Incidental Mutation 'IGL03010:Ghrhr'
| ID |
407728 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Ghrhr
|
| Ensembl Gene |
ENSMUSG00000004654 |
| Gene Name |
growth hormone releasing hormone receptor |
| Synonyms |
Ghrfr |
| Accession Numbers |
|
| Essential gene? |
Non essential
(E-score: 0.000)
|
| Stock # |
IGL03010
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
6 |
| Chromosomal Location |
55353280-55365515 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
T to C
at 55361742 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Isoleucine to Threonine
at position 303
(I303T)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000145224
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000063578]
[ENSMUST00000203241]
|
| AlphaFold |
P32082 |
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000063578
AA Change: I303T
PolyPhen 2
Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
|
| SMART Domains |
Protein: ENSMUSP00000068120
Gene: ENSMUSG00000004654
AA Change: I303T
| Domain | Start | End | E-Value | Type |
|---|
|
HormR
|
51 |
121 |
1.3e-26 |
SMART |
|
Pfam:7tm_2
|
126 |
372 |
7.2e-76 |
PFAM |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000203241
AA Change: I303T
PolyPhen 2
Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
|
| SMART Domains |
Protein: ENSMUSP00000145224
Gene: ENSMUSG00000004654
AA Change: I303T
| Domain | Start | End | E-Value | Type |
|---|
|
signal peptide
|
1 |
22 |
N/A |
INTRINSIC |
|
HormR
|
51 |
121 |
8.4e-29 |
SMART |
|
Pfam:7tm_2
|
126 |
374 |
8.7e-59 |
PFAM |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000204988
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a receptor for growth hormone-releasing hormone. Binding of this hormone to the receptor leads to synthesis and release of growth hormone. Mutations in this gene have been associated with isolated growth hormone deficiency (IGHD), also known as Dwarfism of Sindh, a disorder characterized by short stature. [provided by RefSeq, Jun 2010]
PHENOTYPE: Homozygotes for a spontaneous null mutation exhibit reduced growth from 2 weeks of age, impaired growth hormone synthesis and release, obesity, decreased bone mass, reduced fertility in males, impaired first lactations, and extended life span. [provided by MGI curators]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 37 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Acvr1b |
A |
G |
15: 101,100,959 (GRCm39) |
R374G |
probably damaging |
Het |
| Adamts4 |
T |
C |
1: 171,078,985 (GRCm39) |
C202R |
probably damaging |
Het |
| Afap1l1 |
T |
C |
18: 61,876,390 (GRCm39) |
D409G |
probably benign |
Het |
| Atp6v1b2 |
T |
C |
8: 69,558,534 (GRCm39) |
I334T |
probably damaging |
Het |
| Btn2a2 |
A |
T |
13: 23,670,375 (GRCm39) |
Y119* |
probably null |
Het |
| Cct2 |
T |
C |
10: 116,894,019 (GRCm39) |
D245G |
probably damaging |
Het |
| Ercc2 |
A |
G |
7: 19,125,491 (GRCm39) |
K486E |
possibly damaging |
Het |
| Fam186b |
T |
C |
15: 99,178,508 (GRCm39) |
S273G |
possibly damaging |
Het |
| Fbxw24 |
T |
A |
9: 109,452,678 (GRCm39) |
I106L |
probably benign |
Het |
| Habp2 |
T |
C |
19: 56,299,655 (GRCm39) |
|
probably null |
Het |
| Haus3 |
T |
A |
5: 34,323,631 (GRCm39) |
E326D |
probably benign |
Het |
| Hdac7 |
C |
T |
15: 97,691,810 (GRCm39) |
|
probably null |
Het |
| Hectd2 |
T |
A |
19: 36,593,002 (GRCm39) |
D722E |
probably benign |
Het |
| Il20ra |
G |
T |
10: 19,624,960 (GRCm39) |
G80W |
probably damaging |
Het |
| Jag1 |
T |
C |
2: 136,935,118 (GRCm39) |
|
probably benign |
Het |
| Lrp1b |
A |
G |
2: 42,213,618 (GRCm39) |
S65P |
possibly damaging |
Het |
| Lypd2 |
A |
G |
15: 74,606,102 (GRCm39) |
I12T |
probably benign |
Het |
| Nat2 |
T |
A |
8: 67,954,664 (GRCm39) |
L258Q |
probably damaging |
Het |
| Nwd1 |
T |
C |
8: 73,414,688 (GRCm39) |
|
probably benign |
Het |
| Or2y1b |
T |
A |
11: 49,208,973 (GRCm39) |
V200E |
probably damaging |
Het |
| Or5ac24 |
A |
G |
16: 59,165,135 (GRCm39) |
|
probably benign |
Het |
| Or6c3 |
G |
T |
10: 129,308,843 (GRCm39) |
C94F |
probably damaging |
Het |
| Pcdh15 |
T |
A |
10: 74,221,777 (GRCm39) |
D692E |
probably damaging |
Het |
| Prkcz |
G |
T |
4: 155,371,262 (GRCm39) |
H134N |
probably damaging |
Het |
| Prmt8 |
T |
C |
6: 127,706,498 (GRCm39) |
T98A |
probably benign |
Het |
| Rps6kc1 |
C |
A |
1: 190,643,803 (GRCm39) |
E19* |
probably null |
Het |
| Rrp8 |
A |
G |
7: 105,383,598 (GRCm39) |
S223P |
probably benign |
Het |
| Septin10 |
G |
A |
10: 59,006,777 (GRCm39) |
|
probably benign |
Het |
| Serpinb7 |
T |
C |
1: 107,379,741 (GRCm39) |
|
probably benign |
Het |
| Spaca6 |
C |
A |
17: 18,058,667 (GRCm39) |
Q72K |
probably benign |
Het |
| Spag1 |
A |
G |
15: 36,233,419 (GRCm39) |
H712R |
probably benign |
Het |
| Spg11 |
C |
A |
2: 121,918,801 (GRCm39) |
A943S |
probably damaging |
Het |
| Tmem104 |
T |
C |
11: 115,134,360 (GRCm39) |
S298P |
probably benign |
Het |
| Ttn |
A |
G |
2: 76,565,432 (GRCm39) |
I28265T |
probably damaging |
Het |
| Usp33 |
G |
T |
3: 152,074,233 (GRCm39) |
V360F |
probably benign |
Het |
| Vmn2r113 |
A |
G |
17: 23,175,038 (GRCm39) |
T550A |
possibly damaging |
Het |
| Zscan4d |
A |
T |
7: 10,897,070 (GRCm39) |
V128D |
probably damaging |
Het |
|
| Other mutations in Ghrhr |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00650:Ghrhr
|
APN |
6 |
55,356,110 (GRCm39) |
missense |
probably benign |
0.00 |
|
IGL01088:Ghrhr
|
APN |
6 |
55,356,178 (GRCm39) |
critical splice donor site |
probably null |
|
|
IGL01567:Ghrhr
|
APN |
6 |
55,361,108 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02351:Ghrhr
|
APN |
6 |
55,361,138 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02358:Ghrhr
|
APN |
6 |
55,361,138 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02588:Ghrhr
|
APN |
6 |
55,360,395 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0068:Ghrhr
|
UTSW |
6 |
55,357,849 (GRCm39) |
splice site |
probably benign |
|
|
R0068:Ghrhr
|
UTSW |
6 |
55,357,849 (GRCm39) |
splice site |
probably benign |
|
|
R0234:Ghrhr
|
UTSW |
6 |
55,356,171 (GRCm39) |
missense |
possibly damaging |
0.47 |
|
R0234:Ghrhr
|
UTSW |
6 |
55,356,171 (GRCm39) |
missense |
possibly damaging |
0.47 |
|
R1173:Ghrhr
|
UTSW |
6 |
55,365,254 (GRCm39) |
nonsense |
probably null |
|
|
R1174:Ghrhr
|
UTSW |
6 |
55,365,254 (GRCm39) |
nonsense |
probably null |
|
|
R1175:Ghrhr
|
UTSW |
6 |
55,365,254 (GRCm39) |
nonsense |
probably null |
|
|
R1613:Ghrhr
|
UTSW |
6 |
55,356,682 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R2196:Ghrhr
|
UTSW |
6 |
55,356,726 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2232:Ghrhr
|
UTSW |
6 |
55,362,444 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R3764:Ghrhr
|
UTSW |
6 |
55,357,756 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R4618:Ghrhr
|
UTSW |
6 |
55,358,739 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4837:Ghrhr
|
UTSW |
6 |
55,365,172 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5422:Ghrhr
|
UTSW |
6 |
55,365,188 (GRCm39) |
missense |
probably benign |
0.00 |
|
R6199:Ghrhr
|
UTSW |
6 |
55,356,173 (GRCm39) |
missense |
probably benign |
0.03 |
|
R6915:Ghrhr
|
UTSW |
6 |
55,360,104 (GRCm39) |
splice site |
probably null |
|
|
R7632:Ghrhr
|
UTSW |
6 |
55,361,727 (GRCm39) |
missense |
probably benign |
0.26 |
|
R7966:Ghrhr
|
UTSW |
6 |
55,356,083 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8874:Ghrhr
|
UTSW |
6 |
55,355,891 (GRCm39) |
missense |
probably benign |
|
|
R9594:Ghrhr
|
UTSW |
6 |
55,362,470 (GRCm39) |
missense |
probably benign |
0.00 |
|
R9608:Ghrhr
|
UTSW |
6 |
55,357,786 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
| Posted On |
2016-08-02 |
Incidental Mutation