Incidental Mutation 'IGL02990:Vmn1r15'
ID 406879
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Vmn1r15
Ensembl Gene ENSMUSG00000115199
Gene Name vomeronasal 1 receptor 15
Synonyms V1rc6
Accession Numbers
Essential gene? Probably non essential (E-score: 0.145) question?
Stock # IGL02990
Quality Score
Status
Chromosome 6
Chromosomal Location 57235134-57236033 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 57235593 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Threonine to Alanine at position 154 (T154A)
Ref Sequence ENSEMBL: ENSMUSP00000154252 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000071304] [ENSMUST00000228297]
AlphaFold Q14C10
Predicted Effect probably benign
Transcript: ENSMUST00000071304
AA Change: T154A

PolyPhen 2 Score 0.141 (Sensitivity: 0.92; Specificity: 0.86)
SMART Domains Protein: ENSMUSP00000071272
Gene: ENSMUSG00000115236
AA Change: T154A

DomainStartEndE-ValueType
Pfam:V1R 28 293 4.5e-56 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000228297
AA Change: T154A

PolyPhen 2 Score 0.141 (Sensitivity: 0.92; Specificity: 0.86)
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 42 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Alox12b G T 11: 69,054,032 (GRCm39) V205F probably benign Het
Ampd3 T C 7: 110,407,170 (GRCm39) probably benign Het
Arhgef18 G A 8: 3,494,904 (GRCm39) V388I probably benign Het
Atp6v1c2 C T 12: 17,344,741 (GRCm39) V169I probably damaging Het
Ccdc88b G T 19: 6,824,777 (GRCm39) L1328I probably damaging Het
Ces1d C A 8: 93,896,346 (GRCm39) probably null Het
Cluh G A 11: 74,558,591 (GRCm39) probably null Het
Cpsf7 C A 19: 10,509,159 (GRCm39) N23K probably benign Het
Cyp4x1 A T 4: 114,978,946 (GRCm39) F191L probably benign Het
Dcn A G 10: 97,345,835 (GRCm39) T216A probably benign Het
Drosha C T 15: 12,827,353 (GRCm39) probably benign Het
Foxn4 A G 5: 114,411,050 (GRCm39) S24P probably damaging Het
Gm11733 A T 11: 117,377,809 (GRCm39) probably null Het
Hapln1 A C 13: 89,749,725 (GRCm39) Y90S probably benign Het
Igf2r C A 17: 12,929,633 (GRCm39) probably benign Het
Jade2 A G 11: 51,722,074 (GRCm39) probably benign Het
Kcnh7 A T 2: 62,536,330 (GRCm39) L1084H probably benign Het
Kif1a T C 1: 92,966,985 (GRCm39) D1155G probably damaging Het
Llgl2 A G 11: 115,745,159 (GRCm39) M958V probably benign Het
Lrp2 A G 2: 69,271,740 (GRCm39) V4064A possibly damaging Het
Mau2 A G 8: 70,474,905 (GRCm39) probably benign Het
Mllt10 T C 2: 18,128,522 (GRCm39) probably benign Het
Myo15a A G 11: 60,370,266 (GRCm39) T1009A probably benign Het
Myo6 T C 9: 80,183,685 (GRCm39) probably null Het
Neil2 G T 14: 63,429,258 (GRCm39) H12N possibly damaging Het
Nrde2 T C 12: 100,108,355 (GRCm39) E412G probably damaging Het
Or14j3 C T 17: 37,900,559 (GRCm39) M228I probably benign Het
Or4c115 T C 2: 88,927,473 (GRCm39) Y266C possibly damaging Het
Patl2 T G 2: 121,954,978 (GRCm39) probably null Het
Pkhd1 T C 1: 20,593,187 (GRCm39) H1642R possibly damaging Het
Ppp6r1 A G 7: 4,646,022 (GRCm39) I199T possibly damaging Het
Prom2 T A 2: 127,370,734 (GRCm39) T817S probably benign Het
Slc49a4 C A 16: 35,555,861 (GRCm39) V200F possibly damaging Het
Slc9b1 A G 3: 135,100,744 (GRCm39) probably null Het
Sv2c A T 13: 96,224,886 (GRCm39) I141K probably damaging Het
Tas2r139 A T 6: 42,118,038 (GRCm39) I57F probably damaging Het
Tep1 A G 14: 51,105,703 (GRCm39) S106P possibly damaging Het
Tnni3k T C 3: 154,663,395 (GRCm39) D319G probably benign Het
Tom1l2 C T 11: 60,121,062 (GRCm39) D461N probably damaging Het
Ugt1a10 T C 1: 87,983,601 (GRCm39) L133S probably damaging Het
Usf2 T G 7: 30,654,732 (GRCm39) Q161P probably benign Het
Vmn2r95 C A 17: 18,672,298 (GRCm39) Y678* probably null Het
Other mutations in Vmn1r15
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01645:Vmn1r15 APN 6 57,235,547 (GRCm39) nonsense probably null
IGL02326:Vmn1r15 APN 6 57,235,255 (GRCm39) missense probably benign 0.02
IGL02431:Vmn1r15 APN 6 57,235,888 (GRCm39) missense possibly damaging 0.94
IGL02936:Vmn1r15 APN 6 57,235,803 (GRCm39) nonsense probably null
IGL03177:Vmn1r15 APN 6 57,235,458 (GRCm39) missense probably benign 0.27
IGL03382:Vmn1r15 APN 6 57,235,555 (GRCm39) missense probably benign 0.04
R0531:Vmn1r15 UTSW 6 57,235,236 (GRCm39) missense probably benign 0.10
R1858:Vmn1r15 UTSW 6 57,235,616 (GRCm39) missense probably benign 0.13
R2010:Vmn1r15 UTSW 6 57,235,269 (GRCm39) missense probably benign 0.02
R2055:Vmn1r15 UTSW 6 57,235,729 (GRCm39) missense possibly damaging 0.90
R2291:Vmn1r15 UTSW 6 57,235,677 (GRCm39) missense possibly damaging 0.93
R3697:Vmn1r15 UTSW 6 57,235,321 (GRCm39) missense possibly damaging 0.63
R5161:Vmn1r15 UTSW 6 57,235,497 (GRCm39) missense probably benign 0.00
R5884:Vmn1r15 UTSW 6 57,235,993 (GRCm39) missense probably damaging 0.99
R7287:Vmn1r15 UTSW 6 57,235,201 (GRCm39) missense possibly damaging 0.63
R7376:Vmn1r15 UTSW 6 57,235,342 (GRCm39) missense probably benign 0.11
R7773:Vmn1r15 UTSW 6 57,235,644 (GRCm39) missense probably benign 0.05
R7980:Vmn1r15 UTSW 6 57,235,399 (GRCm39) missense probably damaging 1.00
R8309:Vmn1r15 UTSW 6 57,235,635 (GRCm39) missense probably benign 0.01
R8753:Vmn1r15 UTSW 6 57,235,895 (GRCm39) missense probably benign 0.01
R8765:Vmn1r15 UTSW 6 57,235,585 (GRCm39) missense probably benign 0.01
R8812:Vmn1r15 UTSW 6 57,235,123 (GRCm39) start gained probably benign
Posted On 2016-08-02