Incidental Mutation 'IGL03118:Fcnb'
ID |
409881 |
Institutional Source |
Australian Phenomics Network
(link to record)
|
Gene Symbol |
Fcnb
|
Ensembl Gene |
ENSMUSG00000026835 |
Gene Name |
ficolin B |
Synonyms |
|
Accession Numbers |
|
Essential gene? |
Non essential
(E-score: 0.000)
|
Stock # |
IGL03118
|
Quality Score |
|
Status
|
|
Chromosome |
2 |
Chromosomal Location |
27966491-27974921 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
T to C
at 27966630 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Asparagine to Serine
at position 301
(N301S)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000028179
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000028179]
[ENSMUST00000117486]
[ENSMUST00000135472]
|
AlphaFold |
O70497 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000028179
AA Change: N301S
PolyPhen 2
Score 0.061 (Sensitivity: 0.94; Specificity: 0.84)
|
SMART Domains |
Protein: ENSMUSP00000028179 Gene: ENSMUSG00000026835 AA Change: N301S
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
17 |
N/A |
INTRINSIC |
Pfam:Collagen
|
39 |
99 |
1.1e-11 |
PFAM |
FBG
|
101 |
314 |
1.78e-115 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000117486
|
SMART Domains |
Protein: ENSMUSP00000112625 Gene: ENSMUSG00000026835
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
17 |
N/A |
INTRINSIC |
Pfam:Collagen
|
39 |
99 |
6.7e-12 |
PFAM |
FBG
|
101 |
250 |
1.33e-41 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000135472
|
SMART Domains |
Protein: ENSMUSP00000119098 Gene: ENSMUSG00000026835
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
17 |
N/A |
INTRINSIC |
Pfam:Collagen
|
38 |
81 |
5.3e-10 |
PFAM |
internal_repeat_1
|
86 |
107 |
1.19e-5 |
PROSPERO |
|
Coding Region Coverage |
|
Validation Efficiency |
|
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The ficolin family of proteins are characterized by the presence of a leader peptide, a short N-terminal segment, followed by a collagen-like region, and a C-terminal fibrinogen-like domain. The collagen-like and the fibrinogen-like domains are also found separately in other proteins such as complement protein C1q, C-type lectins known as collectins, and tenascins. However, all these proteins recognize different targets, and are functionally distinct. Ficolin 1 encoded by FCN1 is predominantly expressed in the peripheral blood leukocytes, and has been postulated to function as a plasma protein with elastin-binding activity. [provided by RefSeq, Jul 2008] PHENOTYPE: Mice homozygous for a knock-out allele exhibit increased susceptibility to Streptococcus pneumoniae infection. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 43 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Abca3 |
G |
A |
17: 24,619,424 (GRCm39) |
G921S |
probably benign |
Het |
Abca8b |
T |
C |
11: 109,838,007 (GRCm39) |
T1082A |
possibly damaging |
Het |
B9d2 |
T |
C |
7: 25,380,901 (GRCm39) |
|
probably null |
Het |
Bfsp1 |
T |
C |
2: 143,669,253 (GRCm39) |
E442G |
possibly damaging |
Het |
Bpifb5 |
C |
T |
2: 154,078,673 (GRCm39) |
|
probably benign |
Het |
Ccl1 |
A |
G |
11: 82,068,896 (GRCm39) |
I47T |
probably damaging |
Het |
Cln3 |
T |
C |
7: 126,174,569 (GRCm39) |
I285V |
probably null |
Het |
Cyp4a12b |
G |
T |
4: 115,290,173 (GRCm39) |
R242I |
possibly damaging |
Het |
Dcc |
T |
C |
18: 71,553,344 (GRCm39) |
T771A |
probably benign |
Het |
Erbb4 |
T |
C |
1: 68,081,878 (GRCm39) |
D1052G |
probably benign |
Het |
Gm28043 |
A |
C |
17: 29,853,705 (GRCm39) |
E403A |
probably damaging |
Het |
Gria4 |
A |
G |
9: 4,793,804 (GRCm39) |
|
probably benign |
Het |
Ighv5-12 |
T |
A |
12: 113,666,198 (GRCm39) |
M1L |
probably benign |
Het |
Il17rd |
A |
G |
14: 26,815,352 (GRCm39) |
|
probably null |
Het |
Kcnn3 |
T |
A |
3: 89,574,468 (GRCm39) |
L660Q |
probably damaging |
Het |
Lcor |
C |
T |
19: 41,546,808 (GRCm39) |
P131S |
probably damaging |
Het |
Leng1 |
T |
C |
7: 3,668,409 (GRCm39) |
N13S |
probably damaging |
Het |
Loxhd1 |
T |
C |
18: 77,468,160 (GRCm39) |
V827A |
probably damaging |
Het |
Mapk13 |
A |
G |
17: 28,996,709 (GRCm39) |
Y208C |
probably benign |
Het |
Mybpc3 |
T |
C |
2: 90,954,848 (GRCm39) |
V453A |
probably damaging |
Het |
Odam |
T |
C |
5: 88,033,613 (GRCm39) |
S15P |
unknown |
Het |
Or11l3 |
A |
T |
11: 58,516,269 (GRCm39) |
V201D |
probably damaging |
Het |
Or8d1 |
A |
T |
9: 38,766,526 (GRCm39) |
H56L |
probably damaging |
Het |
Pcdhb19 |
T |
C |
18: 37,632,618 (GRCm39) |
|
probably benign |
Het |
Per2 |
G |
T |
1: 91,372,341 (GRCm39) |
Y244* |
probably null |
Het |
Pik3ca |
A |
T |
3: 32,514,084 (GRCm39) |
I857F |
probably damaging |
Het |
Pold1 |
T |
A |
7: 44,188,824 (GRCm39) |
I447F |
probably benign |
Het |
Ppm1f |
T |
A |
16: 16,731,942 (GRCm39) |
W131R |
probably null |
Het |
Ppp2r2c |
A |
G |
5: 37,083,660 (GRCm39) |
Y67C |
probably damaging |
Het |
Psmb10 |
A |
T |
8: 106,663,532 (GRCm39) |
H155Q |
probably damaging |
Het |
Ptbp3 |
G |
A |
4: 59,501,470 (GRCm39) |
A149V |
probably benign |
Het |
Pygb |
T |
A |
2: 150,662,731 (GRCm39) |
V566E |
probably benign |
Het |
Rictor |
G |
A |
15: 6,788,999 (GRCm39) |
R205Q |
possibly damaging |
Het |
Ryr1 |
T |
A |
7: 28,715,211 (GRCm39) |
R4638W |
unknown |
Het |
Semp2l2a |
C |
T |
8: 13,888,096 (GRCm39) |
|
probably benign |
Het |
Septin3 |
G |
A |
15: 82,168,715 (GRCm39) |
|
probably null |
Het |
Serpina3b |
A |
T |
12: 104,097,313 (GRCm39) |
D198V |
probably benign |
Het |
Slc27a6 |
C |
A |
18: 58,689,815 (GRCm39) |
H94N |
probably benign |
Het |
Taf2 |
C |
T |
15: 54,915,559 (GRCm39) |
V456M |
probably damaging |
Het |
Tbpl2 |
T |
C |
2: 23,977,301 (GRCm39) |
E238G |
probably benign |
Het |
Ttn |
C |
T |
2: 76,584,551 (GRCm39) |
V20440I |
possibly damaging |
Het |
Zfp638 |
T |
A |
6: 83,912,000 (GRCm39) |
|
probably benign |
Het |
Zfp865 |
T |
C |
7: 5,037,644 (GRCm39) |
|
probably benign |
Het |
|
Other mutations in Fcnb |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00092:Fcnb
|
APN |
2 |
27,966,813 (GRCm39) |
missense |
probably benign |
0.04 |
IGL02130:Fcnb
|
APN |
2 |
27,974,801 (GRCm39) |
critical splice donor site |
probably null |
|
IGL02348:Fcnb
|
APN |
2 |
27,974,842 (GRCm39) |
missense |
possibly damaging |
0.88 |
IGL02504:Fcnb
|
APN |
2 |
27,966,606 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03179:Fcnb
|
APN |
2 |
27,966,646 (GRCm39) |
missense |
possibly damaging |
0.93 |
R0217:Fcnb
|
UTSW |
2 |
27,969,689 (GRCm39) |
missense |
probably benign |
0.02 |
R0899:Fcnb
|
UTSW |
2 |
27,966,791 (GRCm39) |
missense |
probably damaging |
1.00 |
R3901:Fcnb
|
UTSW |
2 |
27,969,208 (GRCm39) |
missense |
probably damaging |
1.00 |
R5845:Fcnb
|
UTSW |
2 |
27,969,633 (GRCm39) |
critical splice donor site |
probably null |
|
R5911:Fcnb
|
UTSW |
2 |
27,966,701 (GRCm39) |
missense |
probably damaging |
1.00 |
R6065:Fcnb
|
UTSW |
2 |
27,969,922 (GRCm39) |
missense |
probably damaging |
1.00 |
R6188:Fcnb
|
UTSW |
2 |
27,969,202 (GRCm39) |
missense |
possibly damaging |
0.94 |
R6488:Fcnb
|
UTSW |
2 |
27,968,301 (GRCm39) |
missense |
probably damaging |
1.00 |
R8058:Fcnb
|
UTSW |
2 |
27,969,707 (GRCm39) |
missense |
probably damaging |
1.00 |
R8194:Fcnb
|
UTSW |
2 |
27,968,330 (GRCm39) |
missense |
possibly damaging |
0.65 |
R8195:Fcnb
|
UTSW |
2 |
27,968,330 (GRCm39) |
missense |
possibly damaging |
0.65 |
R8196:Fcnb
|
UTSW |
2 |
27,968,330 (GRCm39) |
missense |
possibly damaging |
0.65 |
R8198:Fcnb
|
UTSW |
2 |
27,968,330 (GRCm39) |
missense |
possibly damaging |
0.65 |
R8199:Fcnb
|
UTSW |
2 |
27,968,330 (GRCm39) |
missense |
possibly damaging |
0.65 |
R8678:Fcnb
|
UTSW |
2 |
27,968,361 (GRCm39) |
missense |
possibly damaging |
0.61 |
R9224:Fcnb
|
UTSW |
2 |
27,969,160 (GRCm39) |
missense |
probably damaging |
1.00 |
R9261:Fcnb
|
UTSW |
2 |
27,969,636 (GRCm39) |
missense |
probably damaging |
0.99 |
X0024:Fcnb
|
UTSW |
2 |
27,966,703 (GRCm39) |
missense |
probably damaging |
0.99 |
|
Posted On |
2016-08-02 |