Incidental Mutation 'IGL02993:Vmn2r57'
ID 407020
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Vmn2r57
Ensembl Gene ENSMUSG00000066537
Gene Name vomeronasal 2, receptor 57
Synonyms EG269902
Accession Numbers
Essential gene? Probably non essential (E-score: 0.113) question?
Stock # IGL02993
Quality Score
Status
Chromosome 7
Chromosomal Location 41399732-41448641 bp(-) (GRCm38)
Type of Mutation missense
DNA Base Change (assembly) T to A at 41428074 bp (GRCm38)
Zygosity Heterozygous
Amino Acid Change Threonine to Serine at position 223 (T223S)
Ref Sequence ENSEMBL: ENSMUSP00000125817 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000094532] [ENSMUST00000165029]
AlphaFold L7N269
Predicted Effect probably benign
Transcript: ENSMUST00000094532
Predicted Effect probably benign
Transcript: ENSMUST00000165029
AA Change: T223S

PolyPhen 2 Score 0.040 (Sensitivity: 0.94; Specificity: 0.83)
SMART Domains Protein: ENSMUSP00000125817
Gene: ENSMUSG00000066537
AA Change: T223S

DomainStartEndE-ValueType
signal peptide 1 18 N/A INTRINSIC
Pfam:ANF_receptor 77 471 1.4e-44 PFAM
Pfam:NCD3G 514 567 2.7e-23 PFAM
Pfam:7tm_3 600 835 1.8e-52 PFAM
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 35 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
1700022I11Rik T C 4: 42,971,719 Y351H probably damaging Het
5830411N06Rik A G 7: 140,296,573 T537A probably benign Het
Abcd3 A C 3: 121,774,010 I434S probably benign Het
Actr2 C T 11: 20,072,514 R319Q probably damaging Het
Atp13a5 G T 16: 29,293,504 Y606* probably null Het
Baiap3 C T 17: 25,250,082 probably null Het
Cers2 A G 3: 95,320,085 Y8C probably benign Het
Ces1g T A 8: 93,317,079 M411L probably benign Het
Chd6 A G 2: 161,052,384 probably benign Het
Cyp2d40 C A 15: 82,761,521 K94N probably benign Het
Ddx51 T C 5: 110,655,621 V323A possibly damaging Het
Dock1 G A 7: 134,744,298 V190I probably benign Het
Evc2 A G 5: 37,419,157 T1042A probably benign Het
Fat4 T A 3: 38,957,155 S2135T probably damaging Het
Gpat2 T C 2: 127,427,566 F46S probably damaging Het
Klhl38 T A 15: 58,322,455 K293* probably null Het
Map4k4 T C 1: 40,014,188 I916T probably damaging Het
Nrap T A 19: 56,345,533 K964M probably damaging Het
Osbpl5 T C 7: 143,699,334 probably null Het
Perm1 A G 4: 156,217,779 Q260R probably benign Het
Ralgapb T A 2: 158,437,394 N133K possibly damaging Het
Slfn9 T C 11: 82,981,196 S905G probably benign Het
Ssh2 C T 11: 77,453,544 T785I probably damaging Het
Stk16 C A 1: 75,213,004 Q69K probably damaging Het
Stk36 T C 1: 74,622,287 L491P probably benign Het
Stxbp2 A T 8: 3,641,971 I538F probably benign Het
Tcp11 T C 17: 28,070,516 N194D probably damaging Het
Trio C A 15: 27,830,239 probably benign Het
Ugt2b1 A G 5: 86,921,991 V297A possibly damaging Het
Ugt2b5 T G 5: 87,137,232 H282P probably damaging Het
Usp53 A G 3: 122,933,843 M1030T probably damaging Het
Vmn1r234 T A 17: 21,229,703 I293N probably damaging Het
Wdr20 G T 12: 110,794,308 E543* probably null Het
Zbtb25 T A 12: 76,349,417 N344Y probably damaging Het
Zcchc2 T C 1: 106,030,168 F790L probably damaging Het
Other mutations in Vmn2r57
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00159:Vmn2r57 APN 7 41,428,785 (GRCm38) missense probably benign
IGL01108:Vmn2r57 APN 7 41,427,584 (GRCm38) missense probably benign 0.01
IGL01112:Vmn2r57 APN 7 41,425,043 (GRCm38) missense probably damaging 1.00
IGL01516:Vmn2r57 APN 7 41,399,946 (GRCm38) missense probably damaging 1.00
IGL01880:Vmn2r57 APN 7 41,400,195 (GRCm38) missense possibly damaging 0.73
IGL02117:Vmn2r57 APN 7 41,400,450 (GRCm38) missense probably benign 0.00
IGL02500:Vmn2r57 APN 7 41,428,226 (GRCm38) missense probably benign
IGL02801:Vmn2r57 APN 7 41,448,632 (GRCm38) missense probably benign 0.13
IGL02996:Vmn2r57 APN 7 41,399,741 (GRCm38) missense probably benign 0.02
R0008:Vmn2r57 UTSW 7 41,400,652 (GRCm38) missense probably damaging 1.00
R0032:Vmn2r57 UTSW 7 41,399,733 (GRCm38) splice site probably null
R0305:Vmn2r57 UTSW 7 41,427,543 (GRCm38) missense probably benign 0.00
R0469:Vmn2r57 UTSW 7 41,427,792 (GRCm38) missense possibly damaging 0.58
R0510:Vmn2r57 UTSW 7 41,427,792 (GRCm38) missense possibly damaging 0.58
R0847:Vmn2r57 UTSW 7 41,428,801 (GRCm38) missense probably benign 0.00
R1025:Vmn2r57 UTSW 7 41,427,804 (GRCm38) missense probably benign 0.24
R1081:Vmn2r57 UTSW 7 41,428,211 (GRCm38) missense possibly damaging 0.47
R1479:Vmn2r57 UTSW 7 41,427,830 (GRCm38) missense possibly damaging 0.45
R1579:Vmn2r57 UTSW 7 41,400,124 (GRCm38) missense probably benign 0.38
R1764:Vmn2r57 UTSW 7 41,400,643 (GRCm38) missense probably damaging 1.00
R1848:Vmn2r57 UTSW 7 41,428,107 (GRCm38) missense probably damaging 1.00
R2006:Vmn2r57 UTSW 7 41,448,577 (GRCm38) missense probably benign 0.00
R2197:Vmn2r57 UTSW 7 41,428,825 (GRCm38) critical splice acceptor site probably null
R2242:Vmn2r57 UTSW 7 41,428,074 (GRCm38) missense probably benign 0.00
R2394:Vmn2r57 UTSW 7 41,400,195 (GRCm38) missense possibly damaging 0.73
R3937:Vmn2r57 UTSW 7 41,428,130 (GRCm38) missense probably damaging 0.97
R4193:Vmn2r57 UTSW 7 41,428,239 (GRCm38) missense probably benign
R4423:Vmn2r57 UTSW 7 41,426,640 (GRCm38) missense probably damaging 1.00
R4865:Vmn2r57 UTSW 7 41,400,468 (GRCm38) missense probably damaging 1.00
R4947:Vmn2r57 UTSW 7 41,400,495 (GRCm38) missense probably damaging 1.00
R5042:Vmn2r57 UTSW 7 41,428,662 (GRCm38) missense probably benign 0.06
R5084:Vmn2r57 UTSW 7 41,426,550 (GRCm38) critical splice donor site probably null
R5177:Vmn2r57 UTSW 7 41,400,240 (GRCm38) missense probably benign 0.31
R5192:Vmn2r57 UTSW 7 41,427,939 (GRCm38) missense probably damaging 0.96
R5289:Vmn2r57 UTSW 7 41,399,974 (GRCm38) missense probably damaging 0.99
R5745:Vmn2r57 UTSW 7 41,448,471 (GRCm38) missense possibly damaging 0.51
R6051:Vmn2r57 UTSW 7 41,448,472 (GRCm38) missense probably benign 0.00
R6155:Vmn2r57 UTSW 7 41,428,690 (GRCm38) missense probably benign 0.14
R6248:Vmn2r57 UTSW 7 41,399,860 (GRCm38) missense probably benign
R6381:Vmn2r57 UTSW 7 41,428,818 (GRCm38) missense probably benign 0.08
R7019:Vmn2r57 UTSW 7 41,428,665 (GRCm38) missense probably damaging 1.00
R7126:Vmn2r57 UTSW 7 41,399,794 (GRCm38) missense possibly damaging 0.93
R7146:Vmn2r57 UTSW 7 41,448,471 (GRCm38) missense possibly damaging 0.51
R7215:Vmn2r57 UTSW 7 41,400,286 (GRCm38) missense probably benign 0.00
R7432:Vmn2r57 UTSW 7 41,426,724 (GRCm38) missense probably benign 0.01
R7633:Vmn2r57 UTSW 7 41,425,089 (GRCm38) missense possibly damaging 0.76
R7811:Vmn2r57 UTSW 7 41,425,015 (GRCm38) nonsense probably null
R8025:Vmn2r57 UTSW 7 41,426,759 (GRCm38) missense probably benign 0.00
R8332:Vmn2r57 UTSW 7 41,400,253 (GRCm38) missense probably benign 0.01
R8345:Vmn2r57 UTSW 7 41,427,544 (GRCm38) missense possibly damaging 0.81
R8360:Vmn2r57 UTSW 7 41,400,216 (GRCm38) missense probably damaging 1.00
R8738:Vmn2r57 UTSW 7 41,427,596 (GRCm38) missense probably benign 0.00
R8758:Vmn2r57 UTSW 7 41,428,739 (GRCm38) missense probably damaging 1.00
R8955:Vmn2r57 UTSW 7 41,400,147 (GRCm38) missense possibly damaging 0.64
R8985:Vmn2r57 UTSW 7 41,399,835 (GRCm38) missense probably benign
R9108:Vmn2r57 UTSW 7 41,428,768 (GRCm38) missense possibly damaging 0.87
R9160:Vmn2r57 UTSW 7 41,426,735 (GRCm38) missense possibly damaging 0.48
R9354:Vmn2r57 UTSW 7 41,400,239 (GRCm38) missense probably benign 0.01
R9566:Vmn2r57 UTSW 7 41,427,665 (GRCm38) missense probably benign 0.32
R9633:Vmn2r57 UTSW 7 41,426,582 (GRCm38) missense probably benign 0.00
X0026:Vmn2r57 UTSW 7 41,428,561 (GRCm38) missense possibly damaging 0.91
X0026:Vmn2r57 UTSW 7 41,428,125 (GRCm38) missense probably benign 0.03
X0065:Vmn2r57 UTSW 7 41,427,971 (GRCm38) missense probably benign 0.09
Z1176:Vmn2r57 UTSW 7 41,400,498 (GRCm38) missense probably damaging 0.99
Posted On 2016-08-02