Incidental Mutation 'IGL02876:Vmn1r202'
ID |
406221 |
Institutional Source |
Australian Phenomics Network
(link to record)
|
Gene Symbol |
Vmn1r202
|
Ensembl Gene |
ENSMUSG00000094379 |
Gene Name |
vomeronasal 1 receptor 202 |
Synonyms |
V1ri7 |
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.088)
|
Stock # |
IGL02876
|
Quality Score |
|
Status
|
|
Chromosome |
13 |
Chromosomal Location |
22685507-22686415 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
G to A
at 22685640 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Threonine to Isoleucine
at position 259
(T259I)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000154314
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000078642]
[ENSMUST00000228020]
|
AlphaFold |
Q8R259 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000078642
AA Change: T259I
PolyPhen 2
Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)
|
SMART Domains |
Protein: ENSMUSP00000077711 Gene: ENSMUSG00000094379 AA Change: T259I
Domain | Start | End | E-Value | Type |
Pfam:TAS2R
|
5 |
301 |
2.2e-11 |
PFAM |
Pfam:V1R
|
35 |
300 |
5.6e-44 |
PFAM |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000228020
AA Change: T259I
PolyPhen 2
Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)
|
Meta Mutation Damage Score |
0.0898 |
Coding Region Coverage |
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 42 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Aadacl4fm2 |
A |
G |
4: 144,282,343 (GRCm39) |
Y150H |
probably damaging |
Het |
Abcb5 |
A |
G |
12: 118,883,576 (GRCm39) |
V564A |
probably damaging |
Het |
Adamts15 |
A |
T |
9: 30,815,818 (GRCm39) |
N679K |
probably damaging |
Het |
Angpt1 |
T |
G |
15: 42,290,373 (GRCm39) |
D497A |
possibly damaging |
Het |
Asap2 |
A |
G |
12: 21,308,164 (GRCm39) |
K849R |
probably benign |
Het |
Aspm |
T |
C |
1: 139,401,391 (GRCm39) |
V1137A |
probably damaging |
Het |
Atp12a |
A |
G |
14: 56,610,746 (GRCm39) |
I297V |
probably benign |
Het |
Atp2a2 |
A |
G |
5: 122,604,071 (GRCm39) |
V454A |
probably benign |
Het |
Carmil1 |
T |
A |
13: 24,338,651 (GRCm39) |
|
probably benign |
Het |
Csmd2 |
A |
T |
4: 128,215,128 (GRCm39) |
K517* |
probably null |
Het |
Csmd3 |
A |
T |
15: 47,469,492 (GRCm39) |
|
probably benign |
Het |
Cyp2d11 |
T |
A |
15: 82,273,697 (GRCm39) |
Q427L |
possibly damaging |
Het |
Eml5 |
C |
T |
12: 98,825,100 (GRCm39) |
V706M |
probably damaging |
Het |
Entpd8 |
A |
C |
2: 24,975,072 (GRCm39) |
S428R |
probably benign |
Het |
Gm10283 |
T |
C |
8: 60,954,253 (GRCm39) |
|
probably benign |
Het |
Gpatch3 |
T |
A |
4: 133,307,995 (GRCm39) |
V363E |
probably damaging |
Het |
Hoxb5 |
T |
A |
11: 96,194,594 (GRCm39) |
M52K |
probably damaging |
Het |
Ift52 |
T |
C |
2: 162,878,627 (GRCm39) |
V307A |
probably benign |
Het |
Igkv1-115 |
T |
C |
6: 68,138,424 (GRCm39) |
|
noncoding transcript |
Het |
Kdm5a |
T |
C |
6: 120,367,605 (GRCm39) |
|
probably benign |
Het |
Lama1 |
T |
A |
17: 68,057,687 (GRCm39) |
|
probably null |
Het |
Lrp6 |
G |
A |
6: 134,433,077 (GRCm39) |
P1418L |
probably benign |
Het |
Mill2 |
T |
C |
7: 18,590,432 (GRCm39) |
F156L |
probably damaging |
Het |
Mnat1 |
A |
G |
12: 73,217,378 (GRCm39) |
R85G |
probably damaging |
Het |
Myrip |
A |
T |
9: 120,261,740 (GRCm39) |
D451V |
probably damaging |
Het |
Or1e1f |
A |
T |
11: 73,855,539 (GRCm39) |
Y35F |
possibly damaging |
Het |
Pdzph1 |
C |
A |
17: 59,281,064 (GRCm39) |
S406I |
probably benign |
Het |
Ptprb |
A |
G |
10: 116,184,116 (GRCm39) |
|
probably benign |
Het |
Rxfp4 |
T |
A |
3: 88,559,742 (GRCm39) |
R236S |
possibly damaging |
Het |
Ryr2 |
T |
C |
13: 11,722,679 (GRCm39) |
M2604V |
probably benign |
Het |
Setd1a |
G |
A |
7: 127,377,673 (GRCm39) |
|
probably benign |
Het |
Spata33 |
A |
T |
8: 123,948,719 (GRCm39) |
H88L |
probably damaging |
Het |
Spcs3 |
A |
T |
8: 54,979,486 (GRCm39) |
N98K |
probably damaging |
Het |
Srgap3 |
A |
G |
6: 112,748,414 (GRCm39) |
S413P |
probably damaging |
Het |
Stap2 |
T |
C |
17: 56,306,961 (GRCm39) |
R239G |
probably benign |
Het |
Surf6 |
A |
G |
2: 26,782,638 (GRCm39) |
Y230H |
probably damaging |
Het |
Tasp1 |
C |
T |
2: 139,676,283 (GRCm39) |
V382M |
probably benign |
Het |
Tnc |
G |
T |
4: 63,933,338 (GRCm39) |
A642E |
possibly damaging |
Het |
Vmn2r110 |
T |
A |
17: 20,794,558 (GRCm39) |
T704S |
probably damaging |
Het |
Vtcn1 |
A |
T |
3: 100,791,145 (GRCm39) |
D61V |
probably damaging |
Het |
Zc3h12d |
G |
A |
10: 7,738,364 (GRCm39) |
M223I |
probably damaging |
Het |
Zfp592 |
T |
A |
7: 80,687,875 (GRCm39) |
S934T |
probably benign |
Het |
|
Other mutations in Vmn1r202 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01472:Vmn1r202
|
APN |
13 |
22,686,159 (GRCm39) |
missense |
possibly damaging |
0.95 |
IGL01516:Vmn1r202
|
APN |
13 |
22,685,632 (GRCm39) |
missense |
possibly damaging |
0.57 |
IGL01722:Vmn1r202
|
APN |
13 |
22,685,890 (GRCm39) |
missense |
probably benign |
0.00 |
IGL02641:Vmn1r202
|
APN |
13 |
22,686,274 (GRCm39) |
missense |
probably benign |
0.34 |
IGL02863:Vmn1r202
|
APN |
13 |
22,685,640 (GRCm39) |
missense |
probably benign |
0.00 |
IGL02891:Vmn1r202
|
APN |
13 |
22,685,640 (GRCm39) |
missense |
probably benign |
0.00 |
IGL02943:Vmn1r202
|
APN |
13 |
22,686,364 (GRCm39) |
missense |
probably benign |
0.01 |
IGL03057:Vmn1r202
|
APN |
13 |
22,685,640 (GRCm39) |
missense |
probably benign |
0.00 |
IGL03114:Vmn1r202
|
APN |
13 |
22,685,500 (GRCm39) |
utr 3 prime |
probably benign |
|
IGL03114:Vmn1r202
|
APN |
13 |
22,685,640 (GRCm39) |
missense |
probably benign |
0.00 |
IGL03143:Vmn1r202
|
APN |
13 |
22,685,640 (GRCm39) |
missense |
probably benign |
0.00 |
IGL03159:Vmn1r202
|
APN |
13 |
22,685,640 (GRCm39) |
missense |
probably benign |
0.00 |
IGL03097:Vmn1r202
|
UTSW |
13 |
22,685,640 (GRCm39) |
missense |
probably benign |
0.00 |
R0611:Vmn1r202
|
UTSW |
13 |
22,685,824 (GRCm39) |
missense |
probably damaging |
1.00 |
R1350:Vmn1r202
|
UTSW |
13 |
22,685,886 (GRCm39) |
missense |
probably benign |
0.04 |
R1666:Vmn1r202
|
UTSW |
13 |
22,685,540 (GRCm39) |
missense |
possibly damaging |
0.94 |
R1668:Vmn1r202
|
UTSW |
13 |
22,685,540 (GRCm39) |
missense |
possibly damaging |
0.94 |
R1803:Vmn1r202
|
UTSW |
13 |
22,686,313 (GRCm39) |
missense |
probably benign |
0.00 |
R2035:Vmn1r202
|
UTSW |
13 |
22,685,772 (GRCm39) |
missense |
probably damaging |
0.98 |
R2112:Vmn1r202
|
UTSW |
13 |
22,685,904 (GRCm39) |
missense |
possibly damaging |
0.76 |
R2145:Vmn1r202
|
UTSW |
13 |
22,685,953 (GRCm39) |
missense |
possibly damaging |
0.79 |
R3026:Vmn1r202
|
UTSW |
13 |
22,685,932 (GRCm39) |
missense |
probably benign |
0.03 |
R3808:Vmn1r202
|
UTSW |
13 |
22,686,070 (GRCm39) |
missense |
possibly damaging |
0.83 |
R4714:Vmn1r202
|
UTSW |
13 |
22,685,977 (GRCm39) |
missense |
probably damaging |
1.00 |
R5016:Vmn1r202
|
UTSW |
13 |
22,686,375 (GRCm39) |
missense |
probably damaging |
1.00 |
R5124:Vmn1r202
|
UTSW |
13 |
22,685,920 (GRCm39) |
missense |
probably benign |
0.01 |
R6136:Vmn1r202
|
UTSW |
13 |
22,685,632 (GRCm39) |
missense |
possibly damaging |
0.90 |
R6365:Vmn1r202
|
UTSW |
13 |
22,686,374 (GRCm39) |
missense |
probably benign |
0.12 |
R6982:Vmn1r202
|
UTSW |
13 |
22,685,917 (GRCm39) |
missense |
probably benign |
0.02 |
R7293:Vmn1r202
|
UTSW |
13 |
22,685,872 (GRCm39) |
missense |
probably benign |
0.00 |
R7502:Vmn1r202
|
UTSW |
13 |
22,686,188 (GRCm39) |
missense |
probably damaging |
1.00 |
R7603:Vmn1r202
|
UTSW |
13 |
22,685,790 (GRCm39) |
missense |
probably damaging |
1.00 |
R7672:Vmn1r202
|
UTSW |
13 |
22,685,850 (GRCm39) |
missense |
probably benign |
0.45 |
R7822:Vmn1r202
|
UTSW |
13 |
22,686,241 (GRCm39) |
missense |
probably damaging |
1.00 |
R7954:Vmn1r202
|
UTSW |
13 |
22,685,871 (GRCm39) |
missense |
probably benign |
0.01 |
R8026:Vmn1r202
|
UTSW |
13 |
22,686,314 (GRCm39) |
missense |
possibly damaging |
0.65 |
R8419:Vmn1r202
|
UTSW |
13 |
22,685,985 (GRCm39) |
missense |
probably damaging |
1.00 |
R9079:Vmn1r202
|
UTSW |
13 |
22,685,602 (GRCm39) |
missense |
probably benign |
0.00 |
R9194:Vmn1r202
|
UTSW |
13 |
22,686,316 (GRCm39) |
missense |
possibly damaging |
0.48 |
|
Posted On |
2016-08-02 |