Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL03055:Pate2'

409215

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Pate2

Ensembl Gene

ENSMUSG00000074452

Gene Name

prostate and testis expressed 2

Synonyms

LOC330921, mANLP1

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

IGL03055 (G1)

Quality Score

Status

Chromosome

Chromosomal Location

35580935-35584185 bp(+) (GRCm39)

Type of Mutation

splice site

DNA Base Change (assembly)

T to C at 35523069 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000096505 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000034610] [ENSMUST00000098906]

AlphaFold

Q3UW31

Predicted Effect

probably benign
Transcript: ENSMUST00000034610

SMART Domains

Protein: ENSMUSP00000034610
Gene: ENSMUSG00000032099

Domain	Start	End	E-Value	Type
signal peptide	1	23	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000098906

SMART Domains

Protein: ENSMUSP00000096505
Gene: ENSMUSG00000074452

Domain	Start	End	E-Value	Type
signal peptide	1	18	N/A	INTRINSIC

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000137309

Coding Region Coverage

1x: 0.0%
3x: 0.0%
10x: 0.0%
20x: 0.0%

Validation Efficiency

98% (58/59)

Allele List at MGI

Other mutations in this stock

Total: 48 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
2900041M22Rik	T	A	11: 117,503,072 (GRCm39)		noncoding transcript	Het
4933416I08Rik	TCC	TCCC	X: 52,692,862 (GRCm39)		noncoding transcript	Het
A430005L14Rik	T	A	4: 154,045,092 (GRCm39)	S40R	probably benign	Het
Aire	A	G	10: 77,878,903 (GRCm39)	L48P	probably damaging	Het
Alkbh8	T	C	9: 3,345,882 (GRCm39)		probably benign	Het
Aqp7	A	G	4: 41,045,326 (GRCm39)	M18T	probably benign	Het
Cchcr1	T	A	17: 35,837,516 (GRCm39)	M406K	probably benign	Het
Cdhr1	A	T	14: 36,817,054 (GRCm39)	D102E	probably benign	Het
Cilp	TGGG	TGG	9: 65,187,412 (GRCm39)		probably null	Het
Clec16a	T	A	16: 10,559,645 (GRCm39)	S973T	probably damaging	Het
Crb1	CG	C	1: 139,164,824 (GRCm39)		probably null	Het
Csmd1	A	G	8: 16,145,515 (GRCm39)	Y1471H	probably damaging	Het
Dnah12	A	G	14: 26,594,697 (GRCm39)	Y3489C	probably damaging	Het
Ect2	T	C	3: 27,191,211 (GRCm39)	E464G	probably damaging	Het
Enpp2	C	A	15: 54,729,481 (GRCm39)		probably null	Het
Erich2	G	T	2: 70,339,529 (GRCm39)	C28F	possibly damaging	Het
Fam135b	A	T	15: 71,493,883 (GRCm39)	H15Q	possibly damaging	Het
Fcna	G	C	2: 25,520,693 (GRCm39)		probably benign	Het
Gfral	T	A	9: 76,115,831 (GRCm39)	T48S	probably benign	Het
Itga10	A	G	3: 96,557,836 (GRCm39)	E293G	probably damaging	Het
Lrp2	A	T	2: 69,288,792 (GRCm39)	N3691K	probably damaging	Het
Mmp1a	TG	TGG	9: 7,465,083 (GRCm38)		probably null	Het
Nefm	T	C	14: 68,360,358 (GRCm39)	T371A	probably damaging	Het
Nkain3	C	A	4: 20,778,308 (GRCm39)	C3F	probably benign	Het
Nol4l	G	C	2: 153,278,190 (GRCm39)		silent	Het
Nprl3	C	A	11: 32,198,230 (GRCm39)		probably benign	Het
Or52p1	A	T	7: 104,267,413 (GRCm39)	I176F	probably damaging	Het
Pde4d	A	G	13: 110,071,879 (GRCm39)	K128R	probably damaging	Het
Ptprt	A	G	2: 161,375,533 (GRCm39)	L1329P	probably damaging	Het
Rapgef3	T	C	15: 97,647,370 (GRCm39)		probably benign	Het
Rassf5	T	C	1: 131,172,732 (GRCm39)	I46V	probably benign	Het
Rin1	C	T	19: 5,103,187 (GRCm39)	T481I	probably benign	Het
Samd4b	A	G	7: 28,104,971 (GRCm39)	L524P	possibly damaging	Het
Speer4c1	A	C	5: 15,919,214 (GRCm39)		probably benign	Het
Srebf1	T	C	11: 60,097,902 (GRCm39)		silent	Het
Ssh2	C	T	11: 77,299,021 (GRCm39)	Q123*	probably null	Het
St18	G	T	1: 6,872,959 (GRCm39)	L231F	probably damaging	Het
Stk11	A	C	10: 79,963,920 (GRCm39)	D96A	probably damaging	Het
Svil	A	G	18: 5,108,615 (GRCm39)	T1918A	probably damaging	Het
Thrap3	G	A	4: 126,059,335 (GRCm39)		probably null	Het
Tlr1	C	A	5: 65,083,939 (GRCm39)	V213F	probably benign	Het
Trappc10	C	T	10: 78,050,520 (GRCm39)	R307Q	probably damaging	Het
Ugt1a1	AT	A	1: 88,140,093 (GRCm39)		probably null	Het
Wnt6	G	A	1: 74,822,013 (GRCm39)	R198H	probably damaging	Het
Yipf2	A	T	9: 21,501,019 (GRCm39)	V98E	probably benign	Het
Zc3h15	A	G	2: 83,491,515 (GRCm39)	T248A	possibly damaging	Het
Zc3hav1	C	T	6: 38,293,251 (GRCm39)		probably null	Het
Zfp697	T	G	3: 98,332,810 (GRCm39)	C79G	possibly damaging	Het

Other mutations in Pate2

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01475:Pate2	APN	9	35,580,998 (GRCm39)	start codon destroyed	probably null
IGL01729:Pate2	APN	9	35,581,888 (GRCm39)	missense	probably damaging	1.00
foie_gras	UTSW	9	35,581,797 (GRCm39)	nonsense	probably null
PIT4576001:Pate2	UTSW	9	35,581,889 (GRCm39)	missense	probably damaging	1.00
R1229:Pate2	UTSW	9	35,580,991 (GRCm39)	missense	probably damaging	0.98
R1397:Pate2	UTSW	9	35,580,991 (GRCm39)	missense	probably damaging	0.98
R2393:Pate2	UTSW	9	35,581,036 (GRCm39)	splice site	probably benign
R2426:Pate2	UTSW	9	35,581,776 (GRCm39)	critical splice acceptor site	probably null
R3407:Pate2	UTSW	9	35,582,262 (GRCm39)	missense	probably damaging	0.99
R4323:Pate2	UTSW	9	35,581,767 (GRCm39)	splice site	probably benign
R4574:Pate2	UTSW	9	35,596,969 (GRCm39)	intron	probably benign
R4716:Pate2	UTSW	9	35,596,978 (GRCm39)	intron	probably benign
R5023:Pate2	UTSW	9	35,597,407 (GRCm39)	intron	probably benign
R5057:Pate2	UTSW	9	35,597,407 (GRCm39)	intron	probably benign
R5384:Pate2	UTSW	9	35,581,837 (GRCm39)	missense	probably damaging	0.98
R5574:Pate2	UTSW	9	35,597,411 (GRCm39)	intron	probably benign
R5593:Pate2	UTSW	9	35,581,778 (GRCm39)	missense	possibly damaging	0.76
R5851:Pate2	UTSW	9	35,581,797 (GRCm39)	nonsense	probably null
R6510:Pate2	UTSW	9	35,581,018 (GRCm39)	missense	probably null	0.99
R6800:Pate2	UTSW	9	35,596,941 (GRCm39)	intron	probably benign
R6819:Pate2	UTSW	9	35,581,801 (GRCm39)	missense	probably damaging	1.00
R7531:Pate2	UTSW	9	35,582,008 (GRCm39)	splice site	probably null
R7765:Pate2	UTSW	9	35,581,197 (GRCm39)	missense	probably benign	0.15
R7842:Pate2	UTSW	9	35,581,829 (GRCm39)	missense	probably damaging	1.00
R8015:Pate2	UTSW	9	35,581,814 (GRCm39)	missense	probably damaging	0.99
R8957:Pate2	UTSW	9	35,596,911 (GRCm39)	missense	probably benign	0.03
R9126:Pate2	UTSW	9	35,581,908 (GRCm39)	critical splice donor site	probably null

Posted On

2016-08-02