Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL03066:Cd209d'

409717

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Cd209d

Ensembl Gene

ENSMUSG00000031495

Gene Name

CD209d antigen

Synonyms

SIGNR3, mSIGNR3, SIGN-R3

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

IGL03066

Quality Score

Status

Chromosome

Chromosomal Location

3921824-3928548 bp(-) (GRCm39)

Type of Mutation

critical splice donor site (1 bp from exon)

DNA Base Change (assembly)

C to A at 3928437 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000147198 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000011445] [ENSMUST00000209176]

AlphaFold

Q91ZW8

Predicted Effect

probably null
Transcript: ENSMUST00000011445

SMART Domains

Protein: ENSMUSP00000011445
Gene: ENSMUSG00000031495

Domain	Start	End	E-Value	Type
low complexity region	54	74	N/A	INTRINSIC
CLECT	106	227	2.34e-34	SMART

Predicted Effect

probably null
Transcript: ENSMUST00000209176

Coding Region Coverage

Validation Efficiency

MGI Phenotype

PHENOTYPE: Mice homozygous for a knock-out allele exhibit normal susceptibility to bacterial infection despite decreased T and B cell proliferation and extramedullary hematopoiesis in the spleen. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 41 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Brd4	A	C	17: 32,418,062 (GRCm39)		probably benign	Het
Cela2a	T	A	4: 141,548,765 (GRCm39)	I124F	probably damaging	Het
Cemip2	G	A	19: 21,801,207 (GRCm39)	D775N	possibly damaging	Het
Cnot2	A	T	10: 116,335,262 (GRCm39)	N245K	probably benign	Het
Cpt2	A	G	4: 107,765,183 (GRCm39)	F148L	probably benign	Het
Ctsj	A	C	13: 61,152,302 (GRCm39)	H21Q	possibly damaging	Het
Cul4a	A	G	8: 13,183,776 (GRCm39)	N388S	probably benign	Het
Dnah12	A	G	14: 26,418,553 (GRCm39)	D147G	probably benign	Het
Dnhd1	A	G	7: 105,369,089 (GRCm39)	T4287A	probably damaging	Het
Dock10	C	A	1: 80,562,758 (GRCm39)	C534F	probably benign	Het
Efcab14	A	G	4: 115,596,001 (GRCm39)	E49G	probably benign	Het
Fancm	G	T	12: 65,171,888 (GRCm39)	E86*	probably null	Het
Galnt17	A	T	5: 130,929,486 (GRCm39)	S440R	probably benign	Het
Hectd4	T	A	5: 121,503,116 (GRCm39)	Y4362N	possibly damaging	Het
Lctl	T	G	9: 64,025,017 (GRCm39)	M1R	probably null	Het
Llgl1	A	G	11: 60,596,860 (GRCm39)	T154A	possibly damaging	Het
Mink1	G	T	11: 70,499,715 (GRCm39)	V750F	probably benign	Het
Mroh7	A	G	4: 106,549,595 (GRCm39)	V950A	possibly damaging	Het
Myg1	G	A	15: 102,242,801 (GRCm39)		probably benign	Het
Or4x11	A	T	2: 89,867,778 (GRCm39)	I172F	probably damaging	Het
Or6b2b	T	A	1: 92,419,305 (GRCm39)	R57S	probably damaging	Het
Or7d10	A	G	9: 19,831,667 (GRCm39)	H54R	probably benign	Het
Pask	A	T	1: 93,258,588 (GRCm39)	S253R	probably benign	Het
Pkd1	C	A	17: 24,805,208 (GRCm39)	H3253Q	probably damaging	Het
Pkd1l2	G	A	8: 117,792,484 (GRCm39)	T436I	probably benign	Het
Rapgef4	A	G	2: 71,971,523 (GRCm39)		probably benign	Het
Rnf169	G	T	7: 99,574,760 (GRCm39)	R612S	possibly damaging	Het
Sclt1	A	T	3: 41,672,278 (GRCm39)	D104E	probably benign	Het
Shh	G	T	5: 28,666,369 (GRCm39)	D172E	probably damaging	Het
Sil1	G	T	18: 35,402,259 (GRCm39)		probably benign	Het
Slc19a3	A	G	1: 82,992,557 (GRCm39)	I388T	probably damaging	Het
Spink5	A	G	18: 44,149,457 (GRCm39)	Y946C	probably damaging	Het
Sulf1	A	T	1: 12,878,168 (GRCm39)	I219F	probably damaging	Het
Tcf3	T	C	10: 80,248,879 (GRCm39)	D529G	probably damaging	Het
Txnip	G	A	3: 96,466,934 (GRCm39)	E203K	probably damaging	Het
Ubc	G	T	5: 125,465,327 (GRCm39)		probably benign	Het
Ubxn4	A	T	1: 128,188,591 (GRCm39)		probably null	Het
Usp16	T	C	16: 87,268,721 (GRCm39)	V284A	probably damaging	Het
Vmn2r6	T	A	3: 64,472,574 (GRCm39)	N49I	probably damaging	Het
Ythdf1	A	T	2: 180,553,339 (GRCm39)	I292N	probably damaging	Het
Zfp128	A	G	7: 12,624,044 (GRCm39)	I137M	probably benign	Het

Other mutations in Cd209d

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01634:Cd209d	APN	8	3,927,974 (GRCm39)	splice site	probably null
IGL01707:Cd209d	APN	8	3,928,296 (GRCm39)	missense	probably benign
IGL02864:Cd209d	APN	8	3,927,122 (GRCm39)	missense	probably benign	0.08
IGL03297:Cd209d	APN	8	3,928,476 (GRCm39)	missense	possibly damaging	0.92
R0324:Cd209d	UTSW	8	3,928,258 (GRCm39)	missense	probably benign	0.31
R1335:Cd209d	UTSW	8	3,922,027 (GRCm39)	missense	probably damaging	1.00
R1349:Cd209d	UTSW	8	3,928,515 (GRCm39)	unclassified	probably benign
R1372:Cd209d	UTSW	8	3,928,515 (GRCm39)	unclassified	probably benign
R1507:Cd209d	UTSW	8	3,928,453 (GRCm39)	missense	possibly damaging	0.72
R1673:Cd209d	UTSW	8	3,927,113 (GRCm39)	missense	probably damaging	1.00
R2393:Cd209d	UTSW	8	3,928,436 (GRCm39)	critical splice donor site	probably null
R2567:Cd209d	UTSW	8	3,926,327 (GRCm39)	missense	probably damaging	1.00
R4907:Cd209d	UTSW	8	3,927,948 (GRCm39)	missense	probably benign	0.01
R5349:Cd209d	UTSW	8	3,928,320 (GRCm39)	missense	probably benign	0.00
R5768:Cd209d	UTSW	8	3,921,968 (GRCm39)	missense	probably benign	0.05
R5949:Cd209d	UTSW	8	3,927,949 (GRCm39)	missense	possibly damaging	0.50
R5953:Cd209d	UTSW	8	3,927,979 (GRCm39)	splice site	probably null
R6103:Cd209d	UTSW	8	3,928,304 (GRCm39)	missense	probably damaging	1.00
R7382:Cd209d	UTSW	8	3,927,965 (GRCm39)	nonsense	probably null
R8714:Cd209d	UTSW	8	3,923,772 (GRCm39)	frame shift	probably null
R8715:Cd209d	UTSW	8	3,923,772 (GRCm39)	frame shift	probably null
R8716:Cd209d	UTSW	8	3,923,772 (GRCm39)	frame shift	probably null
R9672:Cd209d	UTSW	8	3,922,036 (GRCm39)	missense	probably damaging	1.00
R9784:Cd209d	UTSW	8	3,926,337 (GRCm39)	missense	probably damaging	1.00
X0025:Cd209d	UTSW	8	3,927,961 (GRCm39)	nonsense	probably null

Posted On

2016-08-02