Incidental Mutation 'R5318:Or1x2'
ID 405937
Institutional Source Beutler Lab
Gene Symbol Or1x2
Ensembl Gene ENSMUSG00000059397
Gene Name olfactory receptor family 1 subfamily X member 2
Synonyms GA_x6K02T2QP88-4411197-4410256, MOR126-1, Olfr54, F3
MMRRC Submission 042901-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.058) question?
Stock # R5318 (G1)
Quality Score 225
Status Not validated
Chromosome 11
Chromosomal Location 50917831-50918772 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to C at 50918420 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Valine to Alanine at position 197 (V197A)
Ref Sequence ENSEMBL: ENSMUSP00000150809 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000072152] [ENSMUST00000215409] [ENSMUST00000217480]
AlphaFold Q8VFE6
Predicted Effect probably benign
Transcript: ENSMUST00000072152
AA Change: V197A

PolyPhen 2 Score 0.013 (Sensitivity: 0.96; Specificity: 0.78)
SMART Domains Protein: ENSMUSP00000072016
Gene: ENSMUSG00000059397
AA Change: V197A

DomainStartEndE-ValueType
Pfam:7tm_4 33 309 3e-57 PFAM
Pfam:7TM_GPCR_Srsx 37 306 8.8e-6 PFAM
Pfam:7tm_1 43 291 2.7e-27 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000215409
AA Change: V197A

PolyPhen 2 Score 0.013 (Sensitivity: 0.96; Specificity: 0.78)
Predicted Effect probably benign
Transcript: ENSMUST00000217480
AA Change: V197A

PolyPhen 2 Score 0.013 (Sensitivity: 0.96; Specificity: 0.78)
Coding Region Coverage
  • 1x: 99.1%
  • 3x: 98.4%
  • 10x: 96.5%
  • 20x: 92.7%
Validation Efficiency
MGI Phenotype FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
Allele List at MGI
Other mutations in this stock
Total: 53 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
2300002M23Rik G A 17: 35,878,883 (GRCm39) E74K possibly damaging Het
Anapc15 C T 7: 101,547,810 (GRCm39) P68L probably damaging Het
Ankfn1 A G 11: 89,282,754 (GRCm39) S298P probably damaging Het
Arfgef2 A C 2: 166,715,891 (GRCm39) K1393N probably damaging Het
Atp4a T A 7: 30,414,754 (GRCm39) V181E probably damaging Het
Bin3 A G 14: 70,371,961 (GRCm39) D134G possibly damaging Het
Cabs1 A G 5: 88,128,425 (GRCm39) T359A possibly damaging Het
Cblb A T 16: 52,006,561 (GRCm39) K754N possibly damaging Het
Ccdc153 A T 9: 44,157,062 (GRCm39) R135* probably null Het
Cel T C 2: 28,447,720 (GRCm39) E398G possibly damaging Het
Clip1 G A 5: 123,751,147 (GRCm39) probably benign Het
Dnase2b C A 3: 146,288,210 (GRCm39) R295L probably benign Het
Dnm3 G A 1: 161,839,376 (GRCm39) Q194* probably null Het
Dtx2 T A 5: 136,040,954 (GRCm39) S120T possibly damaging Het
Fat3 A T 9: 16,287,925 (GRCm39) S533T probably damaging Het
Foxred2 T C 15: 77,836,598 (GRCm39) I306V probably benign Het
Gdpd5 A T 7: 99,102,234 (GRCm39) T278S probably benign Het
Gli2 T A 1: 118,772,200 (GRCm39) T502S probably damaging Het
Gm21830 A T 2: 67,263,158 (GRCm39) probably null Het
Gm5617 T A 9: 48,407,211 (GRCm39) I115N possibly damaging Het
Gpr75 G T 11: 30,842,459 (GRCm39) A455S probably benign Het
Grik3 A G 4: 125,587,929 (GRCm39) E683G probably damaging Het
Grin2b T C 6: 135,710,916 (GRCm39) I877V probably damaging Het
Gsg1l2 G T 11: 67,673,347 (GRCm39) C109F possibly damaging Het
H2-Q4 G A 17: 35,602,287 (GRCm39) V341I possibly damaging Het
Hjurp GT GTT 1: 88,194,246 (GRCm39) probably null Het
Kif5c A G 2: 49,561,840 (GRCm39) K68R probably benign Het
Lct T A 1: 128,232,109 (GRCm39) H580L probably damaging Het
Lrrtm4 A G 6: 79,999,495 (GRCm39) I302M probably damaging Het
Mef2b A T 8: 70,619,493 (GRCm39) R228W probably damaging Het
Mtus2 T A 5: 148,013,382 (GRCm39) D58E probably benign Het
Myh15 T G 16: 48,930,834 (GRCm39) S603A probably damaging Het
Or8d1 C T 9: 38,766,744 (GRCm39) P129S probably damaging Het
Or8s2 A G 15: 98,276,523 (GRCm39) I156T possibly damaging Het
P2rx4 G A 5: 122,857,211 (GRCm39) C149Y probably null Het
Pramel51 A T 12: 88,142,998 (GRCm39) C207S probably benign Het
Proca1 T A 11: 78,092,683 (GRCm39) V43E possibly damaging Het
Rftn1 G T 17: 50,301,486 (GRCm39) N454K probably benign Het
Rrp15 T C 1: 186,453,743 (GRCm39) T235A probably benign Het
Serpina6 T C 12: 103,620,221 (GRCm39) E176G possibly damaging Het
Shprh T G 10: 11,042,301 (GRCm39) I761M probably benign Het
Smg1 A T 7: 117,759,427 (GRCm39) probably benign Het
Snupn T C 9: 56,864,345 (GRCm39) S15P probably damaging Het
Tbc1d15 A T 10: 115,044,874 (GRCm39) Y509* probably null Het
Tcf4 T C 18: 69,598,501 (GRCm39) V72A probably benign Het
Tdrd3 T C 14: 87,714,899 (GRCm39) probably null Het
Tm9sf4 T A 2: 153,029,576 (GRCm39) V175D probably benign Het
Vmn1r201 T C 13: 22,659,092 (GRCm39) L102P probably damaging Het
Wdfy4 T A 14: 32,800,300 (GRCm39) N1788I possibly damaging Het
Xpc A C 6: 91,469,992 (GRCm39) V744G probably damaging Het
Xrcc6 T C 15: 81,921,708 (GRCm39) F178L probably damaging Het
Zbed6 A G 1: 133,585,853 (GRCm39) S495P possibly damaging Het
Zfyve26 A G 12: 79,317,624 (GRCm39) V1196A probably benign Het
Other mutations in Or1x2
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01514:Or1x2 APN 11 50,918,416 (GRCm39) nonsense probably null
IGL01875:Or1x2 APN 11 50,918,202 (GRCm39) missense probably damaging 1.00
IGL01936:Or1x2 APN 11 50,918,162 (GRCm39) missense probably benign 0.02
IGL02165:Or1x2 APN 11 50,918,470 (GRCm39) missense probably benign 0.00
IGL02474:Or1x2 APN 11 50,918,192 (GRCm39) missense probably damaging 1.00
IGL02706:Or1x2 APN 11 50,918,091 (GRCm39) missense probably damaging 0.99
IGL02983:Or1x2 APN 11 50,918,207 (GRCm39) missense probably damaging 1.00
IGL03037:Or1x2 APN 11 50,918,117 (GRCm39) missense probably damaging 1.00
IGL03086:Or1x2 APN 11 50,918,557 (GRCm39) missense probably damaging 1.00
R0114:Or1x2 UTSW 11 50,918,431 (GRCm39) missense probably benign 0.34
R1201:Or1x2 UTSW 11 50,917,937 (GRCm39) missense probably damaging 0.99
R1353:Or1x2 UTSW 11 50,917,833 (GRCm39) start codon destroyed probably null 0.33
R1624:Or1x2 UTSW 11 50,917,952 (GRCm39) missense probably damaging 1.00
R1961:Or1x2 UTSW 11 50,918,302 (GRCm39) missense probably benign 0.00
R5335:Or1x2 UTSW 11 50,918,161 (GRCm39) missense probably benign 0.00
R6409:Or1x2 UTSW 11 50,918,015 (GRCm39) missense probably damaging 1.00
R7097:Or1x2 UTSW 11 50,918,428 (GRCm39) missense probably benign 0.09
R8243:Or1x2 UTSW 11 50,918,138 (GRCm39) missense probably benign
Predicted Primers PCR Primer
(F):5'- GACAGATTTGTGGCCATATGC -3'
(R):5'- TGCCATAGAACAGAGTGACCAC -3'

Sequencing Primer
(F):5'- GTGGCCATATGCTACCCAC -3'
(R):5'- CAGACAAGTGTGAGCTACATGTG -3'
Posted On 2016-07-22