Incidental Mutation 'IGL03069:Dtd1'
ID 409847
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Dtd1
Ensembl Gene ENSMUSG00000027430
Gene Name D-tyrosyl-tRNA deacylase 1
Synonyms Hars2, 0610006H08Rik
Accession Numbers
Essential gene? Possibly non essential (E-score: 0.323) question?
Stock # IGL03069
Quality Score
Status
Chromosome 2
Chromosomal Location 144441873-144610667 bp(+) (GRCm39)
Type of Mutation utr 3 prime
DNA Base Change (assembly) T to A at 144588981 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000028917 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000028917]
AlphaFold Q9DD18
Predicted Effect probably benign
Transcript: ENSMUST00000028917
SMART Domains Protein: ENSMUSP00000028917
Gene: ENSMUSG00000027430

DomainStartEndE-ValueType
Pfam:Tyr_Deacylase 2 146 1.5e-53 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000125683
Predicted Effect noncoding transcript
Transcript: ENSMUST00000137406
Predicted Effect noncoding transcript
Transcript: ENSMUST00000145602
Predicted Effect noncoding transcript
Transcript: ENSMUST00000145814
Coding Region Coverage
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene is similar in sequence to histidyl-tRNA synthetase, which hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). The encoded protein binds the DNA unwinding element and plays a role in the initiation of DNA replication. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Dec 2015]
Allele List at MGI
Other mutations in this stock
Total: 47 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
1700029H14Rik T G 8: 13,607,704 (GRCm39) probably null Het
Acp3 T C 9: 104,197,204 (GRCm39) E145G possibly damaging Het
Ankrd28 T A 14: 31,477,743 (GRCm39) K42* probably null Het
Arsg A T 11: 109,454,082 (GRCm39) K429N probably damaging Het
Bsn G A 9: 107,991,462 (GRCm39) T1430I probably damaging Het
Calu A G 6: 29,356,582 (GRCm39) D36G possibly damaging Het
Ccdc18 T C 5: 108,376,767 (GRCm39) S1403P probably damaging Het
Cdca2 A G 14: 67,952,385 (GRCm39) probably benign Het
Cfh C A 1: 140,026,793 (GRCm39) probably benign Het
Cyp2c69 C T 19: 39,869,537 (GRCm39) G161S probably benign Het
Dennd4c C A 4: 86,692,674 (GRCm39) Y61* probably null Het
Diaph3 A G 14: 87,009,555 (GRCm39) S1075P probably damaging Het
Dpp7 T A 2: 25,245,735 (GRCm39) probably null Het
Dtl C A 1: 191,289,008 (GRCm39) probably benign Het
Exoc3l4 A G 12: 111,390,457 (GRCm39) D344G probably damaging Het
Hsp90ab1 A T 17: 45,879,954 (GRCm39) C159S possibly damaging Het
Kcnip2 T C 19: 45,784,710 (GRCm39) probably benign Het
Krba1 A G 6: 48,391,483 (GRCm39) T755A possibly damaging Het
L2hgdh C T 12: 69,739,173 (GRCm39) V433I probably benign Het
Lamc1 A T 1: 153,115,127 (GRCm39) L1050I probably damaging Het
Lgals4 A T 7: 28,540,343 (GRCm39) I213L probably benign Het
Lysmd1 A G 3: 95,044,945 (GRCm39) I64V probably damaging Het
Mfsd4b4 A C 10: 39,768,311 (GRCm39) C261G probably benign Het
Mrgprb3 T A 7: 48,293,198 (GRCm39) I118F possibly damaging Het
Mtmr2 T A 9: 13,704,501 (GRCm39) Y137* probably null Het
Ofcc1 A T 13: 40,226,140 (GRCm39) H797Q probably benign Het
Omd A T 13: 49,745,870 (GRCm39) probably benign Het
Or5d46 C T 2: 88,170,643 (GRCm39) probably null Het
Or8g21 A T 9: 38,906,728 (GRCm39) M1K probably null Het
Polr3a T A 14: 24,511,808 (GRCm39) D916V probably damaging Het
Prpf38a T C 4: 108,432,628 (GRCm39) Y117C probably damaging Het
Scn11a C T 9: 119,619,029 (GRCm39) G771D probably benign Het
Smarca4 C T 9: 21,547,132 (GRCm39) T219I probably benign Het
Snx1 T A 9: 66,001,906 (GRCm39) I306F probably benign Het
Snx31 T A 15: 36,525,749 (GRCm39) R317* probably null Het
Sorl1 T C 9: 41,902,722 (GRCm39) T1612A probably benign Het
Spag1 G T 15: 36,224,245 (GRCm39) probably benign Het
Stambp A G 6: 83,538,914 (GRCm39) F162S probably damaging Het
Tkfc T A 19: 10,576,518 (GRCm39) M122L probably benign Het
Tnni3k T A 3: 154,647,242 (GRCm39) probably null Het
Trim56 T C 5: 137,142,616 (GRCm39) Q300R probably damaging Het
Ttc24 T A 3: 87,977,408 (GRCm39) T113S probably benign Het
Xirp2 A T 2: 67,339,876 (GRCm39) T706S possibly damaging Het
Yipf5 T A 18: 40,339,290 (GRCm39) probably benign Het
Zfp202 T C 9: 40,122,695 (GRCm39) S486P probably damaging Het
Zfp407 A G 18: 84,369,100 (GRCm39) S1676P probably damaging Het
Znrd2 G T 19: 5,780,450 (GRCm39) L183I possibly damaging Het
Other mutations in Dtd1
AlleleSourceChrCoordTypePredicted EffectPPH Score
R0039:Dtd1 UTSW 2 144,588,896 (GRCm39) missense probably damaging 0.98
R1567:Dtd1 UTSW 2 144,588,945 (GRCm39) missense probably damaging 1.00
R2286:Dtd1 UTSW 2 144,477,786 (GRCm39) critical splice donor site probably null
R5307:Dtd1 UTSW 2 144,588,942 (GRCm39) missense possibly damaging 0.90
R7511:Dtd1 UTSW 2 144,459,147 (GRCm39) missense probably benign 0.22
R8013:Dtd1 UTSW 2 144,459,252 (GRCm39) missense probably damaging 1.00
R8821:Dtd1 UTSW 2 144,459,261 (GRCm39) missense probably benign 0.32
R9124:Dtd1 UTSW 2 144,445,798 (GRCm39) missense possibly damaging 0.74
Posted On 2016-08-02