) |
missense |
probably benign |
0.08 |
|
R4548:Or13c7
|
UTSW |
4 |
43,854,834 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4583:Or13c7
|
UTSW |
4 |
43,855,262 (GRCm39) |
missense |
probably benign |
|
|
R4793:Or13c7
|
UTSW |
4 |
43,854,323 (GRCm39) |
missense |
probably benign |
0.37 |
|
R4884:Or13c7
|
UTSW |
4 |
43,854,890 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5016:Or13c7
|
UTSW |
4 |
43,854,596 (GRCm39) |
missense |
probably benign |
0.02 |
|
R5613:Or13c7
|
UTSW |
4 |
43,854,528 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R5805:Or13c7
|
UTSW |
4 |
43,855,152 (GRCm39) |
missense |
probably benign |
0.15 |
|
R5955:Or13c7
|
UTSW |
4 |
43,854,898 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6250:Or13c7
|
UTSW |
4 |
43,854,363 (GRCm39) |
missense |
possibly damaging |
0.58 |
|
R6768:Or13c7
|
UTSW |
4 |
43,854,351 (GRCm39) |
missense |
probably benign |
0.01 |
|
R6801:Or13c7
|
UTSW |
4 |
43,855,206 (GRCm39) |
nonsense |
probably null |
|
|
R6835:Or13c7
|
UTSW |
4 |
43,854,912 (GRCm39) |
missense |
probably benign |
0.00 |
|
R7510:Or13c7
|
UTSW |
4 |
43,854,482 (GRCm39) |
missense |
probably benign |
0.20 |
|
R8013:Or13c7
|
UTSW |
4 |
43,854,958 (GRCm39) |
missense |
probably benign |
0.00 |
|
R8014:Or13c7
|
UTSW |
4 |
43,854,958 (GRCm39) |
missense |
probably benign |
0.00 |
|
R8312:Or13c7
|
UTSW |
4 |
43,854,461 (GRCm39) |
missense |
probably benign |
0.04 |
|
R9116:Or13c7
|
UTSW |
4 |
43,854,602 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9636:Or13c7
|
UTSW |
4 |
43,854,898 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9643:Or13c7
|
UTSW |
4 |
43,855,183 (GRCm39) |
missense |
probably benign |
0.31 |
|
W0251:Or13c7
|
UTSW |
4 |
43,855,058 (GRCm39) |
missense |
probably benign |
0.42 |
|
| Predicted Primers |
PCR Primer
(F):5'- GATGATGTACCTGGTGATCCTG -3'
(R):5'- CCGCATTGCCAAAGATGTCTG -3'
Sequencing Primer
(F):5'- TGGTGATCCTGCTGGGCAAC -3'
(R):5'- TTGCCAAAGATGTCTGCACTAC -3'
|
| Posted On |
2016-07-22 |
Incidental Mutation