Mutagenetix > Incidental Mutation

Incidental Mutation 'R0417:Boc'

40437

Institutional Source

Beutler Lab

Gene Symbol

Boc

Ensembl Gene

ENSMUSG00000022687

Gene Name

biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein

Synonyms

MMRRC Submission

038619-MU

Accession Numbers

Is this an essential gene?

Non essential (E-score: 0.000) question?

Stock #

R0417 (G1)

Quality Score

116

Status

Not validated

Chromosome

Chromosomal Location

44485049-44558897 bp(-) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 44520234 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Threonine to Alanine at position 118 (T118A)

Ref Sequence

ENSEMBL: ENSMUSP00000110281 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000114634]

AlphaFold

no structure available at present

Predicted Effect

probably benign
Transcript: ENSMUST00000023370
AA Change: T118A

PolyPhen 2 Score 0.009 (Sensitivity: 0.96; Specificity: 0.77)

SMART Domains

Protein: ENSMUSP00000023370
Gene: ENSMUSG00000022687
AA Change: T118A

Domain	Start	End	E-Value	Type
signal peptide	1	25	N/A	INTRINSIC
IGc2	43	108	4.36e-4	SMART
IG	130	217	8.99e-6	SMART
IGc2	238	301	3.94e-11	SMART
IGc2	330	393	1.46e-14	SMART
low complexity region	423	433	N/A	INTRINSIC
FN3	467	553	1.14e-5	SMART
FN3	601	685	3.53e-11	SMART
FN3	707	794	4.25e-5	SMART
low complexity region	813	829	N/A	INTRINSIC
transmembrane domain	851	873	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000114634
AA Change: T118A

PolyPhen 2 Score 0.159 (Sensitivity: 0.92; Specificity: 0.87)

SMART Domains

Protein: ENSMUSP00000110281
Gene: ENSMUSG00000022687
AA Change: T118A

Domain	Start	End	E-Value	Type
signal peptide	1	25	N/A	INTRINSIC
IGc2	43	108	4.36e-4	SMART
IG	130	217	8.99e-6	SMART
IGc2	238	301	3.94e-11	SMART
IGc2	330	393	1.46e-14	SMART
low complexity region	423	433	N/A	INTRINSIC
FN3	467	553	1.14e-5	SMART
FN3	601	685	3.53e-11	SMART
FN3	707	794	4.25e-5	SMART
low complexity region	813	829	N/A	INTRINSIC
transmembrane domain	851	873	N/A	INTRINSIC

Coding Region Coverage

1x: 99.2%
3x: 98.6%
10x: 97.1%
20x: 95.1%

Validation Efficiency

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene is a member of the immunoglobulin/fibronectin type III repeat family. It is a component of a cell-surface receptor complex that mediates cell-cell interactions between muscle precursor cells, and promotes myogenic differentiation. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Sep 2014]
PHENOTYPE: Mice homozygous for a null mutation display abnormal commissural axon projections. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 75 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1700027J19Rik	A	G	7: 4,151,483	L102P	probably damaging	Het
1700030K09Rik	A	G	8: 72,445,400	K217R	probably damaging	Het
1810024B03Rik	A	G	2: 127,186,944	Y112H	probably damaging	Het
A430078G23Rik	T	C	8: 3,388,957		probably benign	Het
Acot2	T	C	12: 83,990,613	Y234H	probably benign	Het
Alox12e	C	T	11: 70,321,865	V53I	probably benign	Het
Ankrd50	T	C	3: 38,456,361	H619R	probably damaging	Het
Arfgef3	A	T	10: 18,603,511	L1452Q	probably damaging	Het
Arhgap42	T	C	9: 9,180,033	S82G	possibly damaging	Het
Bicra	C	A	7: 15,972,322	R1398L	probably damaging	Het
Btnl9	A	G	11: 49,175,595	Y381H	probably damaging	Het
Cbln3	T	G	14: 55,884,129	E20A	probably benign	Het
Csrnp3	A	G	2: 66,019,543	Y171C	probably benign	Het
Cyp2d9	A	T	15: 82,455,951	I181F	probably damaging	Het
Cyp7b1	T	A	3: 18,096,691	T295S	probably damaging	Het
Dbn1	C	T	13: 55,474,916	E585K	probably damaging	Het
Dok1	A	T	6: 83,031,569	D377E	probably damaging	Het
Eed	A	T	7: 89,971,552	Y87*	probably null	Het
Entpd3	T	C	9: 120,557,421	V156A	probably damaging	Het
Exo5	T	A	4: 120,922,072	T199S	probably damaging	Het
Extl2	T	C	3: 116,024,357	I106T	probably benign	Het
Ezh2	A	G	6: 47,551,726	C291R	probably benign	Het
Flvcr1	A	T	1: 191,011,219	M466K	probably benign	Het
Fras1	G	T	5: 96,691,372	M1583I	probably benign	Het
Fzd9	G	T	5: 135,249,619	R471S	probably damaging	Het
Galr1	A	T	18: 82,405,540	F204Y	probably damaging	Het
Gm38394	A	T	1: 133,658,538	S354T	probably benign	Het
Gna11	A	T	10: 81,530,904	I324N	probably damaging	Het
Gucy1a2	A	G	9: 3,759,484	E430G	possibly damaging	Het
Hhatl	C	T	9: 121,788,762	A254T	probably benign	Het
Ikzf1	A	C	11: 11,769,352	N353T	probably benign	Het
Il7	T	A	3: 7,576,027	T110S	probably damaging	Het
Keg1	A	G	19: 12,711,060	N53D	probably damaging	Het
Klhl21	T	C	4: 152,015,507	I558T	probably damaging	Het
Lca5l	G	A	16: 96,162,653	T357M	probably damaging	Het
Lrba	T	C	3: 86,715,654	S2448P	probably damaging	Het
Map3k6	T	A	4: 133,248,082	Y709*	probably null	Het
Megf6	A	G	4: 154,267,967	E1261G	probably benign	Het
Mettl3	C	T	14: 52,296,698	G473D	probably damaging	Het
Mga	A	G	2: 119,902,790	I40V	probably damaging	Het
Mmp13	T	A	9: 7,276,602	D232E	probably benign	Het
Nampt	T	C	12: 32,833,101	V95A	probably benign	Het
Nbeal1	T	C	1: 60,247,734	V905A	probably benign	Het
Nomo1	A	T	7: 46,068,698	E840V	possibly damaging	Het
Nprl2	A	T	9: 107,543,298	I101F	probably damaging	Het
Nup160	A	T	2: 90,735,427	I1378F	possibly damaging	Het
Ogdhl	T	C	14: 32,326,979	S69P	probably damaging	Het
Olfr1105	A	T	2: 87,033,445	Y259N	probably damaging	Het
Olfr1240	C	A	2: 89,440,175	V35L	possibly damaging	Het
Olfr1283	A	G	2: 111,369,105	S158G	possibly damaging	Het
Olfr1390	T	A	11: 49,340,673	I47N	possibly damaging	Het
Olfr143	T	C	9: 38,253,864	F149S	probably benign	Het
Olfr870	G	A	9: 20,171,214	A119V	probably damaging	Het
Olfr894	A	G	9: 38,219,455	I211V	probably benign	Het
Osbpl3	C	T	6: 50,348,018	V167I	probably benign	Het
Pclo	T	A	5: 14,713,022	H3836Q	unknown	Het
Prkcg	A	T	7: 3,304,304		probably null	Het
Ror1	A	T	4: 100,412,000	H345L	possibly damaging	Het
Slc36a2	C	T	11: 55,181,544		probably null	Het
Slc40a1	G	A	1: 45,911,374	P306L	possibly damaging	Het
Slc9a8	C	A	2: 167,457,344	T239K	probably benign	Het
Snapc3	A	G	4: 83,450,162	I299V	probably benign	Het
Sp3	G	A	2: 72,971,501	A56V	possibly damaging	Het
Spag17	T	A	3: 100,065,554	S1361T	probably benign	Het
Sptbn2	A	G	19: 4,737,926	T978A	probably benign	Het
Stom	C	A	2: 35,321,632	V126F	probably damaging	Het
Stpg2	A	G	3: 139,218,321	T162A	probably damaging	Het
Stxbp6	G	A	12: 44,902,957	T63M	probably damaging	Het
Tatdn1	A	C	15: 58,921,350	I69S	probably benign	Het
Tbata	A	T	10: 61,180,339	D198V	probably damaging	Het
Tbc1d5	T	C	17: 50,756,705	I638V	probably benign	Het
Tomm70a	A	G	16: 57,149,903	D548G	probably benign	Het
Ust	A	G	10: 8,245,936	F303L	probably damaging	Het
Vps13d	A	G	4: 144,976,560	S4306P	probably benign	Het
Zfp691	A	G	4: 119,170,496	S180P	possibly damaging	Het

Other mutations in Boc

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00799:Boc	APN	16	44492955	missense	probably benign	0.00
IGL00981:Boc	APN	16	44491801	missense	probably damaging	0.99
IGL01820:Boc	APN	16	44491872	missense	possibly damaging	0.88
IGL03114:Boc	APN	16	44486752	missense	probably benign	0.38
IGL03195:Boc	APN	16	44492821	missense	probably damaging	0.99
R0006:Boc	UTSW	16	44496449	missense	probably benign	0.41
R0142:Boc	UTSW	16	44490241	missense	probably damaging	1.00
R1066:Boc	UTSW	16	44490684	critical splice acceptor site	probably null
R1248:Boc	UTSW	16	44520473	missense	probably benign	0.03
R1438:Boc	UTSW	16	44488746	splice site	probably null
R1506:Boc	UTSW	16	44503565	missense	probably damaging	1.00
R1729:Boc	UTSW	16	44496419	missense	probably benign	0.00
R1784:Boc	UTSW	16	44496419	missense	probably benign	0.00
R2004:Boc	UTSW	16	44501644	critical splice donor site	probably null
R2441:Boc	UTSW	16	44488623	missense	probably damaging	1.00
R2863:Boc	UTSW	16	44492960	missense	probably benign	0.03
R3885:Boc	UTSW	16	44487613	splice site	probably benign
R4201:Boc	UTSW	16	44490618	missense	probably damaging	1.00
R4239:Boc	UTSW	16	44491884	missense	probably damaging	1.00
R4382:Boc	UTSW	16	44491182	missense	probably damaging	1.00
R4384:Boc	UTSW	16	44491182	missense	probably damaging	1.00
R4385:Boc	UTSW	16	44491182	missense	probably damaging	1.00
R4684:Boc	UTSW	16	44500380	missense	probably benign	0.07
R4776:Boc	UTSW	16	44487721	missense	probably damaging	0.99
R4788:Boc	UTSW	16	44500433	missense	probably damaging	1.00
R4830:Boc	UTSW	16	44490157	missense	probably damaging	1.00
R5000:Boc	UTSW	16	44490154	missense	probably damaging	1.00
R5567:Boc	UTSW	16	44492824	missense	probably damaging	1.00
R5570:Boc	UTSW	16	44492824	missense	probably damaging	1.00
R5645:Boc	UTSW	16	44499661	missense	probably damaging	0.99
R5651:Boc	UTSW	16	44521195	missense	probably benign	0.00
R5881:Boc	UTSW	16	44490651	missense	probably damaging	1.00
R6021:Boc	UTSW	16	44488654	missense	probably benign	0.00
R6085:Boc	UTSW	16	44488607	missense	probably damaging	1.00
R6188:Boc	UTSW	16	44499548	missense	possibly damaging	0.67
R6295:Boc	UTSW	16	44492348	missense	probably benign	0.05
R6366:Boc	UTSW	16	44487652	missense	probably benign	0.04
R6626:Boc	UTSW	16	44520440	missense	possibly damaging	0.47
R6629:Boc	UTSW	16	44492361	missense	probably benign	0.11
R6707:Boc	UTSW	16	44500616	missense	possibly damaging	0.71
R6819:Boc	UTSW	16	44492825	missense	probably damaging	0.99
R6904:Boc	UTSW	16	44491791	missense	probably damaging	1.00
R7260:Boc	UTSW	16	44490170	missense
R7353:Boc	UTSW	16	44485737	missense	unknown
R7458:Boc	UTSW	16	44486756	missense
R7671:Boc	UTSW	16	44491849	missense
R8283:Boc	UTSW	16	44520437	missense	noncoding transcript
R8753:Boc	UTSW	16	44500412	missense
R8886:Boc	UTSW	16	44499443	missense
R8906:Boc	UTSW	16	44503568	missense
R9204:Boc	UTSW	16	44487714	missense
R9238:Boc	UTSW	16	44490658	missense
R9400:Boc	UTSW	16	44499481	missense
R9623:Boc	UTSW	16	44501655	missense
R9786:Boc	UTSW	16	44491329	missense
RF028:Boc	UTSW	16	44496433	frame shift	probably null

Predicted Primers

PCR Primer
(F):5'- TTGAGCAGCCACCATGTTACCC -3'
(R):5'- ATGAGGTTCCTCAGGTCACAGTCC -3'

Sequencing Primer
(F):5'- GTTACCCTGAAAAATGTCAGCAG -3'
(R):5'- ATGTCCACTGTCCAGAAGCTG -3'

Posted On

2013-05-23